RNA–Protein interactions for RNA: ENST00000484485.5

PLXNB1-217, Transcript of plexin B1, humanhuman

TSL 4

Gene PLXNB1, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-217ENST00000484485 NISCHQ9Y2I1 1504 aa44.82■■■■■ 4.77
PLXNB1-217ENST00000484485 CCDC180Q9P1Z9 1646 aa39.86■■■■□ 3.97
PLXNB1-217ENST00000484485 ABCC9O60706 1549 aa39.43■■■■□ 3.9
PLXNB1-217ENST00000484485 RB1CC1Q8TDY2 1594 aa37.71■■■■□ 3.63
PLXNB1-217ENST00000484485 NACADO15069 1562 aa37.62■■■■□ 3.61
PLXNB1-217ENST00000484485 DCAF8L2P0C7V8 631 aa37.52■■■■□ 3.6
PLXNB1-217ENST00000484485 MYO15BQ96JP2 1530 aa37.36■■■■□ 3.57
PLXNB1-217ENST00000484485 ZCCHC6Q5VYS8 1495 aaKnown RBP37.26■■■■□ 3.56
PLXNB1-217ENST00000484485 DCAF1Q9Y4B6 1507 aa37.06■■■■□ 3.52
PLXNB1-217ENST00000484485 PABPN1Q86U42 306 aaKnown RBP eCLIP36.85■■■■□ 3.491e-9■□□□□ 10.5
PLXNB1-217ENST00000484485 UNC13AQ9UPW8 1703 aa36.81■■■■□ 3.48
PLXNB1-217ENST00000484485 BICRAQ9NZM4 1560 aa36.7■■■■□ 3.47
PLXNB1-217ENST00000484485 DNAJC5BQ9UF47 199 aa36.68■■■■□ 3.46
PLXNB1-217ENST00000484485 SCRIBQ14160 1630 aa36.37■■■■□ 3.41
PLXNB1-217ENST00000484485 SHROOM4Q9ULL8 1493 aa36.2■■■■□ 3.39
PLXNB1-217ENST00000484485 EIF4G1Q04637 1599 aaKnown RBP35.7■■■■□ 3.31
PLXNB1-217ENST00000484485 CC2D2AQ9P2K1 1620 aa35.62■■■■□ 3.29
PLXNB1-217ENST00000484485 CECR2Q9BXF3 1484 aa35.46■■■■□ 3.27
PLXNB1-217ENST00000484485 NCAPD3P42695 1498 aa34.81■■■■□ 3.16
PLXNB1-217ENST00000484485 SMARCA4P51532 1647 aa34.79■■■■□ 3.16
PLXNB1-217ENST00000484485 ATAD2BQ9ULI0 1458 aa34.77■■■■□ 3.16
PLXNB1-217ENST00000484485 BAZ1AQ9NRL2 1556 aaPredicted RBP34.7■■■■□ 3.14
PLXNB1-217ENST00000484485 SMARCA2P51531 1590 aa34.61■■■■□ 3.13
PLXNB1-217ENST00000484485 MROH2BQ7Z745 1585 aa34.57■■■■□ 3.12
PLXNB1-217ENST00000484485 HMGXB3Q12766 1538 aa34.52■■■■□ 3.12
PLXNB1-217ENST00000484485 PEG3Q9GZU2 1588 aa34.5■■■■□ 3.11
PLXNB1-217ENST00000484485 BAZ1BQ9UIG0 1483 aaKnown RBP34.38■■■■□ 3.09
PLXNB1-217ENST00000484485 WIZO95785 1651 aa34.09■■■■□ 3.05
PLXNB1-217ENST00000484485 RSF1Q96T23 1441 aaPredicted RBP34.07■■■■□ 3.04
PLXNB1-217ENST00000484485 NESP48681 1621 aa34.07■■■■□ 3.04
PLXNB1-217ENST00000484485 ERCC6Q03468 1493 aa33.92■■■■□ 3.02
PLXNB1-217ENST00000484485 LAMC3Q9Y6N6 1575 aa33.83■■■■□ 3.01
PLXNB1-217ENST00000484485 CADPSQ9ULU8 1353 aa33.77■■■■□ 3
PLXNB1-217ENST00000484485 CUX2O14529 1486 aa33.75■■■□□ 2.99
PLXNB1-217ENST00000484485 TOP2AP11388 1531 aaKnown RBP33.72■■■□□ 2.99
PLXNB1-217ENST00000484485 PDS5BQ9NTI5 1447 aa33.64■■■□□ 2.98
PLXNB1-217ENST00000484485 THOC2Q8NI27 1593 aaKnown RBP33.55■■■□□ 2.96
PLXNB1-217ENST00000484485 KIF21AQ7Z4S6 1674 aa33.51■■■□□ 2.95
PLXNB1-217ENST00000484485 CFTRP13569 1480 aa33.5■■■□□ 2.95
PLXNB1-217ENST00000484485 CCDC88BA6NC98 1476 aa33.39■■■□□ 2.94
PLXNB1-217ENST00000484485 FANCD2Q9BXW9 1451 aa33.33■■■□□ 2.93
PLXNB1-217ENST00000484485 MRC2Q9UBG0 1479 aa33.33■■■□□ 2.93
PLXNB1-217ENST00000484485 CEP164Q9UPV0 1460 aa33.28■■■□□ 2.92
PLXNB1-217ENST00000484485 WDR62O43379 1518 aa33.24■■■□□ 2.91
PLXNB1-217ENST00000484485 DNAJC5Q9H3Z4 198 aa33.21■■■□□ 2.91
PLXNB1-217ENST00000484485 URB2Q14146 1524 aaKnown RBP33.07■■■□□ 2.88
PLXNB1-217ENST00000484485 PRDM2Q13029 1718 aa32.97■■■□□ 2.87
PLXNB1-217ENST00000484485 SUPT5HO00267 1087 aaKnown RBP32.88■■■□□ 2.85
PLXNB1-217ENST00000484485 TOPBP1Q92547 1522 aa32.77■■■□□ 2.84
PLXNB1-217ENST00000484485 ABCC8Q09428 1581 aa32.69■■■□□ 2.82
PLXNB1-217ENST00000484485 DNMBPQ6XZF7 1577 aa32.66■■■□□ 2.82
PLXNB1-217ENST00000484485 IFT140Q96RY7 1462 aa32.63■■■□□ 2.81
PLXNB1-217ENST00000484485 ZNF608Q9ULD9 1512 aaPredicted RBP32.57■■■□□ 2.8
PLXNB1-217ENST00000484485 POLA1P09884 1462 aaPredicted RBP32.48■■■□□ 2.79
PLXNB1-217ENST00000484485 TARBP1Q13395 1621 aaKnown RBP32.44■■■□□ 2.78
PLXNB1-217ENST00000484485 CUX1P39880 1505 aa32.42■■■□□ 2.78
PLXNB1-217ENST00000484485 RAD54L2Q9Y4B4 1467 aa32.37■■■□□ 2.77
PLXNB1-217ENST00000484485 AQRO60306 1485 aaKnown RBP eCLIP32.35■■■□□ 2.774e-9■■■□□ 14.6
PLXNB1-217ENST00000484485 SOGA1O94964 1423 aa32.34■■■□□ 2.77
PLXNB1-217ENST00000484485 FGD5Q6ZNL6 1462 aa32.34■■■□□ 2.77
PLXNB1-217ENST00000484485 OSCARQ8IYS5 282 aa32.33■■■□□ 2.77
PLXNB1-217ENST00000484485 EIF4G3O43432 1585 aaKnown RBP32.32■■■□□ 2.76
PLXNB1-217ENST00000484485 TDRD9Q8NDG6 1382 aaKnown RBP32.23■■■□□ 2.75
PLXNB1-217ENST00000484485 WDR97A6NE52 1622 aa32.08■■■□□ 2.73
PLXNB1-217ENST00000484485 WRNQ14191 1432 aaPredicted RBP eCLIP32.06■■■□□ 2.72
PLXNB1-217ENST00000484485 ABCA10Q8WWZ4 1543 aa32.02■■■□□ 2.72
PLXNB1-217ENST00000484485 TOP2BQ02880 1626 aa32■■■□□ 2.71
PLXNB1-217ENST00000484485 SYNJ1O43426 1573 aa32■■■□□ 2.71
PLXNB1-217ENST00000484485 SNAPC4Q5SXM2 1469 aa31.98■■■□□ 2.71
PLXNB1-217ENST00000484485 GRIN2BQ13224 1484 aa31.97■■■□□ 2.71
PLXNB1-217ENST00000484485 BIVM-ERCC5R4GMW8 1640 aa31.97■■■□□ 2.71
PLXNB1-217ENST00000484485 GAPVD1Q14C86 1478 aa31.94■■■□□ 2.7
PLXNB1-217ENST00000484485 FBLN2P98095 1184 aa31.93■■■□□ 2.7
PLXNB1-217ENST00000484485 CHD1O14646 1710 aa31.92■■■□□ 2.7
PLXNB1-217ENST00000484485 MAGI1Q96QZ7 1491 aaPredicted RBP31.91■■■□□ 2.7
PLXNB1-217ENST00000484485 ABCA5Q8WWZ7 1642 aa31.89■■■□□ 2.7
PLXNB1-217ENST00000484485 TRIM41Q8WV44 630 aa31.86■■■□□ 2.69
PLXNB1-217ENST00000484485 CHMP7Q8WUX9 453 aaPredicted RBP31.82■■■□□ 2.68
PLXNB1-217ENST00000484485 SYNJ2O15056 1496 aa31.81■■■□□ 2.68
PLXNB1-217ENST00000484485 ARHGEF11O15085 1522 aa31.79■■■□□ 2.68
PLXNB1-217ENST00000484485 RIMBP3CA6NJZ7 1639 aa31.78■■■□□ 2.68
PLXNB1-217ENST00000484485 RIMBP3BA6NNM3 1639 aa31.78■■■□□ 2.68
PLXNB1-217ENST00000484485 RIMBP3Q9UFD9 1639 aa31.78■■■□□ 2.68
PLXNB1-217ENST00000484485 PBRM1Q86U86 1689 aa31.76■■■□□ 2.68
PLXNB1-217ENST00000484485 CLASP1Q7Z460 1538 aa31.7■■■□□ 2.66
PLXNB1-217ENST00000484485 ADAMTS12P58397 1594 aa31.6■■■□□ 2.65
PLXNB1-217ENST00000484485 ERICH3Q5RHP9 1530 aa31.59■■■□□ 2.65
PLXNB1-217ENST00000484485 GRIN2AQ12879 1464 aa31.57■■■□□ 2.64
PLXNB1-217ENST00000484485 FHAD1B1AJZ9 1412 aa31.57■■■□□ 2.64
PLXNB1-217ENST00000484485 ARAP1Q96P48 1450 aa31.54■■■□□ 2.64
PLXNB1-217ENST00000484485 CYB5RLQ6IPT4 315 aa31.53■■■□□ 2.64
PLXNB1-217ENST00000484485 NUP160Q12769 1436 aa31.49■■■□□ 2.63
PLXNB1-217ENST00000484485 CEP170Q5SW79 1584 aa31.43■■■□□ 2.62
PLXNB1-217ENST00000484485 IGF1RP08069 1367 aa31.43■■■□□ 2.62
PLXNB1-217ENST00000484485 KIF27Q86VH2 1401 aa31.4■■■□□ 2.62
PLXNB1-217ENST00000484485 ERCC6L2Q5T890 1561 aa31.26■■■□□ 2.6
PLXNB1-217ENST00000484485 SHROOM2Q13796 1616 aa31.24■■■□□ 2.59
PLXNB1-217ENST00000484485 JPH4Q96JJ6 628 aa31.17■■■□□ 2.58
PLXNB1-217ENST00000484485 CARMIL1Q5VZK9 1371 aa31.17■■■□□ 2.58
PLXNB1-217ENST00000484485 CUL7Q14999 1698 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms