RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 ABCC5O15440 1437 aa35.36■■■■□ 3.25
CYTH3-208ENST00000482460 SHANK2Q9UPX8 1470 aa35.34■■■■□ 3.25
CYTH3-208ENST00000482460 CROCC2H7BZ55 1655 aa35.33■■■■□ 3.25
CYTH3-208ENST00000482460 EIF2AK4Q9P2K8 1649 aaKnown RBP35.31■■■■□ 3.24
CYTH3-208ENST00000482460 DAPK1P53355 1430 aa35.31■■■■□ 3.24
CYTH3-208ENST00000482460 DNMT1P26358 1616 aaKnown RBP35.3■■■■□ 3.24
CYTH3-208ENST00000482460 MYO3AQ8NEV4 1616 aa35.3■■■■□ 3.24
CYTH3-208ENST00000482460 RNF17Q9BXT8 1623 aaKnown RBP35.3■■■■□ 3.24
CYTH3-208ENST00000482460 DUOX2Q9NRD8 1548 aa35.3■■■■□ 3.24
CYTH3-208ENST00000482460 FBXO41Q8TF61 875 aa35.28■■■■□ 3.24
CYTH3-208ENST00000482460 ZNF142P52746 1687 aaPredicted RBP35.27■■■■□ 3.24
CYTH3-208ENST00000482460 NCOA1Q15788 1441 aa35.27■■■■□ 3.24
CYTH3-208ENST00000482460 PZPP20742 1482 aa35.27■■■■□ 3.24
CYTH3-208ENST00000482460 CAMSAP1Q5T5Y3 1602 aa35.26■■■■□ 3.24
CYTH3-208ENST00000482460 KIF15Q9NS87 1388 aa35.25■■■■□ 3.23
CYTH3-208ENST00000482460 PTPRTO14522 1441 aa35.25■■■■□ 3.23
CYTH3-208ENST00000482460 FBXO31Q5XUX0 539 aaPredicted RBP35.25■■■■□ 3.23
CYTH3-208ENST00000482460 CEP170BQ9Y4F5 1589 aaPredicted RBP35.25■■■■□ 3.23
CYTH3-208ENST00000482460 RRP7BPQ9NSQ0 103 aa35.24■■■■□ 3.23
CYTH3-208ENST00000482460 TNRQ92752 1358 aa35.21■■■■□ 3.23
CYTH3-208ENST00000482460 ZC3H13Q5T200 1668 aaKnown RBP35.19■■■■□ 3.22
CYTH3-208ENST00000482460 ABCC3O15438 1527 aa35.18■■■■□ 3.22
CYTH3-208ENST00000482460 A2ML1A8K2U0 1454 aa35.18■■■■□ 3.22
CYTH3-208ENST00000482460 ERBINQ96RT1 1412 aa35.18■■■■□ 3.22
CYTH3-208ENST00000482460 CERKQ8TCT0 537 aa35.18■■■■□ 3.22
CYTH3-208ENST00000482460 CHIC2Q9UKJ5 165 aa35.18■■■■□ 3.22
CYTH3-208ENST00000482460 MROH1Q8NDA8 1641 aa35.17■■■■□ 3.22
CYTH3-208ENST00000482460 ANKRD30AQ9BXX3 1397 aa35.16■■■■□ 3.22
CYTH3-208ENST00000482460 FAM50AQ14320 339 aaKnown RBP35.16■■■■□ 3.22
CYTH3-208ENST00000482460 PLA2R1Q13018 1463 aa35.16■■■■□ 3.22
CYTH3-208ENST00000482460 NCKAP5LQ9HCH0 1330 aa35.13■■■■□ 3.21
CYTH3-208ENST00000482460 PKD2Q13563 968 aa35.12■■■■□ 3.21
CYTH3-208ENST00000482460 CEP152O94986 1710 aa35.09■■■■□ 3.21
CYTH3-208ENST00000482460 PRDM15P57071 1507 aaPredicted RBP35.06■■■■□ 3.2
CYTH3-208ENST00000482460 ADGRL2O95490 1459 aa35.06■■■■□ 3.2
CYTH3-208ENST00000482460 NLRP1Q9C000 1473 aa35.06■■■■□ 3.2
CYTH3-208ENST00000482460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.03■■■■□ 3.2
CYTH3-208ENST00000482460 SPATA31D1Q6ZQQ2 1576 aa35.03■■■■□ 3.2
CYTH3-208ENST00000482460 DEPDC5O75140 1603 aa35.03■■■■□ 3.2
CYTH3-208ENST00000482460 ERVK-7P63135 1459 aa35.01■■■■□ 3.19
CYTH3-208ENST00000482460 CFAP65Q6ZU64 1925 aaKnown RBP35■■■■□ 3.19
CYTH3-208ENST00000482460 KANK1Q14678 1352 aa35■■■■□ 3.19
CYTH3-208ENST00000482460 THEMISQ8N1K5 641 aaPredicted RBP34.99■■■■□ 3.19
CYTH3-208ENST00000482460 ARHGAP31Q2M1Z3 1444 aa34.98■■■■□ 3.19
CYTH3-208ENST00000482460 UGGT1Q9NYU2 1555 aa34.97■■■■□ 3.19
CYTH3-208ENST00000482460 LTBP4Q8N2S1 1624 aa34.95■■■■□ 3.19
CYTH3-208ENST00000482460 PPARGC1BQ86YN6 1023 aaKnown RBP34.95■■■■□ 3.19
CYTH3-208ENST00000482460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.93■■■■□ 3.18
CYTH3-208ENST00000482460 ANKLE2Q86XL3 938 aa34.91■■■■□ 3.18
CYTH3-208ENST00000482460 POLR1AO95602 1720 aaPredicted RBP34.91■■■■□ 3.18
CYTH3-208ENST00000482460 ANKRD50Q9ULJ7 1429 aa34.9■■■■□ 3.18
CYTH3-208ENST00000482460 VWDEQ8N2E2 1590 aa34.9■■■■□ 3.18
CYTH3-208ENST00000482460 LMTK2Q8IWU2 1503 aa34.89■■■■□ 3.18
CYTH3-208ENST00000482460 ZNF335Q9H4Z2 1342 aaPredicted RBP34.87■■■■□ 3.17
CYTH3-208ENST00000482460 NEURL4Q96JN8 1562 aa34.85■■■■□ 3.17
CYTH3-208ENST00000482460 ROCK1Q13464 1354 aa34.83■■■■□ 3.17
CYTH3-208ENST00000482460 IQSEC2Q5JU85 1478 aa34.81■■■■□ 3.16
CYTH3-208ENST00000482460 UBR1Q8IWV7 1749 aa34.79■■■■□ 3.16
CYTH3-208ENST00000482460 MED14O60244 1454 aa34.78■■■■□ 3.16
CYTH3-208ENST00000482460 EFCAB6Q5THR3 1501 aa34.76■■■■□ 3.15
CYTH3-208ENST00000482460 NPHP4O75161 1426 aaPredicted RBP34.75■■■■□ 3.15
CYTH3-208ENST00000482460 ITGAEP38570 1179 aa34.75■■■■□ 3.15
CYTH3-208ENST00000482460 NOS1P29475 1434 aa34.7■■■■□ 3.15
CYTH3-208ENST00000482460 PIK3C2BO00750 1634 aa34.69■■■■□ 3.14
CYTH3-208ENST00000482460 UNC13BO14795 1591 aa34.68■■■■□ 3.14
CYTH3-208ENST00000482460 IQGAP1P46940 1657 aa34.68■■■■□ 3.14
CYTH3-208ENST00000482460 IDI1Q13907 227 aa34.68■■■■□ 3.14
CYTH3-208ENST00000482460 RPRD2Q5VT52 1461 aaKnown RBP34.67■■■■□ 3.14
CYTH3-208ENST00000482460 SLIT1O75093 1534 aa34.66■■■■□ 3.14
CYTH3-208ENST00000482460 ARHGAP23Q9P227 1491 aa34.66■■■■□ 3.14
CYTH3-208ENST00000482460 STAG3Q9UJ98 1225 aa34.66■■■■□ 3.14
CYTH3-208ENST00000482460 TET3O43151 1660 aa34.66■■■■□ 3.14
CYTH3-208ENST00000482460 SYNMO15061 1565 aa34.66■■■■□ 3.14
CYTH3-208ENST00000482460 RRBP1Q9P2E9 1410 aaKnown RBP34.65■■■■□ 3.14
CYTH3-208ENST00000482460 SCAF11Q99590 1463 aaKnown RBP34.64■■■■□ 3.14
CYTH3-208ENST00000482460 KDM5AP29375 1690 aaKnown RBP34.63■■■■□ 3.13
CYTH3-208ENST00000482460 LTKP29376 864 aa34.63■■■■□ 3.13
CYTH3-208ENST00000482460 TXNDC2Q86VQ3 553 aa34.63■■■■□ 3.13
CYTH3-208ENST00000482460 SLC52A1Q9NWF4 448 aa34.62■■■■□ 3.13
CYTH3-208ENST00000482460 CPS1P31327 1500 aa34.61■■■■□ 3.13
CYTH3-208ENST00000482460 EID1Q9Y6B2 187 aa34.61■■■■□ 3.13
CYTH3-208ENST00000482460 GCC2Q8IWJ2 1684 aa34.6■■■■□ 3.13
CYTH3-208ENST00000482460 TMEM2Q9UHN6 1383 aa34.59■■■■□ 3.13
CYTH3-208ENST00000482460 IQGAP3Q86VI3 1631 aa34.55■■■■□ 3.12
CYTH3-208ENST00000482460 NUP155O75694 1391 aa34.54■■■■□ 3.12
CYTH3-208ENST00000482460 UBAP1LF5GYI3 381 aa34.53■■■■□ 3.12
CYTH3-208ENST00000482460 ADGRB3O60242 1522 aa34.51■■■■□ 3.12
CYTH3-208ENST00000482460 E9PCH4 1651 aa34.5■■■■□ 3.11
CYTH3-208ENST00000482460 STRCP1A6NGW2 1772 aa34.45■■■■□ 3.11
CYTH3-208ENST00000482460 NAIPQ13075 1403 aa34.4■■■■□ 3.1
CYTH3-208ENST00000482460 MYO5BQ9ULV0 1848 aa34.39■■■■□ 3.1
CYTH3-208ENST00000482460 TOM1O60784 492 aa34.39■■■■□ 3.1
CYTH3-208ENST00000482460 TMEM131LA2VDJ0 1609 aa34.38■■■■□ 3.09
CYTH3-208ENST00000482460 LRRC7Q96NW7 1537 aa34.37■■■■□ 3.09
CYTH3-208ENST00000482460 HDGFP51858 240 aaKnown RBP34.36■■■■□ 3.09
CYTH3-208ENST00000482460 ZFYVE9O95405 1425 aa34.34■■■■□ 3.09
CYTH3-208ENST00000482460 CHGAP10645 457 aaKnown RBP34.34■■■■□ 3.09
CYTH3-208ENST00000482460 RIMS2Q9UQ26 1411 aa34.31■■■■□ 3.08
CYTH3-208ENST00000482460 SLC26A8Q96RN1 970 aa34.31■■■■□ 3.08
CYTH3-208ENST00000482460 HFM1A2PYH4 1435 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms