RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 ZNF326Q5BKZ1 582 aaKnown RBP23.41■■□□□ 1.34
FDPS-212ENST00000487002 RTEL1-TNFRSF6BF6WH68 1400 aa23.41■■□□□ 1.34
FDPS-212ENST00000487002 LAMC1P11047 1609 aa23.41■■□□□ 1.34
FDPS-212ENST00000487002 PLA2R1Q13018 1463 aa23.4■■□□□ 1.34
FDPS-212ENST00000487002 WDR7Q9Y4E6 1490 aa23.4■■□□□ 1.34
FDPS-212ENST00000487002 ABCA9Q8IUA7 1624 aa23.4■■□□□ 1.34
FDPS-212ENST00000487002 ZFYVE16Q7Z3T8 1539 aa23.38■■□□□ 1.33
FDPS-212ENST00000487002 PRAG1Q86YV5 1406 aa23.37■■□□□ 1.33
FDPS-212ENST00000487002 EIF2AK4Q9P2K8 1649 aaKnown RBP23.37■■□□□ 1.33
FDPS-212ENST00000487002 DHX29Q7Z478 1369 aaKnown RBP23.37■■□□□ 1.33
FDPS-212ENST00000487002 TRAPPC8Q9Y2L5 1435 aa23.36■■□□□ 1.33
FDPS-212ENST00000487002 CARD11Q9BXL7 1154 aa23.36■■□□□ 1.33
FDPS-212ENST00000487002 DEPDC5O75140 1603 aa23.35■■□□□ 1.33
FDPS-212ENST00000487002 HNRNPUQ00839 825 aaKnown RBP eCLIP23.35■■□□□ 1.336e-6■□□□□ 8.3
FDPS-212ENST00000487002 NEFLP07196 543 aa23.34■■□□□ 1.33
FDPS-212ENST00000487002 DCAF11Q8TEB1 546 aa23.34■■□□□ 1.33
FDPS-212ENST00000487002 E9PCH4 1651 aa23.34■■□□□ 1.33
FDPS-212ENST00000487002 INO80Q9ULG1 1556 aaPredicted RBP23.33■■□□□ 1.33
FDPS-212ENST00000487002 A2MP01023 1474 aa23.33■■□□□ 1.32
FDPS-212ENST00000487002 GPRASP1Q5JY77 1395 aa23.31■■□□□ 1.32
FDPS-212ENST00000487002 FKBP8Q14318 412 aa23.29■■□□□ 1.32
FDPS-212ENST00000487002 MRS2Q9HD23 443 aa23.29■■□□□ 1.32
FDPS-212ENST00000487002 PRDM15P57071 1507 aaPredicted RBP23.28■■□□□ 1.32
FDPS-212ENST00000487002 SPAG9O60271 1321 aaKnown RBP23.28■■□□□ 1.32
FDPS-212ENST00000487002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.28■■□□□ 1.322e-9■□□□□ 9.3
FDPS-212ENST00000487002 KDM2AQ9Y2K7 1162 aa23.28■■□□□ 1.32
FDPS-212ENST00000487002 ATP7AQ04656 1500 aa23.27■■□□□ 1.32
FDPS-212ENST00000487002 FANCAO15360 1455 aa23.27■■□□□ 1.32
FDPS-212ENST00000487002 CCDC184Q52MB2 194 aa23.27■■□□□ 1.32
FDPS-212ENST00000487002 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
FDPS-212ENST00000487002 TRPM2O94759 1503 aa23.25■■□□□ 1.31
FDPS-212ENST00000487002 TET3O43151 1660 aa23.25■■□□□ 1.31
FDPS-212ENST00000487002 SPHKAPQ2M3C7 1700 aa23.24■■□□□ 1.31
FDPS-212ENST00000487002 CEP152O94986 1710 aa23.24■■□□□ 1.31
FDPS-212ENST00000487002 KTN1Q86UP2 1357 aaKnown RBP23.23■■□□□ 1.31
FDPS-212ENST00000487002 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
FDPS-212ENST00000487002 ZBED9Q6R2W3 1325 aa23.22■■□□□ 1.31
FDPS-212ENST00000487002 ST20-MTHFSA0A0A6YYL1 179 aa23.22■■□□□ 1.31
FDPS-212ENST00000487002 ADGRL1O94910 1474 aa23.2■■□□□ 1.3
FDPS-212ENST00000487002 ASXL2Q76L83 1435 aa23.19■■□□□ 1.3
FDPS-212ENST00000487002 PTPRTO14522 1441 aa23.18■■□□□ 1.3
FDPS-212ENST00000487002 NEURL4Q96JN8 1562 aa23.18■■□□□ 1.3
FDPS-212ENST00000487002 FAM9BQ8IZU0 186 aa23.17■■□□□ 1.3
FDPS-212ENST00000487002 COL17A1Q9UMD9 1497 aaPredicted RBP23.17■■□□□ 1.3
FDPS-212ENST00000487002 MADDQ8WXG6 1647 aa23.16■■□□□ 1.3
FDPS-212ENST00000487002 POLR3GLQ9BT43 218 aa23.16■■□□□ 1.3
FDPS-212ENST00000487002 AFAP1Q8N556 730 aa23.16■■□□□ 1.3
FDPS-212ENST00000487002 CFAP74Q9C0B2 1584 aa23.16■■□□□ 1.3
FDPS-212ENST00000487002 RGL3Q3MIN7 710 aa23.15■■□□□ 1.3
FDPS-212ENST00000487002 KANK1Q14678 1352 aa23.13■■□□□ 1.29
FDPS-212ENST00000487002 CLTCL1P53675 1640 aa23.13■■□□□ 1.29
FDPS-212ENST00000487002 SCAPERQ9BY12 1400 aa23.13■■□□□ 1.29
FDPS-212ENST00000487002 MROH1Q8NDA8 1641 aa23.12■■□□□ 1.29
FDPS-212ENST00000487002 STAC3Q96MF2 364 aa23.12■■□□□ 1.29
FDPS-212ENST00000487002 BCANQ96GW7 911 aa23.11■■□□□ 1.29
FDPS-212ENST00000487002 IQGAP1P46940 1657 aa23.11■■□□□ 1.29
FDPS-212ENST00000487002 KIDINS220Q9ULH0 1771 aa23.1■■□□□ 1.29
FDPS-212ENST00000487002 RALBP1Q15311 655 aa23.09■■□□□ 1.29
FDPS-212ENST00000487002 NBPF1Q3BBV0 1214 aa23.09■■□□□ 1.29
FDPS-212ENST00000487002 ERICH6BQ5W0A0 696 aa23.09■■□□□ 1.29
FDPS-212ENST00000487002 ZNF518AQ6AHZ1 1483 aa23.08■■□□□ 1.29
FDPS-212ENST00000487002 BRD4O60885 1362 aaPredicted RBP23.08■■□□□ 1.29
FDPS-212ENST00000487002 KIAA1210Q9ULL0 1709 aa23.08■■□□□ 1.28
FDPS-212ENST00000487002 MYBBP1AQ9BQG0 1328 aaKnown RBP23.06■■□□□ 1.28
FDPS-212ENST00000487002 EFCAB6Q5THR3 1501 aa23.05■■□□□ 1.28
FDPS-212ENST00000487002 TESK2Q96S53 571 aa23.04■■□□□ 1.28
FDPS-212ENST00000487002 LMTK2Q8IWU2 1503 aa23.04■■□□□ 1.28
FDPS-212ENST00000487002 OSCARQ8IYS5 282 aa23.04■■□□□ 1.28
FDPS-212ENST00000487002 TSHZ2Q9NRE2 1034 aa23.04■■□□□ 1.28
FDPS-212ENST00000487002 WASHC2CQ9Y4E1 1318 aa23.03■■□□□ 1.28
FDPS-212ENST00000487002 PARD3Q8TEW0 1356 aa23.02■■□□□ 1.28
FDPS-212ENST00000487002 LRPPRCP42704 1394 aaKnown RBP23.01■■□□□ 1.27
FDPS-212ENST00000487002 PNISRQ8TF01 805 aaKnown RBP23.01■■□□□ 1.27
FDPS-212ENST00000487002 DISP3Q9P2K9 1392 aa23.01■■□□□ 1.27
FDPS-212ENST00000487002 SMG6Q86US8 1419 aaKnown RBP23.01■■□□□ 1.27
FDPS-212ENST00000487002 KIF1BO60333 1816 aa23■■□□□ 1.27
FDPS-212ENST00000487002 NPM1P06748 294 aaKnown RBP eCLIP23■■□□□ 1.273e-6■□□□□ 8.1
FDPS-212ENST00000487002 TMC1Q8TDI8 760 aa22.99■■□□□ 1.27
FDPS-212ENST00000487002 TMF1P82094 1093 aa22.98■■□□□ 1.27
FDPS-212ENST00000487002 PPRC1Q5VV67 1664 aaKnown RBP22.98■■□□□ 1.27
FDPS-212ENST00000487002 IFT172Q9UG01 1749 aa22.98■■□□□ 1.27
FDPS-212ENST00000487002 POGZQ7Z3K3 1410 aa22.98■■□□□ 1.27
FDPS-212ENST00000487002 MYOM2P54296 1465 aa22.98■■□□□ 1.27
FDPS-212ENST00000487002 KIF3BO15066 747 aa22.98■■□□□ 1.27
FDPS-212ENST00000487002 SCAF11Q99590 1463 aaKnown RBP22.97■■□□□ 1.27
FDPS-212ENST00000487002 HECW2Q9P2P5 1572 aa22.97■■□□□ 1.27
FDPS-212ENST00000487002 MLH3Q9UHC1 1453 aa22.97■■□□□ 1.27
FDPS-212ENST00000487002 MAP3K4Q9Y6R4 1608 aa22.95■■□□□ 1.26
FDPS-212ENST00000487002 CD109Q6YHK3 1445 aa22.95■■□□□ 1.26
FDPS-212ENST00000487002 PER1O15534 1290 aaPredicted RBP22.95■■□□□ 1.26
FDPS-212ENST00000487002 ZMYM4Q5VZL5 1548 aa22.94■■□□□ 1.26
FDPS-212ENST00000487002 NLRP13Q86W25 1043 aa22.94■■□□□ 1.26
FDPS-212ENST00000487002 SYNMO15061 1565 aa22.93■■□□□ 1.26
FDPS-212ENST00000487002 MYT1LQ9UL68 1186 aa22.92■■□□□ 1.26
FDPS-212ENST00000487002 FRMPD1Q5SYB0 1578 aa22.92■■□□□ 1.26
FDPS-212ENST00000487002 INSRP06213 1382 aa22.91■■□□□ 1.26
FDPS-212ENST00000487002 CNGB1Q14028 1251 aaPredicted RBP22.91■■□□□ 1.26
FDPS-212ENST00000487002 EIF3AQ14152 1382 aaKnown RBP22.9■■□□□ 1.26
FDPS-212ENST00000487002 NEO1Q92859 1461 aa22.9■■□□□ 1.26
FDPS-212ENST00000487002 NUDCQ9Y266 331 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms