RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 SRPK2P78362 688 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP2-216ENST00000483412 CLSTN1O94985 981 aa11.95□□□□□ -0.5
CDK5RAP2-216ENST00000483412 NOL8Q76FK4 1167 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP2-216ENST00000483412 STK26Q9P289 416 aa11.95□□□□□ -0.5
CDK5RAP2-216ENST00000483412 PRKCSHP14314 528 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP2-216ENST00000483412 HSP90B1P14625 803 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP2-216ENST00000483412 PDE4AP27815 886 aa11.93□□□□□ -0.5
CDK5RAP2-216ENST00000483412 FOXD4L5Q5VV16 416 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP2-216ENST00000483412 FOXD4L4Q8WXT5 416 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP2-216ENST00000483412 FANCIQ9NVI1 1328 aa11.93□□□□□ -0.5
CDK5RAP2-216ENST00000483412 ROCK2O75116 1388 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP2-216ENST00000483412 SOX12O15370 315 aa11.92□□□□□ -0.5
CDK5RAP2-216ENST00000483412 PHF14O94880 888 aa11.92□□□□□ -0.5
CDK5RAP2-216ENST00000483412 CSPP1Q1MSJ5 1256 aa11.92□□□□□ -0.5
CDK5RAP2-216ENST00000483412 WASHC2CQ9Y4E1 1318 aa11.92□□□□□ -0.5
CDK5RAP2-216ENST00000483412 TOPBP1Q92547 1522 aa11.92□□□□□ -0.5
CDK5RAP2-216ENST00000483412 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
CDK5RAP2-216ENST00000483412 RTF1Q92541 710 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP2-216ENST00000483412 CUX1P39880 1505 aa11.9□□□□□ -0.5
CDK5RAP2-216ENST00000483412 SMC4Q9NTJ3 1288 aa11.9□□□□□ -0.5
CDK5RAP2-216ENST00000483412 NPHP1O15259 732 aa11.9□□□□□ -0.5
CDK5RAP2-216ENST00000483412 U2AF1L5P0DN76 240 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP2-216ENST00000483412 U2AF1Q01081 240 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDK5RAP2-216ENST00000483412 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
CDK5RAP2-216ENST00000483412 IFT140Q96RY7 1462 aa11.9□□□□□ -0.5
CDK5RAP2-216ENST00000483412 TRIM6-TRIM34B2RNG4 842 aa11.9□□□□□ -0.5
CDK5RAP2-216ENST00000483412 FAM161AQ3B820 660 aa11.9□□□□□ -0.5
CDK5RAP2-216ENST00000483412 CLUAP1Q96AJ1 413 aa11.9□□□□□ -0.5
CDK5RAP2-216ENST00000483412 KIF21BO75037 1637 aa11.9□□□□□ -0.5
CDK5RAP2-216ENST00000483412 TOP2BQ02880 1626 aa11.9□□□□□ -0.5
CDK5RAP2-216ENST00000483412 ZNF771Q7L3S4 317 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP2-216ENST00000483412 CENPJQ9HC77 1338 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP2-216ENST00000483412 POLA1P09884 1462 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP2-216ENST00000483412 A0A0U1RQG5 324 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP2-216ENST00000483412 DDX49Q9Y6V7 483 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP2-216ENST00000483412 ST18O60284 1047 aa11.87□□□□□ -0.51
CDK5RAP2-216ENST00000483412 L3MBTL2Q969R5 705 aa11.87□□□□□ -0.51
CDK5RAP2-216ENST00000483412 ERICH3Q5RHP9 1530 aa11.87□□□□□ -0.51
CDK5RAP2-216ENST00000483412 CENPQQ7L2Z9 268 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP2-216ENST00000483412 PDE3BQ13370 1112 aa11.87□□□□□ -0.51
CDK5RAP2-216ENST00000483412 NUTM2DQ5VT03 806 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP2-216ENST00000483412 SKOR2Q2VWA4 1001 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP2-216ENST00000483412 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP2-216ENST00000483412 EXOC6Q8TAG9 804 aa11.86□□□□□ -0.51
CDK5RAP2-216ENST00000483412 SETQ01105 290 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP2-216ENST00000483412 ISY1Q9ULR0 285 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP2-216ENST00000483412 PLIN1O60240 522 aa11.85□□□□□ -0.51
CDK5RAP2-216ENST00000483412 FAM13BQ9NYF5 915 aa11.85□□□□□ -0.51
CDK5RAP2-216ENST00000483412 DNMBPQ6XZF7 1577 aa11.85□□□□□ -0.51
CDK5RAP2-216ENST00000483412 CREBRFQ8IUR6 639 aa11.84□□□□□ -0.51
CDK5RAP2-216ENST00000483412 RRP1P56182 461 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP2-216ENST00000483412 HDGFL2Q7Z4V5 671 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP2-216ENST00000483412 EIF3AQ14152 1382 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP2-216ENST00000483412 CASKIN1Q8WXD9 1431 aa11.83□□□□□ -0.51
CDK5RAP2-216ENST00000483412 CRBNQ96SW2 442 aa11.83□□□□□ -0.51
CDK5RAP2-216ENST00000483412 GPATCH3Q96I76 525 aa11.83□□□□□ -0.52
CDK5RAP2-216ENST00000483412 PRG4Q92954 1404 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP2-216ENST00000483412 KIF16BQ96L93 1317 aa11.83□□□□□ -0.52
CDK5RAP2-216ENST00000483412 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
CDK5RAP2-216ENST00000483412 FOXD4L6Q3SYB3 417 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP2-216ENST00000483412 FOXD4L3Q6VB84 417 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP2-216ENST00000483412 MYOM3Q5VTT5 1437 aa11.82□□□□□ -0.52
CDK5RAP2-216ENST00000483412 DHX57Q6P158 1386 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP2-216ENST00000483412 FGD6Q6ZV73 1430 aa11.82□□□□□ -0.52
CDK5RAP2-216ENST00000483412 HMMRO75330 724 aa11.82□□□□□ -0.52
CDK5RAP2-216ENST00000483412 NLRP13Q86W25 1043 aa11.82□□□□□ -0.52
CDK5RAP2-216ENST00000483412 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
CDK5RAP2-216ENST00000483412 TPM3P06753 285 aa11.82□□□□□ -0.52
CDK5RAP2-216ENST00000483412 LRRC9Q6ZRR7 1453 aa11.82□□□□□ -0.52
CDK5RAP2-216ENST00000483412 PDE4CQ08493 712 aa11.82□□□□□ -0.52
CDK5RAP2-216ENST00000483412 ZNF592Q92610 1267 aa11.82□□□□□ -0.52
CDK5RAP2-216ENST00000483412 ZNF644Q9H582 1327 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP2-216ENST00000483412 CCAR2Q8N163 923 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP2-216ENST00000483412 EID1Q9Y6B2 187 aa11.81□□□□□ -0.52
CDK5RAP2-216ENST00000483412 FAM69CQ0P6D2 419 aa11.81□□□□□ -0.52
CDK5RAP2-216ENST00000483412 KIF15Q9NS87 1388 aa11.8□□□□□ -0.52
CDK5RAP2-216ENST00000483412 SLC4A10Q6U841 1118 aa11.8□□□□□ -0.52
CDK5RAP2-216ENST00000483412 LAMC3Q9Y6N6 1575 aa11.8□□□□□ -0.52
CDK5RAP2-216ENST00000483412 UNC13AQ9UPW8 1703 aa11.8□□□□□ -0.52
CDK5RAP2-216ENST00000483412 CCDC34Q96HJ3 373 aa11.8□□□□□ -0.52
CDK5RAP2-216ENST00000483412 ARAP1Q96P48 1450 aa11.79□□□□□ -0.52
CDK5RAP2-216ENST00000483412 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
CDK5RAP2-216ENST00000483412 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP2-216ENST00000483412 DNAJC5BQ9UF47 199 aa11.79□□□□□ -0.52
CDK5RAP2-216ENST00000483412 ZBED9Q6R2W3 1325 aa11.79□□□□□ -0.52
CDK5RAP2-216ENST00000483412 MYBBP1AQ9BQG0 1328 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP2-216ENST00000483412 GOLGA6L19H0YKK7 550 aa11.79□□□□□ -0.52
CDK5RAP2-216ENST00000483412 STK31Q9BXU1 1019 aa11.79□□□□□ -0.52
CDK5RAP2-216ENST00000483412 PODXL2Q9NZ53 605 aa11.79□□□□□ -0.52
CDK5RAP2-216ENST00000483412 PRXQ9BXM0 1461 aa11.79□□□□□ -0.52
CDK5RAP2-216ENST00000483412 NCOA2Q15596 1464 aa11.78□□□□□ -0.52
CDK5RAP2-216ENST00000483412 FYCO1Q9BQS8 1478 aa11.78□□□□□ -0.52
CDK5RAP2-216ENST00000483412 FAM43AQ8N2R8 423 aa11.78□□□□□ -0.52
CDK5RAP2-216ENST00000483412 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP2-216ENST00000483412 SF3A1Q15459 793 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP2-216ENST00000483412 SYNJ2O15056 1496 aa11.77□□□□□ -0.52
CDK5RAP2-216ENST00000483412 RASSF8Q8NHQ8 419 aa11.77□□□□□ -0.52
CDK5RAP2-216ENST00000483412 ANKRD45Q5TZF3 282 aa11.77□□□□□ -0.53
CDK5RAP2-216ENST00000483412 EFCAB5A4FU69 1503 aa11.77□□□□□ -0.53
CDK5RAP2-216ENST00000483412 GPS2Q13227 327 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms