RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 NISCHQ9Y2I1 1504 aa16.46■□□□□ 0.23
CDK5RAP2-216ENST00000483412 DCAF8L2P0C7V8 631 aa16.31■□□□□ 0.2
CDK5RAP2-216ENST00000483412 SUPT5HO00267 1087 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP2-216ENST00000483412 PELP1Q8IZL8 1130 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP2-216ENST00000483412 SHROOM4Q9ULL8 1493 aa15.34■□□□□ 0.05
CDK5RAP2-216ENST00000483412 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
CDK5RAP2-216ENST00000483412 PCGF6Q9BYE7 350 aa14.88□□□□□ -0.03
CDK5RAP2-216ENST00000483412 MYT1Q01538 1121 aa14.87□□□□□ -0.03
CDK5RAP2-216ENST00000483412 ERICH6Q7L0X2 663 aa14.85□□□□□ -0.03
CDK5RAP2-216ENST00000483412 CENPBP07199 599 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP2-216ENST00000483412 APLP2Q06481 763 aa14.74□□□□□ -0.05
CDK5RAP2-216ENST00000483412 TTBK1Q5TCY1 1321 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP2-216ENST00000483412 CCER1Q8TC90 406 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP2-216ENST00000483412 ZEB1P37275 1124 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP2-216ENST00000483412 FAM9AQ8IZU1 332 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP2-216ENST00000483412 YTHDC1Q96MU7 727 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP2-216ENST00000483412 NEFLP07196 543 aa14.4□□□□□ -0.1
CDK5RAP2-216ENST00000483412 RANGAP1P46060 587 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP2-216ENST00000483412 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
CDK5RAP2-216ENST00000483412 ABCC9O60706 1549 aa14.2□□□□□ -0.14
CDK5RAP2-216ENST00000483412 HRCP23327 699 aa14.2□□□□□ -0.14
CDK5RAP2-216ENST00000483412 ATP1B4Q9UN42 357 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP2-216ENST00000483412 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP2-216ENST00000483412 TRIM26Q12899 539 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP2-216ENST00000483412 UBTFP17480 764 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP2-216ENST00000483412 DAXXQ9UER7 740 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP2-216ENST00000483412 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDK5RAP2-216ENST00000483412 RTL5Q5HYW3 569 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP2-216ENST00000483412 POLR3GLQ9BT43 218 aa13.82□□□□□ -0.2
CDK5RAP2-216ENST00000483412 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP2-216ENST00000483412 LOC105371045A0A1W2PR82 267 aa13.8□□□□□ -0.2
CDK5RAP2-216ENST00000483412 ITGAEP38570 1179 aa13.79□□□□□ -0.2
CDK5RAP2-216ENST00000483412 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP2-216ENST00000483412 CHIC1Q5VXU3 224 aa13.74□□□□□ -0.21
CDK5RAP2-216ENST00000483412 CNGB1Q14028 1251 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP2-216ENST00000483412 ZNF316A6NFI3 1004 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP2-216ENST00000483412 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
CDK5RAP2-216ENST00000483412 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
CDK5RAP2-216ENST00000483412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP2-216ENST00000483412 BCANQ96GW7 911 aa13.67□□□□□ -0.22
CDK5RAP2-216ENST00000483412 ZCCHC6Q5VYS8 1495 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP2-216ENST00000483412 SCRIBQ14160 1630 aa13.62□□□□□ -0.23
CDK5RAP2-216ENST00000483412 CLSPNQ9HAW4 1339 aa13.61□□□□□ -0.23
CDK5RAP2-216ENST00000483412 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.24
CDK5RAP2-216ENST00000483412 ACIN1Q9UKV3 1341 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP2-216ENST00000483412 MYT1LQ9UL68 1186 aa13.46□□□□□ -0.25
CDK5RAP2-216ENST00000483412 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP2-216ENST00000483412 NEUROD1Q13562 356 aa13.4□□□□□ -0.26
CDK5RAP2-216ENST00000483412 ANP32CO43423 234 aa13.39□□□□□ -0.27
CDK5RAP2-216ENST00000483412 RB1CC1Q8TDY2 1594 aa13.38□□□□□ -0.27
CDK5RAP2-216ENST00000483412 FAM50AQ14320 339 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP2-216ENST00000483412 EIF5BO60841 1220 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP2-216ENST00000483412 ANP32AP39687 249 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP2-216ENST00000483412 FBLN2P98095 1184 aa13.3□□□□□ -0.28
CDK5RAP2-216ENST00000483412 TRIM52Q96A61 297 aa13.3□□□□□ -0.28
CDK5RAP2-216ENST00000483412 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
CDK5RAP2-216ENST00000483412 NPM2Q86SE8 214 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP2-216ENST00000483412 NACADO15069 1562 aa13.26□□□□□ -0.29
CDK5RAP2-216ENST00000483412 FKBP8Q14318 412 aa13.2□□□□□ -0.3
CDK5RAP2-216ENST00000483412 ZNF326Q5BKZ1 582 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP2-216ENST00000483412 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP2-216ENST00000483412 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
CDK5RAP2-216ENST00000483412 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP2-216ENST00000483412 BCL11AQ9H165 835 aa13.17□□□□□ -0.3
CDK5RAP2-216ENST00000483412 P3H3Q8IVL6 736 aa13.15□□□□□ -0.31
CDK5RAP2-216ENST00000483412 GLIPR1L2Q4G1C9 344 aa13.14□□□□□ -0.31
CDK5RAP2-216ENST00000483412 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP2-216ENST00000483412 NBR1Q14596 966 aa13.12□□□□□ -0.31
CDK5RAP2-216ENST00000483412 ARID3CA6NKF2 412 aa13.08□□□□□ -0.32
CDK5RAP2-216ENST00000483412 ANP32BQ92688 251 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP2-216ENST00000483412 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP2-216ENST00000483412 DCAF1Q9Y4B6 1507 aa13.05□□□□□ -0.32
CDK5RAP2-216ENST00000483412 HNRNPUQ00839 825 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDK5RAP2-216ENST00000483412 BAZ1BQ9UIG0 1483 aaKnown RBP13□□□□□ -0.33
CDK5RAP2-216ENST00000483412 HSP90AA1P07900 732 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP2-216ENST00000483412 ARXQ96QS3 562 aa12.98□□□□□ -0.33
CDK5RAP2-216ENST00000483412 FAM9BQ8IZU0 186 aa12.95□□□□□ -0.34
CDK5RAP2-216ENST00000483412 UPF2Q9HAU5 1272 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP2-216ENST00000483412 DDX10Q13206 875 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP2-216ENST00000483412 NEFMP07197 916 aa12.93□□□□□ -0.34
CDK5RAP2-216ENST00000483412 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP2-216ENST00000483412 CCDC136Q96JN2 1154 aa12.92□□□□□ -0.34
CDK5RAP2-216ENST00000483412 ZNF777Q9ULD5 760 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP2-216ENST00000483412 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
CDK5RAP2-216ENST00000483412 IRX6P78412 446 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP2-216ENST00000483412 MIER1Q8N108 512 aa12.88□□□□□ -0.35
CDK5RAP2-216ENST00000483412 ANP32EQ9BTT0 268 aa12.88□□□□□ -0.35
CDK5RAP2-216ENST00000483412 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP2-216ENST00000483412 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
CDK5RAP2-216ENST00000483412 CHMP7Q8WUX9 453 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP2-216ENST00000483412 WRNQ14191 1432 aaPredicted RBP eCLIP12.84□□□□□ -0.35
CDK5RAP2-216ENST00000483412 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
CDK5RAP2-216ENST00000483412 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP2-216ENST00000483412 EEA1Q15075 1411 aa12.77□□□□□ -0.37
CDK5RAP2-216ENST00000483412 CLIP1P30622 1438 aa12.77□□□□□ -0.37
CDK5RAP2-216ENST00000483412 TMC1Q8TDI8 760 aa12.76□□□□□ -0.37
CDK5RAP2-216ENST00000483412 ERCC6Q03468 1493 aa12.76□□□□□ -0.37
CDK5RAP2-216ENST00000483412 MROH2BQ7Z745 1585 aa12.76□□□□□ -0.37
CDK5RAP2-216ENST00000483412 MRS2Q9HD23 443 aa12.75□□□□□ -0.37
CDK5RAP2-216ENST00000483412 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms