RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 DISP3Q9P2K9 1392 aa29.8■■■□□ 2.36
GMDS-205ENST00000486793 MYO3AQ8NEV4 1616 aa29.8■■■□□ 2.36
GMDS-205ENST00000486793 A2ML1A8K2U0 1454 aa29.78■■■□□ 2.36
GMDS-205ENST00000486793 TNRQ92752 1358 aa29.77■■■□□ 2.36
GMDS-205ENST00000486793 KANK4Q5T7N3 995 aaPredicted RBP29.76■■■□□ 2.35
GMDS-205ENST00000486793 VPS8Q8N3P4 1428 aa29.75■■■□□ 2.35
GMDS-205ENST00000486793 UBAP1LF5GYI3 381 aa29.74■■■□□ 2.35
GMDS-205ENST00000486793 ZNF142P52746 1687 aaPredicted RBP29.74■■■□□ 2.35
GMDS-205ENST00000486793 LRRC9Q6ZRR7 1453 aa29.74■■■□□ 2.35
GMDS-205ENST00000486793 ILDR2Q71H61 639 aa29.72■■■□□ 2.35
GMDS-205ENST00000486793 PZPP20742 1482 aa29.7■■■□□ 2.35
GMDS-205ENST00000486793 KDM5DQ9BY66 1539 aa29.69■■■□□ 2.34
GMDS-205ENST00000486793 DNMT1P26358 1616 aaKnown RBP29.68■■■□□ 2.34
GMDS-205ENST00000486793 THEMISQ8N1K5 641 aaPredicted RBP29.68■■■□□ 2.34
GMDS-205ENST00000486793 MIA2Q96PC5 1412 aa29.68■■■□□ 2.34
GMDS-205ENST00000486793 ARHGEF5Q12774 1597 aa29.68■■■□□ 2.34
GMDS-205ENST00000486793 ANKLE2Q86XL3 938 aa29.66■■■□□ 2.34
GMDS-205ENST00000486793 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.64■■■□□ 2.34
GMDS-205ENST00000486793 FAM135AQ9P2D6 1515 aa29.64■■■□□ 2.34
GMDS-205ENST00000486793 MAP3K1Q13233 1512 aa29.57■■■□□ 2.32
GMDS-205ENST00000486793 NLRP1Q9C000 1473 aa29.57■■■□□ 2.32
GMDS-205ENST00000486793 MYOM3Q5VTT5 1437 aa29.57■■■□□ 2.32
GMDS-205ENST00000486793 SOCS7O14512 581 aa29.54■■■□□ 2.32
GMDS-205ENST00000486793 SHANK2Q9UPX8 1470 aa29.53■■■□□ 2.32
GMDS-205ENST00000486793 NEURL4Q96JN8 1562 aa29.52■■■□□ 2.32
GMDS-205ENST00000486793 UGGT1Q9NYU2 1555 aa29.52■■■□□ 2.32
GMDS-205ENST00000486793 MAST1Q9Y2H9 1570 aa29.52■■■□□ 2.32
GMDS-205ENST00000486793 ABCC3O15438 1527 aa29.51■■■□□ 2.32
GMDS-205ENST00000486793 PIP4K2BP78356 416 aa29.5■■■□□ 2.31
GMDS-205ENST00000486793 SCAF1Q9H7N4 1312 aaKnown RBP29.49■■■□□ 2.31
GMDS-205ENST00000486793 NPHP4O75161 1426 aaPredicted RBP29.49■■■□□ 2.31
GMDS-205ENST00000486793 TOM1O60784 492 aa29.49■■■□□ 2.31
GMDS-205ENST00000486793 APLP2Q06481 763 aa29.49■■■□□ 2.31
GMDS-205ENST00000486793 RRP7BPQ9NSQ0 103 aa29.48■■■□□ 2.31
GMDS-205ENST00000486793 SPATA31D1Q6ZQQ2 1576 aa29.47■■■□□ 2.31
GMDS-205ENST00000486793 RNF17Q9BXT8 1623 aaKnown RBP29.46■■■□□ 2.31
GMDS-205ENST00000486793 MED14O60244 1454 aa29.46■■■□□ 2.31
GMDS-205ENST00000486793 CPS1P31327 1500 aa29.45■■■□□ 2.31
GMDS-205ENST00000486793 HSPA1LP34931 641 aa29.44■■■□□ 2.3
GMDS-205ENST00000486793 ERVK-7P63135 1459 aa29.43■■■□□ 2.3
GMDS-205ENST00000486793 KIF15Q9NS87 1388 aa29.43■■■□□ 2.3
GMDS-205ENST00000486793 ABCC5O15440 1437 aa29.43■■■□□ 2.3
GMDS-205ENST00000486793 DUOX2Q9NRD8 1548 aa29.42■■■□□ 2.3
GMDS-205ENST00000486793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.41■■■□□ 2.3
GMDS-205ENST00000486793 POLR1AO95602 1720 aaPredicted RBP29.4■■■□□ 2.3
GMDS-205ENST00000486793 VWDEQ8N2E2 1590 aa29.39■■■□□ 2.3
GMDS-205ENST00000486793 MROH1Q8NDA8 1641 aa29.39■■■□□ 2.3
GMDS-205ENST00000486793 EIF2AK4Q9P2K8 1649 aaKnown RBP29.39■■■□□ 2.3
GMDS-205ENST00000486793 DEPDC5O75140 1603 aa29.36■■■□□ 2.29
GMDS-205ENST00000486793 ZC3H13Q5T200 1668 aaKnown RBP29.35■■■□□ 2.29
GMDS-205ENST00000486793 CHIC2Q9UKJ5 165 aa29.35■■■□□ 2.29
GMDS-205ENST00000486793 LTKP29376 864 aa29.34■■■□□ 2.29
GMDS-205ENST00000486793 TXNDC2Q86VQ3 553 aa29.34■■■□□ 2.29
GMDS-205ENST00000486793 ARHGAP31Q2M1Z3 1444 aa29.33■■■□□ 2.29
GMDS-205ENST00000486793 ERBINQ96RT1 1412 aa29.33■■■□□ 2.29
GMDS-205ENST00000486793 DAPK1P53355 1430 aa29.32■■■□□ 2.28
GMDS-205ENST00000486793 FGD6Q6ZV73 1430 aa29.29■■■□□ 2.28
GMDS-205ENST00000486793 PTPN23Q9H3S7 1636 aa29.27■■■□□ 2.28
GMDS-205ENST00000486793 EID1Q9Y6B2 187 aa29.27■■■□□ 2.28
GMDS-205ENST00000486793 KANK1Q14678 1352 aa29.26■■■□□ 2.28
GMDS-205ENST00000486793 IQGAP1P46940 1657 aa29.26■■■□□ 2.27
GMDS-205ENST00000486793 ANKRD30AQ9BXX3 1397 aa29.26■■■□□ 2.27
GMDS-205ENST00000486793 PRDM15P57071 1507 aaPredicted RBP29.25■■■□□ 2.27
GMDS-205ENST00000486793 LRRC7Q96NW7 1537 aa29.25■■■□□ 2.27
GMDS-205ENST00000486793 SCAF11Q99590 1463 aaKnown RBP29.25■■■□□ 2.27
GMDS-205ENST00000486793 CEP152O94986 1710 aa29.24■■■□□ 2.27
GMDS-205ENST00000486793 STAG3Q9UJ98 1225 aa29.24■■■□□ 2.27
GMDS-205ENST00000486793 ARHGAP23Q9P227 1491 aa29.23■■■□□ 2.27
GMDS-205ENST00000486793 IDI1Q13907 227 aa29.22■■■□□ 2.27
GMDS-205ENST00000486793 SENP3Q9H4L4 574 aaPredicted RBP29.21■■■□□ 2.27
GMDS-205ENST00000486793 ALKQ9UM73 1620 aa29.2■■■□□ 2.27
GMDS-205ENST00000486793 UBR1Q8IWV7 1749 aa29.2■■■□□ 2.26
GMDS-205ENST00000486793 SLIT1O75093 1534 aa29.2■■■□□ 2.26
GMDS-205ENST00000486793 TMEM2Q9UHN6 1383 aa29.19■■■□□ 2.26
GMDS-205ENST00000486793 CFAP65Q6ZU64 1925 aaKnown RBP29.17■■■□□ 2.26
GMDS-205ENST00000486793 FAM50AQ14320 339 aaKnown RBP29.16■■■□□ 2.26
GMDS-205ENST00000486793 CROCC2H7BZ55 1655 aa29.15■■■□□ 2.26
GMDS-205ENST00000486793 STRCP1A6NGW2 1772 aa29.14■■■□□ 2.26
GMDS-205ENST00000486793 LMTK2Q8IWU2 1503 aa29.12■■■□□ 2.25
GMDS-205ENST00000486793 MED1Q15648 1581 aaPredicted RBP29.1■■■□□ 2.25
GMDS-205ENST00000486793 SLC26A8Q96RN1 970 aa29.09■■■□□ 2.25
GMDS-205ENST00000486793 PIK3C2BO00750 1634 aa29.09■■■□□ 2.25
GMDS-205ENST00000486793 SLC52A1Q9NWF4 448 aa29.08■■■□□ 2.25
GMDS-205ENST00000486793 NOS1P29475 1434 aa29.07■■■□□ 2.24
GMDS-205ENST00000486793 SYNMO15061 1565 aa29.06■■■□□ 2.24
GMDS-205ENST00000486793 KCNA6P17658 529 aa29.06■■■□□ 2.24
GMDS-205ENST00000486793 PHF23Q9BUL5 403 aaPredicted RBP29.06■■■□□ 2.24
GMDS-205ENST00000486793 EFCAB6Q5THR3 1501 aa29.05■■■□□ 2.24
GMDS-205ENST00000486793 ADGRL2O95490 1459 aa29.05■■■□□ 2.24
GMDS-205ENST00000486793 ANKRD50Q9ULJ7 1429 aa29.03■■■□□ 2.24
GMDS-205ENST00000486793 TMEM94Q12767 1356 aa29.01■■■□□ 2.24
GMDS-205ENST00000486793 PROSER2Q86WR7 435 aaPredicted RBP29.01■■■□□ 2.23
GMDS-205ENST00000486793 RBM33Q96EV2 1170 aaKnown RBP29.01■■■□□ 2.23
GMDS-205ENST00000486793 BCANQ96GW7 911 aa29.01■■■□□ 2.23
GMDS-205ENST00000486793 TET3O43151 1660 aa28.96■■■□□ 2.23
GMDS-205ENST00000486793 FAM135BQ49AJ0 1406 aa28.94■■■□□ 2.22
GMDS-205ENST00000486793 RPRD2Q5VT52 1461 aaKnown RBP28.92■■■□□ 2.22
GMDS-205ENST00000486793 ADGRB3O60242 1522 aa28.92■■■□□ 2.22
GMDS-205ENST00000486793 KDM5AP29375 1690 aaKnown RBP28.92■■■□□ 2.22
GMDS-205ENST00000486793 HDGFP51858 240 aaKnown RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms