RNA–Protein interactions for RNA: ENST00000484485.5

PLXNB1-217, Transcript of plexin B1, humanhuman

TSL 4

Gene PLXNB1, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-217ENST00000484485 KIF15Q9NS87 1388 aa28.17■■■□□ 2.1
PLXNB1-217ENST00000484485 DUOX2Q9NRD8 1548 aa28.17■■■□□ 2.1
PLXNB1-217ENST00000484485 WASHC2CQ9Y4E1 1318 aa28.17■■■□□ 2.1
PLXNB1-217ENST00000484485 RRP7BPQ9NSQ0 103 aa28.16■■■□□ 2.1
PLXNB1-217ENST00000484485 CROCC2H7BZ55 1655 aa28.16■■■□□ 2.1
PLXNB1-217ENST00000484485 RNF17Q9BXT8 1623 aaKnown RBP28.15■■■□□ 2.1
PLXNB1-217ENST00000484485 FBXO31Q5XUX0 539 aaPredicted RBP28.15■■■□□ 2.1
PLXNB1-217ENST00000484485 MROH1Q8NDA8 1641 aa28.13■■■□□ 2.09
PLXNB1-217ENST00000484485 EIF2AK4Q9P2K8 1649 aaKnown RBP28.12■■■□□ 2.09
PLXNB1-217ENST00000484485 PZPP20742 1482 aa28.12■■■□□ 2.09
PLXNB1-217ENST00000484485 STRCQ7RTU9 1775 aa28.11■■■□□ 2.09
PLXNB1-217ENST00000484485 CHIC2Q9UKJ5 165 aa28.11■■■□□ 2.09
PLXNB1-217ENST00000484485 NCOA1Q15788 1441 aa28.1■■■□□ 2.09
PLXNB1-217ENST00000484485 ILDR1Q86SU0 546 aaPredicted RBP28.1■■■□□ 2.09
PLXNB1-217ENST00000484485 FAM50AQ14320 339 aaKnown RBP28.09■■■□□ 2.09
PLXNB1-217ENST00000484485 ERBINQ96RT1 1412 aa28.09■■■□□ 2.09
PLXNB1-217ENST00000484485 ABCC3O15438 1527 aa28.08■■■□□ 2.09
PLXNB1-217ENST00000484485 ANKRD30AQ9BXX3 1397 aa28.07■■■□□ 2.08
PLXNB1-217ENST00000484485 ADGRL2O95490 1459 aa28.07■■■□□ 2.08
PLXNB1-217ENST00000484485 PPARGC1BQ86YN6 1023 aaKnown RBP28.06■■■□□ 2.08
PLXNB1-217ENST00000484485 MYO3AQ8NEV4 1616 aa28.06■■■□□ 2.08
PLXNB1-217ENST00000484485 TNRQ92752 1358 aa28.04■■■□□ 2.08
PLXNB1-217ENST00000484485 DMRT2Q9Y5R5 561 aa28.03■■■□□ 2.08
PLXNB1-217ENST00000484485 CEP170BQ9Y4F5 1589 aaPredicted RBP28.03■■■□□ 2.08
PLXNB1-217ENST00000484485 ZNF142P52746 1687 aaPredicted RBP28.02■■■□□ 2.08
PLXNB1-217ENST00000484485 PTPRTO14522 1441 aa28.01■■■□□ 2.08
PLXNB1-217ENST00000484485 CAMSAP1Q5T5Y3 1602 aa28.01■■■□□ 2.07
PLXNB1-217ENST00000484485 A2ML1A8K2U0 1454 aa28.01■■■□□ 2.07
PLXNB1-217ENST00000484485 PRDM15P57071 1507 aaPredicted RBP28■■■□□ 2.07
PLXNB1-217ENST00000484485 ZC3H13Q5T200 1668 aaKnown RBP27.97■■■□□ 2.07
PLXNB1-217ENST00000484485 PLA2R1Q13018 1463 aa27.97■■■□□ 2.07
PLXNB1-217ENST00000484485 NCKAP5LQ9HCH0 1330 aa27.96■■■□□ 2.07
PLXNB1-217ENST00000484485 DEPDC5O75140 1603 aa27.96■■■□□ 2.07
PLXNB1-217ENST00000484485 SPATA31D1Q6ZQQ2 1576 aa27.94■■■□□ 2.06
PLXNB1-217ENST00000484485 ARHGAP31Q2M1Z3 1444 aa27.93■■■□□ 2.06
PLXNB1-217ENST00000484485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.93■■■□□ 2.066e-11■□□□□ 9.5
PLXNB1-217ENST00000484485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.93■■■□□ 2.06
PLXNB1-217ENST00000484485 ERVK-7P63135 1459 aa27.93■■■□□ 2.06
PLXNB1-217ENST00000484485 VWDEQ8N2E2 1590 aa27.92■■■□□ 2.06
PLXNB1-217ENST00000484485 NLRP1Q9C000 1473 aa27.91■■■□□ 2.06
PLXNB1-217ENST00000484485 CEP152O94986 1710 aa27.9■■■□□ 2.06
PLXNB1-217ENST00000484485 PKD2Q13563 968 aa27.9■■■□□ 2.06
PLXNB1-217ENST00000484485 FBXO41Q8TF61 875 aa27.9■■■□□ 2.06
PLXNB1-217ENST00000484485 ANKRD50Q9ULJ7 1429 aa27.9■■■□□ 2.06
PLXNB1-217ENST00000484485 CERKQ8TCT0 537 aa27.89■■■□□ 2.06
PLXNB1-217ENST00000484485 LMTK2Q8IWU2 1503 aa27.88■■■□□ 2.05
PLXNB1-217ENST00000484485 ROCK1Q13464 1354 aa27.87■■■□□ 2.05
PLXNB1-217ENST00000484485 KANK1Q14678 1352 aa27.85■■■□□ 2.05
PLXNB1-217ENST00000484485 RRBP1Q9P2E9 1410 aaKnown RBP27.83■■■□□ 2.05
PLXNB1-217ENST00000484485 THEMISQ8N1K5 641 aaPredicted RBP27.82■■■□□ 2.04
PLXNB1-217ENST00000484485 UGGT1Q9NYU2 1555 aa27.82■■■□□ 2.04
PLXNB1-217ENST00000484485 LTBP4Q8N2S1 1624 aa27.81■■■□□ 2.04
PLXNB1-217ENST00000484485 ITGAEP38570 1179 aa27.78■■■□□ 2.04
PLXNB1-217ENST00000484485 NEURL4Q96JN8 1562 aa27.77■■■□□ 2.04
PLXNB1-217ENST00000484485 ANKLE2Q86XL3 938 aa27.75■■■□□ 2.03
PLXNB1-217ENST00000484485 NOS1P29475 1434 aa27.75■■■□□ 2.03
PLXNB1-217ENST00000484485 ZNF335Q9H4Z2 1342 aaPredicted RBP27.74■■■□□ 2.03
PLXNB1-217ENST00000484485 EFCAB6Q5THR3 1501 aa27.74■■■□□ 2.03
PLXNB1-217ENST00000484485 MED14O60244 1454 aa27.71■■■□□ 2.03
PLXNB1-217ENST00000484485 UNC13BO14795 1591 aa27.7■■■□□ 2.03
PLXNB1-217ENST00000484485 IDI1Q13907 227 aa27.7■■■□□ 2.02
PLXNB1-217ENST00000484485 CFAP65Q6ZU64 1925 aaKnown RBP27.7■■■□□ 2.02
PLXNB1-217ENST00000484485 SYNMO15061 1565 aa27.68■■■□□ 2.02
PLXNB1-217ENST00000484485 UBR1Q8IWV7 1749 aa27.67■■■□□ 2.02
PLXNB1-217ENST00000484485 RPRD2Q5VT52 1461 aaKnown RBP27.66■■■□□ 2.02
PLXNB1-217ENST00000484485 ARHGAP23Q9P227 1491 aa27.66■■■□□ 2.02
PLXNB1-217ENST00000484485 NPHP4O75161 1426 aaPredicted RBP27.66■■■□□ 2.02
PLXNB1-217ENST00000484485 POLR1AO95602 1720 aaPredicted RBP27.65■■■□□ 2.02
PLXNB1-217ENST00000484485 LTKP29376 864 aa27.64■■■□□ 2.02
PLXNB1-217ENST00000484485 SLIT1O75093 1534 aa27.63■■■□□ 2.01
PLXNB1-217ENST00000484485 PIK3C2BO00750 1634 aa27.62■■■□□ 2.01
PLXNB1-217ENST00000484485 TET3O43151 1660 aa27.62■■■□□ 2.01
PLXNB1-217ENST00000484485 NUP155O75694 1391 aa27.6■■■□□ 2.01
PLXNB1-217ENST00000484485 SLC52A1Q9NWF4 448 aa27.6■■■□□ 2.01
PLXNB1-217ENST00000484485 TMEM2Q9UHN6 1383 aa27.6■■■□□ 2.01
PLXNB1-217ENST00000484485 IQSEC2Q5JU85 1478 aa27.59■■■□□ 2.01
PLXNB1-217ENST00000484485 NAIPQ13075 1403 aa27.58■■■□□ 2.01
PLXNB1-217ENST00000484485 SCAF11Q99590 1463 aaKnown RBP27.58■■■□□ 2.01
PLXNB1-217ENST00000484485 IQGAP3Q86VI3 1631 aa27.58■■■□□ 2.01
PLXNB1-217ENST00000484485 TXNDC2Q86VQ3 553 aa27.57■■■□□ 2
PLXNB1-217ENST00000484485 KDM5AP29375 1690 aaKnown RBP27.54■■■□□ 2
PLXNB1-217ENST00000484485 GCC2Q8IWJ2 1684 aa27.53■■■□□ 2
PLXNB1-217ENST00000484485 E9PCH4 1651 aa27.52■■■□□ 2
PLXNB1-217ENST00000484485 IQGAP1P46940 1657 aa27.52■■■□□ 2
PLXNB1-217ENST00000484485 STAG3Q9UJ98 1225 aa27.52■■■□□ 2
PLXNB1-217ENST00000484485 ADGRB3O60242 1522 aa27.51■■□□□ 1.99
PLXNB1-217ENST00000484485 HFM1A2PYH4 1435 aa27.5■■□□□ 1.99
PLXNB1-217ENST00000484485 EID1Q9Y6B2 187 aa27.49■■□□□ 1.99
PLXNB1-217ENST00000484485 CPS1P31327 1500 aa27.47■■□□□ 1.99
PLXNB1-217ENST00000484485 ZFYVE9O95405 1425 aa27.44■■□□□ 1.98
PLXNB1-217ENST00000484485 TMEM131LA2VDJ0 1609 aa27.42■■□□□ 1.98
PLXNB1-217ENST00000484485 STRCP1A6NGW2 1772 aa27.4■■□□□ 1.98
PLXNB1-217ENST00000484485 UBAP1LF5GYI3 381 aa27.37■■□□□ 1.97
PLXNB1-217ENST00000484485 RIMS2Q9UQ26 1411 aa27.37■■□□□ 1.97
PLXNB1-217ENST00000484485 LRRC7Q96NW7 1537 aa27.36■■□□□ 1.97
PLXNB1-217ENST00000484485 SLC26A8Q96RN1 970 aa27.34■■□□□ 1.97
PLXNB1-217ENST00000484485 CHGAP10645 457 aaKnown RBP27.33■■□□□ 1.97
PLXNB1-217ENST00000484485 PLEKHG1Q9ULL1 1385 aa27.33■■□□□ 1.97
PLXNB1-217ENST00000484485 MYO5BQ9ULV0 1848 aa27.32■■□□□ 1.96
PLXNB1-217ENST00000484485 TRIM52Q96A61 297 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms