RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 IQSEC2Q5JU85 1478 aa16.63■□□□□ 0.25
DDX39B-220ENST00000482195 NCKAP5LQ9HCH0 1330 aa16.63■□□□□ 0.25
DDX39B-220ENST00000482195 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
DDX39B-220ENST00000482195 PTPRKQ15262 1439 aa16.61■□□□□ 0.25
DDX39B-220ENST00000482195 ZNF335Q9H4Z2 1342 aaPredicted RBP16.59■□□□□ 0.25
DDX39B-220ENST00000482195 ZNF644Q9H582 1327 aaPredicted RBP16.59■□□□□ 0.25
DDX39B-220ENST00000482195 PLA2R1Q13018 1463 aa16.59■□□□□ 0.25
DDX39B-220ENST00000482195 POLR1AO95602 1720 aaPredicted RBP16.59■□□□□ 0.25
DDX39B-220ENST00000482195 ILDR2Q71H61 639 aa16.58■□□□□ 0.24
DDX39B-220ENST00000482195 TCOF1Q13428 1488 aaKnown RBP16.55■□□□□ 0.24
DDX39B-220ENST00000482195 CEP162Q5TB80 1403 aa16.55■□□□□ 0.24
DDX39B-220ENST00000482195 PKD2Q13563 968 aa16.55■□□□□ 0.24
DDX39B-220ENST00000482195 DNMT1P26358 1616 aaKnown RBP16.55■□□□□ 0.24
DDX39B-220ENST00000482195 A2ML1A8K2U0 1454 aa16.54■□□□□ 0.24
DDX39B-220ENST00000482195 CAMSAP2Q08AD1 1489 aa16.54■□□□□ 0.24
DDX39B-220ENST00000482195 CCDC141Q6ZP82 1450 aa16.54■□□□□ 0.24
DDX39B-220ENST00000482195 MBD5Q9P267 1494 aa16.54■□□□□ 0.24
DDX39B-220ENST00000482195 UBAP1LF5GYI3 381 aa16.54■□□□□ 0.24
DDX39B-220ENST00000482195 KDM5DQ9BY66 1539 aa16.54■□□□□ 0.24
DDX39B-220ENST00000482195 RTEL1-TNFRSF6BF6WH68 1400 aa16.53■□□□□ 0.24
DDX39B-220ENST00000482195 NCOA2Q15596 1464 aa16.52■□□□□ 0.23
DDX39B-220ENST00000482195 DHX29Q7Z478 1369 aaKnown RBP16.51■□□□□ 0.23
DDX39B-220ENST00000482195 SOCS7O14512 581 aa16.5■□□□□ 0.23
DDX39B-220ENST00000482195 KIF3BO15066 747 aa16.5■□□□□ 0.23
DDX39B-220ENST00000482195 TNRQ92752 1358 aa16.5■□□□□ 0.23
DDX39B-220ENST00000482195 FAM135AQ9P2D6 1515 aa16.49■□□□□ 0.23
DDX39B-220ENST00000482195 PZPP20742 1482 aa16.48■□□□□ 0.23
DDX39B-220ENST00000482195 NEURL4Q96JN8 1562 aa16.48■□□□□ 0.23
DDX39B-220ENST00000482195 ARHGEF5Q12774 1597 aa16.47■□□□□ 0.23
DDX39B-220ENST00000482195 FBXO31Q5XUX0 539 aaPredicted RBP16.46■□□□□ 0.23
DDX39B-220ENST00000482195 WASHC2CQ9Y4E1 1318 aa16.45■□□□□ 0.22
DDX39B-220ENST00000482195 CPS1P31327 1500 aa16.44■□□□□ 0.22
DDX39B-220ENST00000482195 ZC3H13Q5T200 1668 aaKnown RBP16.43■□□□□ 0.22
DDX39B-220ENST00000482195 CFAP65Q6ZU64 1925 aaKnown RBP16.43■□□□□ 0.22
DDX39B-220ENST00000482195 UGGT1Q9NYU2 1555 aa16.43■□□□□ 0.22
DDX39B-220ENST00000482195 RNF17Q9BXT8 1623 aaKnown RBP16.42■□□□□ 0.22
DDX39B-220ENST00000482195 PIP4K2BP78356 416 aa16.42■□□□□ 0.22
DDX39B-220ENST00000482195 CEP152O94986 1710 aa16.42■□□□□ 0.22
DDX39B-220ENST00000482195 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.41■□□□□ 0.22
DDX39B-220ENST00000482195 IQGAP1P46940 1657 aa16.41■□□□□ 0.22
DDX39B-220ENST00000482195 NLRP1Q9C000 1473 aa16.41■□□□□ 0.22
DDX39B-220ENST00000482195 SHANK2Q9UPX8 1470 aa16.41■□□□□ 0.22
DDX39B-220ENST00000482195 TSPY4P0CV99 314 aa16.4■□□□□ 0.22
DDX39B-220ENST00000482195 TSPY10P0CW01 314 aa16.4■□□□□ 0.22
DDX39B-220ENST00000482195 RSPH4AQ5TD94 716 aa16.4■□□□□ 0.22
DDX39B-220ENST00000482195 DEPDC5O75140 1603 aa16.39■□□□□ 0.21
DDX39B-220ENST00000482195 EIF2AK4Q9P2K8 1649 aaKnown RBP16.39■□□□□ 0.21
DDX39B-220ENST00000482195 VWDEQ8N2E2 1590 aa16.38■□□□□ 0.21
DDX39B-220ENST00000482195 MAST1Q9Y2H9 1570 aa16.38■□□□□ 0.21
DDX39B-220ENST00000482195 MIA2Q96PC5 1412 aa16.38■□□□□ 0.21
DDX39B-220ENST00000482195 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
DDX39B-220ENST00000482195 ANKLE2Q86XL3 938 aa16.38■□□□□ 0.21
DDX39B-220ENST00000482195 ABCC3O15438 1527 aa16.38■□□□□ 0.21
DDX39B-220ENST00000482195 MED1Q15648 1581 aaPredicted RBP16.38■□□□□ 0.21
DDX39B-220ENST00000482195 NPHP4O75161 1426 aaPredicted RBP16.37■□□□□ 0.21
DDX39B-220ENST00000482195 THEMISQ8N1K5 641 aaPredicted RBP16.37■□□□□ 0.21
DDX39B-220ENST00000482195 VPS8Q8N3P4 1428 aa16.36■□□□□ 0.21
DDX39B-220ENST00000482195 TOM1O60784 492 aa16.36■□□□□ 0.21
DDX39B-220ENST00000482195 HSPA1LP34931 641 aa16.35■□□□□ 0.21
DDX39B-220ENST00000482195 ERVK-7P63135 1459 aa16.34■□□□□ 0.21
DDX39B-220ENST00000482195 MROH1Q8NDA8 1641 aa16.34■□□□□ 0.21
DDX39B-220ENST00000482195 STRCP1A6NGW2 1772 aa16.33■□□□□ 0.21
DDX39B-220ENST00000482195 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
DDX39B-220ENST00000482195 SYNMO15061 1565 aa16.33■□□□□ 0.2
DDX39B-220ENST00000482195 CROCC2H7BZ55 1655 aa16.33■□□□□ 0.2
DDX39B-220ENST00000482195 UBR1Q8IWV7 1749 aa16.33■□□□□ 0.2
DDX39B-220ENST00000482195 MED14O60244 1454 aa16.32■□□□□ 0.2
DDX39B-220ENST00000482195 DUOX2Q9NRD8 1548 aa16.3■□□□□ 0.2
DDX39B-220ENST00000482195 MYOM3Q5VTT5 1437 aa16.3■□□□□ 0.2
DDX39B-220ENST00000482195 ALKQ9UM73 1620 aa16.27■□□□□ 0.2
DDX39B-220ENST00000482195 ATXN8OSP0DMR3 200 aa16.27■□□□□ 0.2
DDX39B-220ENST00000482195 PTPN23Q9H3S7 1636 aa16.27■□□□□ 0.19
DDX39B-220ENST00000482195 PRDM15P57071 1507 aaPredicted RBP16.26■□□□□ 0.19
DDX39B-220ENST00000482195 MAP3K1Q13233 1512 aa16.26■□□□□ 0.19
DDX39B-220ENST00000482195 KANK4Q5T7N3 995 aaPredicted RBP16.26■□□□□ 0.19
DDX39B-220ENST00000482195 LRRC7Q96NW7 1537 aa16.25■□□□□ 0.19
DDX39B-220ENST00000482195 SCAF11Q99590 1463 aaKnown RBP16.25■□□□□ 0.19
DDX39B-220ENST00000482195 LOC105371045A0A1W2PR82 267 aa16.25■□□□□ 0.19
DDX39B-220ENST00000482195 KIF15Q9NS87 1388 aa16.25■□□□□ 0.19
DDX39B-220ENST00000482195 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
DDX39B-220ENST00000482195 ERBINQ96RT1 1412 aa16.22■□□□□ 0.19
DDX39B-220ENST00000482195 XIRP1Q702N8 1843 aaKnown RBP16.22■□□□□ 0.19
DDX39B-220ENST00000482195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.21■□□□□ 0.191e-15■□□□□ 10.8
DDX39B-220ENST00000482195 RRP7BPQ9NSQ0 103 aa16.2■□□□□ 0.18
DDX39B-220ENST00000482195 SLIT1O75093 1534 aa16.19■□□□□ 0.18
DDX39B-220ENST00000482195 KANK1Q14678 1352 aa16.19■□□□□ 0.18
DDX39B-220ENST00000482195 APLP2Q06481 763 aa16.19■□□□□ 0.18
DDX39B-220ENST00000482195 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
DDX39B-220ENST00000482195 ABCC5O15440 1437 aa16.19■□□□□ 0.18
DDX39B-220ENST00000482195 DAPK1P53355 1430 aa16.19■□□□□ 0.18
DDX39B-220ENST00000482195 ARHGAP23Q9P227 1491 aa16.18■□□□□ 0.18
DDX39B-220ENST00000482195 TXNDC2Q86VQ3 553 aa16.18■□□□□ 0.18
DDX39B-220ENST00000482195 ARHGAP31Q2M1Z3 1444 aa16.18■□□□□ 0.18
DDX39B-220ENST00000482195 EID1Q9Y6B2 187 aa16.17■□□□□ 0.18
DDX39B-220ENST00000482195 LTKP29376 864 aa16.16■□□□□ 0.18
DDX39B-220ENST00000482195 EFCAB6Q5THR3 1501 aa16.15■□□□□ 0.18
DDX39B-220ENST00000482195 KDM5AP29375 1690 aaKnown RBP16.14■□□□□ 0.18
DDX39B-220ENST00000482195 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
DDX39B-220ENST00000482195 CHIC2Q9UKJ5 165 aa16.14■□□□□ 0.17
DDX39B-220ENST00000482195 TMEM2Q9UHN6 1383 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms