RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 TCOF1Q13428 1488 aaKnown RBP21.17■□□□□ 0.98
UBA3-210ENST00000485424 KDM5DQ9BY66 1539 aa21.16■□□□□ 0.98
UBA3-210ENST00000485424 SPATA31D1Q6ZQQ2 1576 aa21.15■□□□□ 0.98
UBA3-210ENST00000485424 GGT6Q6P531 493 aa21.15■□□□□ 0.98
UBA3-210ENST00000485424 CFAP65Q6ZU64 1925 aaKnown RBP21.15■□□□□ 0.98
UBA3-210ENST00000485424 ZC3H13Q5T200 1668 aaKnown RBP21.13■□□□□ 0.97
UBA3-210ENST00000485424 RNF17Q9BXT8 1623 aaKnown RBP21.13■□□□□ 0.97
UBA3-210ENST00000485424 A2ML1A8K2U0 1454 aa21.13■□□□□ 0.97
UBA3-210ENST00000485424 NEURL4Q96JN8 1562 aa21.12■□□□□ 0.97
UBA3-210ENST00000485424 DHX29Q7Z478 1369 aaKnown RBP21.11■□□□□ 0.97
UBA3-210ENST00000485424 CEP152O94986 1710 aa21.11■□□□□ 0.97
UBA3-210ENST00000485424 NCKAP5LQ9HCH0 1330 aa21.1■□□□□ 0.97
UBA3-210ENST00000485424 EIF2AK4Q9P2K8 1649 aaKnown RBP21.1■□□□□ 0.97
UBA3-210ENST00000485424 MAST1Q9Y2H9 1570 aa21.1■□□□□ 0.97
UBA3-210ENST00000485424 PZPP20742 1482 aa21.09■□□□□ 0.97
UBA3-210ENST00000485424 CROCC2H7BZ55 1655 aa21.09■□□□□ 0.97
UBA3-210ENST00000485424 LRRC9Q6ZRR7 1453 aa21.06■□□□□ 0.96
UBA3-210ENST00000485424 ZNF335Q9H4Z2 1342 aaPredicted RBP21.05■□□□□ 0.96
UBA3-210ENST00000485424 PKD2Q13563 968 aa21.05■□□□□ 0.96
UBA3-210ENST00000485424 VPS8Q8N3P4 1428 aa21.04■□□□□ 0.96
UBA3-210ENST00000485424 MROH1Q8NDA8 1641 aa21.04■□□□□ 0.96
UBA3-210ENST00000485424 DISP3Q9P2K9 1392 aa21.03■□□□□ 0.96
UBA3-210ENST00000485424 DEPDC5O75140 1603 aa21.03■□□□□ 0.96
UBA3-210ENST00000485424 KIF3BO15066 747 aa21.02■□□□□ 0.96
UBA3-210ENST00000485424 IQGAP1P46940 1657 aa21.02■□□□□ 0.95
UBA3-210ENST00000485424 TNRQ92752 1358 aa21.01■□□□□ 0.95
UBA3-210ENST00000485424 ABCC3O15438 1527 aa20.99■□□□□ 0.95
UBA3-210ENST00000485424 MAP3K1Q13233 1512 aa20.99■□□□□ 0.95
UBA3-210ENST00000485424 LOC105371045A0A1W2PR82 267 aa20.99■□□□□ 0.95
UBA3-210ENST00000485424 RSPH4AQ5TD94 716 aa20.99■□□□□ 0.95
UBA3-210ENST00000485424 STRCP1A6NGW2 1772 aa20.99■□□□□ 0.95
UBA3-210ENST00000485424 UBR1Q8IWV7 1749 aa20.98■□□□□ 0.95
UBA3-210ENST00000485424 UGGT1Q9NYU2 1555 aa20.98■□□□□ 0.95
UBA3-210ENST00000485424 NLRP1Q9C000 1473 aa20.97■□□□□ 0.95
UBA3-210ENST00000485424 VWDEQ8N2E2 1590 aa20.97■□□□□ 0.95
UBA3-210ENST00000485424 FBXO31Q5XUX0 539 aaPredicted RBP20.96■□□□□ 0.95
UBA3-210ENST00000485424 CPS1P31327 1500 aa20.95■□□□□ 0.94
UBA3-210ENST00000485424 ILDR2Q71H61 639 aa20.94■□□□□ 0.94
UBA3-210ENST00000485424 WASHC2CQ9Y4E1 1318 aa20.94■□□□□ 0.94
UBA3-210ENST00000485424 MYOM3Q5VTT5 1437 aa20.93■□□□□ 0.94
UBA3-210ENST00000485424 MIA2Q96PC5 1412 aa20.92■□□□□ 0.94
UBA3-210ENST00000485424 PTPN23Q9H3S7 1636 aa20.92■□□□□ 0.94
UBA3-210ENST00000485424 UBAP1LF5GYI3 381 aa20.91■□□□□ 0.94
UBA3-210ENST00000485424 TSPY4P0CV99 314 aa20.91■□□□□ 0.94
UBA3-210ENST00000485424 TSPY10P0CW01 314 aa20.91■□□□□ 0.94
UBA3-210ENST00000485424 SHANK2Q9UPX8 1470 aa20.91■□□□□ 0.94
UBA3-210ENST00000485424 PRDM15P57071 1507 aaPredicted RBP20.9■□□□□ 0.94
UBA3-210ENST00000485424 DUOX2Q9NRD8 1548 aa20.9■□□□□ 0.94
UBA3-210ENST00000485424 MED14O60244 1454 aa20.9■□□□□ 0.94
UBA3-210ENST00000485424 SYNMO15061 1565 aa20.89■□□□□ 0.94
UBA3-210ENST00000485424 ERVK-7P63135 1459 aa20.89■□□□□ 0.94
UBA3-210ENST00000485424 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.89■□□□□ 0.93
UBA3-210ENST00000485424 XIRP1Q702N8 1843 aaKnown RBP20.88■□□□□ 0.93
UBA3-210ENST00000485424 APLP2Q06481 763 aa20.87■□□□□ 0.93
UBA3-210ENST00000485424 ALKQ9UM73 1620 aa20.86■□□□□ 0.93
UBA3-210ENST00000485424 KANK4Q5T7N3 995 aaPredicted RBP20.86■□□□□ 0.93
UBA3-210ENST00000485424 NPHP4O75161 1426 aaPredicted RBP20.86■□□□□ 0.93
UBA3-210ENST00000485424 PIK3C2BO00750 1634 aa20.83■□□□□ 0.93
UBA3-210ENST00000485424 KDM5AP29375 1690 aaKnown RBP20.83■□□□□ 0.92
UBA3-210ENST00000485424 SOCS7O14512 581 aa20.82■□□□□ 0.92
UBA3-210ENST00000485424 ANKLE2Q86XL3 938 aa20.82■□□□□ 0.92
UBA3-210ENST00000485424 THEMISQ8N1K5 641 aaPredicted RBP20.82■□□□□ 0.92
UBA3-210ENST00000485424 MED1Q15648 1581 aaPredicted RBP20.81■□□□□ 0.92
UBA3-210ENST00000485424 ERBINQ96RT1 1412 aa20.79■□□□□ 0.92
UBA3-210ENST00000485424 MYO5BQ9ULV0 1848 aa20.78■□□□□ 0.92
UBA3-210ENST00000485424 ABCC5O15440 1437 aa20.78■□□□□ 0.92
UBA3-210ENST00000485424 KIF15Q9NS87 1388 aa20.77■□□□□ 0.92
UBA3-210ENST00000485424 SLIT1O75093 1534 aa20.77■□□□□ 0.92
UBA3-210ENST00000485424 DAPK1P53355 1430 aa20.76■□□□□ 0.91
UBA3-210ENST00000485424 ARHGAP31Q2M1Z3 1444 aa20.75■□□□□ 0.91
UBA3-210ENST00000485424 SCAF11Q99590 1463 aaKnown RBP20.75■□□□□ 0.91
UBA3-210ENST00000485424 ARHGAP23Q9P227 1491 aa20.75■□□□□ 0.91
UBA3-210ENST00000485424 LRRC7Q96NW7 1537 aa20.74■□□□□ 0.91
UBA3-210ENST00000485424 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
UBA3-210ENST00000485424 FGD6Q6ZV73 1430 aa20.73■□□□□ 0.91
UBA3-210ENST00000485424 TOM1O60784 492 aa20.72■□□□□ 0.91
UBA3-210ENST00000485424 PIP4K2BP78356 416 aa20.72■□□□□ 0.91
UBA3-210ENST00000485424 HSPA1LP34931 641 aa20.71■□□□□ 0.91
UBA3-210ENST00000485424 LMTK2Q8IWU2 1503 aa20.7■□□□□ 0.9
UBA3-210ENST00000485424 EFCAB6Q5THR3 1501 aa20.69■□□□□ 0.9
UBA3-210ENST00000485424 GCC2Q8IWJ2 1684 aa20.67■□□□□ 0.9
UBA3-210ENST00000485424 RRP7BPQ9NSQ0 103 aa20.66■□□□□ 0.9
UBA3-210ENST00000485424 ADGRB3O60242 1522 aa20.64■□□□□ 0.9
UBA3-210ENST00000485424 TET3O43151 1660 aa20.64■□□□□ 0.89
UBA3-210ENST00000485424 ADGRL2O95490 1459 aa20.63■□□□□ 0.89
UBA3-210ENST00000485424 KANK1Q14678 1352 aa20.62■□□□□ 0.89
UBA3-210ENST00000485424 ANKRD30AQ9BXX3 1397 aa20.61■□□□□ 0.89
UBA3-210ENST00000485424 LTKP29376 864 aa20.61■□□□□ 0.89
UBA3-210ENST00000485424 CHD2O14647 1828 aaKnown RBP20.6■□□□□ 0.89
UBA3-210ENST00000485424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.6■□□□□ 0.89
UBA3-210ENST00000485424 UNC13BO14795 1591 aa20.59■□□□□ 0.89
UBA3-210ENST00000485424 NWD1Q149M9 1564 aa20.59■□□□□ 0.89
UBA3-210ENST00000485424 TMEM2Q9UHN6 1383 aa20.59■□□□□ 0.89
UBA3-210ENST00000485424 NOS1P29475 1434 aa20.57■□□□□ 0.88
UBA3-210ENST00000485424 TXNDC2Q86VQ3 553 aa20.57■□□□□ 0.88
UBA3-210ENST00000485424 ROBO1Q9Y6N7 1651 aa20.57■□□□□ 0.88
UBA3-210ENST00000485424 CHIC2Q9UKJ5 165 aa20.56■□□□□ 0.88
UBA3-210ENST00000485424 E9PCH4 1651 aa20.56■□□□□ 0.88
UBA3-210ENST00000485424 TMEM131LA2VDJ0 1609 aa20.54■□□□□ 0.88
UBA3-210ENST00000485424 EID1Q9Y6B2 187 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms