RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 DHX29Q7Z478 1369 aaKnown RBP24.38■■□□□ 1.49
PFDN4-204ENST00000487129 POLR1AO95602 1720 aaPredicted RBP24.38■■□□□ 1.49
PFDN4-204ENST00000487129 ALKQ9UM73 1620 aa24.36■■□□□ 1.49
PFDN4-204ENST00000487129 FBXO31Q5XUX0 539 aaPredicted RBP24.36■■□□□ 1.49
PFDN4-204ENST00000487129 MTUS2Q5JR59 1369 aa24.36■■□□□ 1.49
PFDN4-204ENST00000487129 SHANK2Q9UPX8 1470 aa24.36■■□□□ 1.49
PFDN4-204ENST00000487129 PZPP20742 1482 aa24.35■■□□□ 1.49
PFDN4-204ENST00000487129 TNRQ92752 1358 aa24.35■■□□□ 1.49
PFDN4-204ENST00000487129 VWDEQ8N2E2 1590 aa24.34■■□□□ 1.49
PFDN4-204ENST00000487129 KDM5DQ9BY66 1539 aa24.32■■□□□ 1.48
PFDN4-204ENST00000487129 FAM135AQ9P2D6 1515 aa24.32■■□□□ 1.48
PFDN4-204ENST00000487129 PIP4K2BP78356 416 aa24.31■■□□□ 1.48
PFDN4-204ENST00000487129 EHBP1L1Q8N3D4 1523 aa24.3■■□□□ 1.48
PFDN4-204ENST00000487129 CEP162Q5TB80 1403 aa24.29■■□□□ 1.48
PFDN4-204ENST00000487129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.29■■□□□ 1.48
PFDN4-204ENST00000487129 MED14O60244 1454 aa24.28■■□□□ 1.48
PFDN4-204ENST00000487129 TOM1O60784 492 aa24.28■■□□□ 1.48
PFDN4-204ENST00000487129 SCAF1Q9H7N4 1312 aaKnown RBP24.28■■□□□ 1.48
PFDN4-204ENST00000487129 KIF3BO15066 747 aa24.27■■□□□ 1.48
PFDN4-204ENST00000487129 MIA2Q96PC5 1412 aa24.26■■□□□ 1.47
PFDN4-204ENST00000487129 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
PFDN4-204ENST00000487129 DEPDC5O75140 1603 aa24.25■■□□□ 1.47
PFDN4-204ENST00000487129 NLRP1Q9C000 1473 aa24.25■■□□□ 1.47
PFDN4-204ENST00000487129 ANKLE2Q86XL3 938 aa24.23■■□□□ 1.47
PFDN4-204ENST00000487129 NPHP4O75161 1426 aaPredicted RBP24.23■■□□□ 1.47
PFDN4-204ENST00000487129 UGGT1Q9NYU2 1555 aa24.22■■□□□ 1.47
PFDN4-204ENST00000487129 CAMSAP2Q08AD1 1489 aa24.21■■□□□ 1.47
PFDN4-204ENST00000487129 WASHC2CQ9Y4E1 1318 aa24.2■■□□□ 1.46
PFDN4-204ENST00000487129 STRCP1A6NGW2 1772 aa24.19■■□□□ 1.46
PFDN4-204ENST00000487129 THEMISQ8N1K5 641 aaPredicted RBP24.19■■□□□ 1.46
PFDN4-204ENST00000487129 NCOA2Q15596 1464 aa24.17■■□□□ 1.46
PFDN4-204ENST00000487129 IQGAP1P46940 1657 aa24.17■■□□□ 1.46
PFDN4-204ENST00000487129 LRRC7Q96NW7 1537 aa24.16■■□□□ 1.46
PFDN4-204ENST00000487129 ARHGEF5Q12774 1597 aa24.14■■□□□ 1.45
PFDN4-204ENST00000487129 RNF17Q9BXT8 1623 aaKnown RBP24.13■■□□□ 1.45
PFDN4-204ENST00000487129 ABCC3O15438 1527 aa24.13■■□□□ 1.45
PFDN4-204ENST00000487129 RSPH4AQ5TD94 716 aa24.12■■□□□ 1.45
PFDN4-204ENST00000487129 SYNMO15061 1565 aa24.11■■□□□ 1.45
PFDN4-204ENST00000487129 ZC3H13Q5T200 1668 aaKnown RBP24.1■■□□□ 1.45
PFDN4-204ENST00000487129 ERVK-7P63135 1459 aa24.09■■□□□ 1.45
PFDN4-204ENST00000487129 MROH1Q8NDA8 1641 aa24.09■■□□□ 1.45
PFDN4-204ENST00000487129 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
PFDN4-204ENST00000487129 MAST1Q9Y2H9 1570 aa24.05■■□□□ 1.44
PFDN4-204ENST00000487129 UBR1Q8IWV7 1749 aa24.03■■□□□ 1.44
PFDN4-204ENST00000487129 EIF2AK4Q9P2K8 1649 aaKnown RBP24.02■■□□□ 1.44
PFDN4-204ENST00000487129 RGS17Q9UGC6 210 aaPredicted RBP24.02■■□□□ 1.44
PFDN4-204ENST00000487129 ARHGAP23Q9P227 1491 aa24.01■■□□□ 1.43
PFDN4-204ENST00000487129 TSPY4P0CV99 314 aa24■■□□□ 1.43
PFDN4-204ENST00000487129 TSPY10P0CW01 314 aa24■■□□□ 1.43
PFDN4-204ENST00000487129 SCAF11Q99590 1463 aaKnown RBP24■■□□□ 1.43
PFDN4-204ENST00000487129 SLIT1O75093 1534 aa23.98■■□□□ 1.43
PFDN4-204ENST00000487129 XIRP1Q702N8 1843 aaKnown RBP23.98■■□□□ 1.43
PFDN4-204ENST00000487129 CEP152O94986 1710 aa23.97■■□□□ 1.43
PFDN4-204ENST00000487129 LTKP29376 864 aa23.97■■□□□ 1.43
PFDN4-204ENST00000487129 LRRC9Q6ZRR7 1453 aa23.93■■□□□ 1.42
PFDN4-204ENST00000487129 ARHGAP31Q2M1Z3 1444 aa23.92■■□□□ 1.42
PFDN4-204ENST00000487129 PRDM15P57071 1507 aaPredicted RBP23.9■■□□□ 1.42
PFDN4-204ENST00000487129 DUOX2Q9NRD8 1548 aa23.89■■□□□ 1.41
PFDN4-204ENST00000487129 TXNDC2Q86VQ3 553 aa23.88■■□□□ 1.41
PFDN4-204ENST00000487129 CFAP65Q6ZU64 1925 aaKnown RBP23.88■■□□□ 1.41
PFDN4-204ENST00000487129 FAM135BQ49AJ0 1406 aa23.87■■□□□ 1.41
PFDN4-204ENST00000487129 PIK3C2BO00750 1634 aa23.84■■□□□ 1.41
PFDN4-204ENST00000487129 TMEM2Q9UHN6 1383 aa23.84■■□□□ 1.41
PFDN4-204ENST00000487129 MYOM3Q5VTT5 1437 aa23.84■■□□□ 1.41
PFDN4-204ENST00000487129 KANK4Q5T7N3 995 aaPredicted RBP23.83■■□□□ 1.41
PFDN4-204ENST00000487129 MAP3K1Q13233 1512 aa23.83■■□□□ 1.41
PFDN4-204ENST00000487129 VPS8Q8N3P4 1428 aa23.83■■□□□ 1.4
PFDN4-204ENST00000487129 POTEAQ6S8J7 498 aa23.82■■□□□ 1.4
PFDN4-204ENST00000487129 TMEM94Q12767 1356 aa23.8■■□□□ 1.4
PFDN4-204ENST00000487129 KIF15Q9NS87 1388 aa23.8■■□□□ 1.4
PFDN4-204ENST00000487129 ERBINQ96RT1 1412 aa23.8■■□□□ 1.4
PFDN4-204ENST00000487129 TET3O43151 1660 aa23.79■■□□□ 1.4
PFDN4-204ENST00000487129 EID1Q9Y6B2 187 aa23.78■■□□□ 1.4
PFDN4-204ENST00000487129 KDM5AP29375 1690 aaKnown RBP23.78■■□□□ 1.4
PFDN4-204ENST00000487129 ABCC5O15440 1437 aa23.77■■□□□ 1.4
PFDN4-204ENST00000487129 ROBO1Q9Y6N7 1651 aa23.77■■□□□ 1.4
PFDN4-204ENST00000487129 CROCC2H7BZ55 1655 aa23.76■■□□□ 1.39
PFDN4-204ENST00000487129 EFCAB6Q5THR3 1501 aa23.76■■□□□ 1.39
PFDN4-204ENST00000487129 KCNA6P17658 529 aa23.74■■□□□ 1.39
PFDN4-204ENST00000487129 LMTK2Q8IWU2 1503 aa23.74■■□□□ 1.39
PFDN4-204ENST00000487129 IDI1Q13907 227 aa23.73■■□□□ 1.39
PFDN4-204ENST00000487129 NWD1Q149M9 1564 aa23.73■■□□□ 1.39
PFDN4-204ENST00000487129 RRP7BPQ9NSQ0 103 aa23.72■■□□□ 1.39
PFDN4-204ENST00000487129 RBM33Q96EV2 1170 aaKnown RBP23.71■■□□□ 1.39
PFDN4-204ENST00000487129 NKTRP30414 1462 aaKnown RBP23.7■■□□□ 1.38
PFDN4-204ENST00000487129 SLC26A8Q96RN1 970 aa23.7■■□□□ 1.38
PFDN4-204ENST00000487129 NOS1P29475 1434 aa23.69■■□□□ 1.38
PFDN4-204ENST00000487129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.68■■□□□ 1.383e-7■■□□□ 11.7
PFDN4-204ENST00000487129 ADGRB3O60242 1522 aa23.67■■□□□ 1.38
PFDN4-204ENST00000487129 DAPK1P53355 1430 aa23.67■■□□□ 1.38
PFDN4-204ENST00000487129 PTPN23Q9H3S7 1636 aa23.66■■□□□ 1.38
PFDN4-204ENST00000487129 PROSER2Q86WR7 435 aaPredicted RBP23.66■■□□□ 1.38
PFDN4-204ENST00000487129 STAG3Q9UJ98 1225 aa23.65■■□□□ 1.38
PFDN4-204ENST00000487129 SETD1AO15047 1707 aaKnown RBP23.64■■□□□ 1.38
PFDN4-204ENST00000487129 KANK1Q14678 1352 aa23.63■■□□□ 1.37
PFDN4-204ENST00000487129 ZFYVE9O95405 1425 aa23.6■■□□□ 1.37
PFDN4-204ENST00000487129 COL16A1Q07092 1604 aaPredicted RBP23.59■■□□□ 1.37
PFDN4-204ENST00000487129 PHLPP1O60346 1717 aa23.59■■□□□ 1.37
PFDN4-204ENST00000487129 SLAIN2Q9P270 581 aa23.59■■□□□ 1.37
PFDN4-204ENST00000487129 MSH6P52701 1360 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms