RNA–Protein interactions for RNA: ENST00000485532.1

PRAME-212, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 3

Gene PRAME, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-212ENST00000485532 TSPY4P0CV99 314 aa19.98■□□□□ 0.79
PRAME-212ENST00000485532 TSPY10P0CW01 314 aa19.98■□□□□ 0.79
PRAME-212ENST00000485532 DNMT1P26358 1616 aaKnown RBP19.97■□□□□ 0.79
PRAME-212ENST00000485532 A2ML1A8K2U0 1454 aa19.96■□□□□ 0.79
PRAME-212ENST00000485532 PLA2R1Q13018 1463 aa19.96■□□□□ 0.79
PRAME-212ENST00000485532 TCOF1Q13428 1488 aaKnown RBP19.96■□□□□ 0.79
PRAME-212ENST00000485532 ZNF335Q9H4Z2 1342 aaPredicted RBP19.96■□□□□ 0.79
PRAME-212ENST00000485532 WASHC2CQ9Y4E1 1318 aa19.96■□□□□ 0.79
PRAME-212ENST00000485532 MYOM3Q5VTT5 1437 aa19.95■□□□□ 0.78
PRAME-212ENST00000485532 MAST1Q9Y2H9 1570 aa19.95■□□□□ 0.78
PRAME-212ENST00000485532 TNRQ92752 1358 aa19.95■□□□□ 0.78
PRAME-212ENST00000485532 PZPP20742 1482 aa19.94■□□□□ 0.78
PRAME-212ENST00000485532 PKD2Q13563 968 aa19.92■□□□□ 0.78
PRAME-212ENST00000485532 MIA2Q96PC5 1412 aa19.92■□□□□ 0.78
PRAME-212ENST00000485532 FAM135AQ9P2D6 1515 aa19.92■□□□□ 0.78
PRAME-212ENST00000485532 RNF17Q9BXT8 1623 aaKnown RBP19.91■□□□□ 0.78
PRAME-212ENST00000485532 POLR1AO95602 1720 aaPredicted RBP19.88■□□□□ 0.77
PRAME-212ENST00000485532 MROH1Q8NDA8 1641 aa19.88■□□□□ 0.77
PRAME-212ENST00000485532 ABCC3O15438 1527 aa19.87■□□□□ 0.77
PRAME-212ENST00000485532 EIF2AK4Q9P2K8 1649 aaKnown RBP19.87■□□□□ 0.77
PRAME-212ENST00000485532 NEURL4Q96JN8 1562 aa19.87■□□□□ 0.77
PRAME-212ENST00000485532 IQSEC2Q5JU85 1478 aa19.86■□□□□ 0.77
PRAME-212ENST00000485532 CEP152O94986 1710 aa19.86■□□□□ 0.77
PRAME-212ENST00000485532 PTPN23Q9H3S7 1636 aa19.86■□□□□ 0.77
PRAME-212ENST00000485532 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.85■□□□□ 0.77
PRAME-212ENST00000485532 CROCC2H7BZ55 1655 aa19.85■□□□□ 0.77
PRAME-212ENST00000485532 CFAP65Q6ZU64 1925 aaKnown RBP19.85■□□□□ 0.77
PRAME-212ENST00000485532 ZC3H13Q5T200 1668 aaKnown RBP19.84■□□□□ 0.77
PRAME-212ENST00000485532 ABCC5O15440 1437 aa19.84■□□□□ 0.77
PRAME-212ENST00000485532 APLP2Q06481 763 aa19.83■□□□□ 0.77
PRAME-212ENST00000485532 UGGT1Q9NYU2 1555 aa19.83■□□□□ 0.76
PRAME-212ENST00000485532 DUOX2Q9NRD8 1548 aa19.82■□□□□ 0.76
PRAME-212ENST00000485532 NLRP1Q9C000 1473 aa19.82■□□□□ 0.76
PRAME-212ENST00000485532 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
PRAME-212ENST00000485532 SPATA31D1Q6ZQQ2 1576 aa19.8■□□□□ 0.76
PRAME-212ENST00000485532 KIF15Q9NS87 1388 aa19.8■□□□□ 0.76
PRAME-212ENST00000485532 ERVK-7P63135 1459 aa19.79■□□□□ 0.76
PRAME-212ENST00000485532 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
PRAME-212ENST00000485532 UBAP1LF5GYI3 381 aa19.79■□□□□ 0.76
PRAME-212ENST00000485532 THEMISQ8N1K5 641 aaPredicted RBP19.79■□□□□ 0.76
PRAME-212ENST00000485532 SHANK2Q9UPX8 1470 aa19.79■□□□□ 0.76
PRAME-212ENST00000485532 DAPK1P53355 1430 aa19.78■□□□□ 0.76
PRAME-212ENST00000485532 ANKLE2Q86XL3 938 aa19.78■□□□□ 0.76
PRAME-212ENST00000485532 DISP3Q9P2K9 1392 aa19.76■□□□□ 0.75
PRAME-212ENST00000485532 CHIC2Q9UKJ5 165 aa19.76■□□□□ 0.75
PRAME-212ENST00000485532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.75
PRAME-212ENST00000485532 DEPDC5O75140 1603 aa19.75■□□□□ 0.75
PRAME-212ENST00000485532 PRDM15P57071 1507 aaPredicted RBP19.75■□□□□ 0.75
PRAME-212ENST00000485532 NPHP4O75161 1426 aaPredicted RBP19.74■□□□□ 0.75
PRAME-212ENST00000485532 ERBINQ96RT1 1412 aa19.74■□□□□ 0.75
PRAME-212ENST00000485532 VWDEQ8N2E2 1590 aa19.74■□□□□ 0.75
PRAME-212ENST00000485532 UBR1Q8IWV7 1749 aa19.73■□□□□ 0.75
PRAME-212ENST00000485532 MED14O60244 1454 aa19.73■□□□□ 0.75
PRAME-212ENST00000485532 IQGAP1P46940 1657 aa19.72■□□□□ 0.75
PRAME-212ENST00000485532 ILDR2Q71H61 639 aa19.72■□□□□ 0.75
PRAME-212ENST00000485532 CPS1P31327 1500 aa19.7■□□□□ 0.74
PRAME-212ENST00000485532 STRCP1A6NGW2 1772 aa19.69■□□□□ 0.74
PRAME-212ENST00000485532 ARHGAP31Q2M1Z3 1444 aa19.68■□□□□ 0.74
PRAME-212ENST00000485532 ANKRD30AQ9BXX3 1397 aa19.67■□□□□ 0.74
PRAME-212ENST00000485532 PIP4K2BP78356 416 aa19.66■□□□□ 0.74
PRAME-212ENST00000485532 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
PRAME-212ENST00000485532 PIK3C2BO00750 1634 aa19.65■□□□□ 0.74
PRAME-212ENST00000485532 FAM50AQ14320 339 aaKnown RBP19.65■□□□□ 0.74
PRAME-212ENST00000485532 LTKP29376 864 aa19.64■□□□□ 0.73
PRAME-212ENST00000485532 KANK1Q14678 1352 aa19.63■□□□□ 0.73
PRAME-212ENST00000485532 ALKQ9UM73 1620 aa19.62■□□□□ 0.73
PRAME-212ENST00000485532 SCAF11Q99590 1463 aaKnown RBP19.62■□□□□ 0.73
PRAME-212ENST00000485532 ARHGAP23Q9P227 1491 aa19.62■□□□□ 0.73
PRAME-212ENST00000485532 SLIT1O75093 1534 aa19.61■□□□□ 0.73
PRAME-212ENST00000485532 ADGRL2O95490 1459 aa19.61■□□□□ 0.73
PRAME-212ENST00000485532 LMTK2Q8IWU2 1503 aa19.61■□□□□ 0.73
PRAME-212ENST00000485532 TOM1O60784 492 aa19.6■□□□□ 0.73
PRAME-212ENST00000485532 HSPA1LP34931 641 aa19.6■□□□□ 0.73
PRAME-212ENST00000485532 TXNDC2Q86VQ3 553 aa19.6■□□□□ 0.73
PRAME-212ENST00000485532 SYNMO15061 1565 aa19.6■□□□□ 0.73
PRAME-212ENST00000485532 LRRC7Q96NW7 1537 aa19.59■□□□□ 0.73
PRAME-212ENST00000485532 EFCAB6Q5THR3 1501 aa19.57■□□□□ 0.72
PRAME-212ENST00000485532 IDI1Q13907 227 aa19.57■□□□□ 0.72
PRAME-212ENST00000485532 STAG3Q9UJ98 1225 aa19.56■□□□□ 0.72
PRAME-212ENST00000485532 TMEM2Q9UHN6 1383 aa19.56■□□□□ 0.72
PRAME-212ENST00000485532 ANKRD50Q9ULJ7 1429 aa19.55■□□□□ 0.72
PRAME-212ENST00000485532 NOS1P29475 1434 aa19.54■□□□□ 0.72
PRAME-212ENST00000485532 EID1Q9Y6B2 187 aa19.54■□□□□ 0.72
PRAME-212ENST00000485532 SENP3Q9H4L4 574 aaPredicted RBP19.53■□□□□ 0.72
PRAME-212ENST00000485532 XIRP1Q702N8 1843 aaKnown RBP19.53■□□□□ 0.72
PRAME-212ENST00000485532 KDM5AP29375 1690 aaKnown RBP19.52■□□□□ 0.72
PRAME-212ENST00000485532 PPARGC1BQ86YN6 1023 aaKnown RBP19.52■□□□□ 0.72
PRAME-212ENST00000485532 SOCS7O14512 581 aa19.5■□□□□ 0.71
PRAME-212ENST00000485532 ADGRB3O60242 1522 aa19.5■□□□□ 0.71
PRAME-212ENST00000485532 MYO5BQ9ULV0 1848 aa19.49■□□□□ 0.71
PRAME-212ENST00000485532 MED1Q15648 1581 aaPredicted RBP19.49■□□□□ 0.71
PRAME-212ENST00000485532 TET3O43151 1660 aa19.48■□□□□ 0.71
PRAME-212ENST00000485532 SLC26A8Q96RN1 970 aa19.47■□□□□ 0.71
PRAME-212ENST00000485532 UNC13BO14795 1591 aa19.46■□□□□ 0.71
PRAME-212ENST00000485532 ITGAEP38570 1179 aa19.45■□□□□ 0.7
PRAME-212ENST00000485532 RPRD2Q5VT52 1461 aaKnown RBP19.45■□□□□ 0.7
PRAME-212ENST00000485532 GCC2Q8IWJ2 1684 aa19.45■□□□□ 0.7
PRAME-212ENST00000485532 SLC52A1Q9NWF4 448 aa19.44■□□□□ 0.7
PRAME-212ENST00000485532 E9PCH4 1651 aa19.43■□□□□ 0.7
PRAME-212ENST00000485532 RBM33Q96EV2 1170 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms