RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 NCOA1Q15788 1441 aa34.79■■■■□ 3.16
GPCPD1-206ENST00000481690 FAM135AQ9P2D6 1515 aa34.78■■■■□ 3.16
GPCPD1-206ENST00000481690 CEP170BQ9Y4F5 1589 aaPredicted RBP34.78■■■■□ 3.16
GPCPD1-206ENST00000481690 CROCC2H7BZ55 1655 aa34.76■■■■□ 3.16
GPCPD1-206ENST00000481690 CERKQ8TCT0 537 aa34.75■■■■□ 3.15
GPCPD1-206ENST00000481690 PTPRTO14522 1441 aa34.74■■■■□ 3.15
GPCPD1-206ENST00000481690 WASHC2CQ9Y4E1 1318 aa34.74■■■■□ 3.15
GPCPD1-206ENST00000481690 RNF17Q9BXT8 1623 aaKnown RBP34.73■■■■□ 3.15
GPCPD1-206ENST00000481690 EIF2AK4Q9P2K8 1649 aaKnown RBP34.73■■■■□ 3.15
GPCPD1-206ENST00000481690 PZPP20742 1482 aa34.69■■■■□ 3.14
GPCPD1-206ENST00000481690 FGD6Q6ZV73 1430 aa34.68■■■■□ 3.14
GPCPD1-206ENST00000481690 ZC3H13Q5T200 1668 aaKnown RBP34.66■■■■□ 3.14
GPCPD1-206ENST00000481690 DNMT1P26358 1616 aaKnown RBP34.66■■■■□ 3.14
GPCPD1-206ENST00000481690 DUOX2Q9NRD8 1548 aa34.65■■■■□ 3.14
GPCPD1-206ENST00000481690 SHANK2Q9UPX8 1470 aa34.65■■■■□ 3.14
GPCPD1-206ENST00000481690 FBXO31Q5XUX0 539 aaPredicted RBP34.65■■■■□ 3.14
GPCPD1-206ENST00000481690 A2ML1A8K2U0 1454 aa34.65■■■■□ 3.14
GPCPD1-206ENST00000481690 ABCC5O15440 1437 aa34.64■■■■□ 3.14
GPCPD1-206ENST00000481690 TNRQ92752 1358 aa34.64■■■■□ 3.14
GPCPD1-206ENST00000481690 NCKAP5LQ9HCH0 1330 aa34.63■■■■□ 3.13
GPCPD1-206ENST00000481690 PLA2R1Q13018 1463 aa34.63■■■■□ 3.13
GPCPD1-206ENST00000481690 TCOF1Q13428 1488 aaKnown RBP34.63■■■■□ 3.13
GPCPD1-206ENST00000481690 DAPK1P53355 1430 aa34.62■■■■□ 3.13
GPCPD1-206ENST00000481690 ABCC3O15438 1527 aa34.61■■■■□ 3.13
GPCPD1-206ENST00000481690 CEP152O94986 1710 aa34.61■■■■□ 3.13
GPCPD1-206ENST00000481690 MROH1Q8NDA8 1641 aa34.6■■■■□ 3.13
GPCPD1-206ENST00000481690 KIF15Q9NS87 1388 aa34.6■■■■□ 3.13
GPCPD1-206ENST00000481690 RRP7BPQ9NSQ0 103 aa34.55■■■■□ 3.12
GPCPD1-206ENST00000481690 PKD2Q13563 968 aa34.54■■■■□ 3.12
GPCPD1-206ENST00000481690 POLR1AO95602 1720 aaPredicted RBP34.52■■■■□ 3.12
GPCPD1-206ENST00000481690 CFAP65Q6ZU64 1925 aaKnown RBP34.52■■■■□ 3.12
GPCPD1-206ENST00000481690 ERBINQ96RT1 1412 aa34.52■■■■□ 3.12
GPCPD1-206ENST00000481690 LTBP4Q8N2S1 1624 aa34.52■■■■□ 3.12
GPCPD1-206ENST00000481690 NLRP1Q9C000 1473 aa34.48■■■■□ 3.11
GPCPD1-206ENST00000481690 CHIC2Q9UKJ5 165 aa34.48■■■■□ 3.11
GPCPD1-206ENST00000481690 PRDM15P57071 1507 aaPredicted RBP34.48■■■■□ 3.11
GPCPD1-206ENST00000481690 SPATA31D1Q6ZQQ2 1576 aa34.46■■■■□ 3.11
GPCPD1-206ENST00000481690 ANKRD30AQ9BXX3 1397 aa34.45■■■■□ 3.11
GPCPD1-206ENST00000481690 UGGT1Q9NYU2 1555 aa34.45■■■■□ 3.1
GPCPD1-206ENST00000481690 FAM50AQ14320 339 aaKnown RBP34.44■■■■□ 3.1
GPCPD1-206ENST00000481690 ERVK-7P63135 1459 aa34.44■■■■□ 3.1
GPCPD1-206ENST00000481690 DEPDC5O75140 1603 aa34.43■■■■□ 3.1
GPCPD1-206ENST00000481690 ZNF335Q9H4Z2 1342 aaPredicted RBP34.41■■■■□ 3.1
GPCPD1-206ENST00000481690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.4■■■■□ 3.18e-7■■■■□ 21.6
GPCPD1-206ENST00000481690 NEURL4Q96JN8 1562 aa34.4■■■■□ 3.1
GPCPD1-206ENST00000481690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.39■■■■□ 3.1
GPCPD1-206ENST00000481690 THEMISQ8N1K5 641 aaPredicted RBP34.37■■■■□ 3.09
GPCPD1-206ENST00000481690 KANK1Q14678 1352 aa34.35■■■■□ 3.09
GPCPD1-206ENST00000481690 ADGRL2O95490 1459 aa34.34■■■■□ 3.09
GPCPD1-206ENST00000481690 IQSEC2Q5JU85 1478 aa34.34■■■■□ 3.09
GPCPD1-206ENST00000481690 ANKLE2Q86XL3 938 aa34.32■■■■□ 3.08
GPCPD1-206ENST00000481690 ARHGAP31Q2M1Z3 1444 aa34.3■■■■□ 3.08
GPCPD1-206ENST00000481690 UBR1Q8IWV7 1749 aa34.29■■■■□ 3.08
GPCPD1-206ENST00000481690 VWDEQ8N2E2 1590 aa34.25■■■■□ 3.07
GPCPD1-206ENST00000481690 IQGAP1P46940 1657 aa34.24■■■■□ 3.07
GPCPD1-206ENST00000481690 NPHP4O75161 1426 aaPredicted RBP34.23■■■■□ 3.07
GPCPD1-206ENST00000481690 LMTK2Q8IWU2 1503 aa34.23■■■■□ 3.07
GPCPD1-206ENST00000481690 MED14O60244 1454 aa34.2■■■■□ 3.07
GPCPD1-206ENST00000481690 PPARGC1BQ86YN6 1023 aaKnown RBP34.2■■■■□ 3.07
GPCPD1-206ENST00000481690 ANKRD50Q9ULJ7 1429 aa34.2■■■■□ 3.06
GPCPD1-206ENST00000481690 PIK3C2BO00750 1634 aa34.19■■■■□ 3.06
GPCPD1-206ENST00000481690 EFCAB6Q5THR3 1501 aa34.18■■■■□ 3.06
GPCPD1-206ENST00000481690 CPS1P31327 1500 aa34.14■■■■□ 3.06
GPCPD1-206ENST00000481690 UBAP1LF5GYI3 381 aa34.11■■■■□ 3.05
GPCPD1-206ENST00000481690 SYNMO15061 1565 aa34.11■■■■□ 3.05
GPCPD1-206ENST00000481690 SCAF11Q99590 1463 aaKnown RBP34.1■■■■□ 3.05
GPCPD1-206ENST00000481690 STAG3Q9UJ98 1225 aa34.09■■■■□ 3.05
GPCPD1-206ENST00000481690 SLIT1O75093 1534 aa34.09■■■■□ 3.05
GPCPD1-206ENST00000481690 ARHGAP23Q9P227 1491 aa34.07■■■■□ 3.05
GPCPD1-206ENST00000481690 TET3O43151 1660 aa34.07■■■■□ 3.04
GPCPD1-206ENST00000481690 ITGAEP38570 1179 aa34.07■■■■□ 3.04
GPCPD1-206ENST00000481690 UNC13BO14795 1591 aa34.06■■■■□ 3.04
GPCPD1-206ENST00000481690 KDM5AP29375 1690 aaKnown RBP34.06■■■■□ 3.04
GPCPD1-206ENST00000481690 ROCK1Q13464 1354 aa34.05■■■■□ 3.04
GPCPD1-206ENST00000481690 GCC2Q8IWJ2 1684 aa34.04■■■■□ 3.04
GPCPD1-206ENST00000481690 NOS1P29475 1434 aa34.04■■■■□ 3.04
GPCPD1-206ENST00000481690 STRCP1A6NGW2 1772 aa34.03■■■■□ 3.04
GPCPD1-206ENST00000481690 TXNDC2Q86VQ3 553 aa34.03■■■■□ 3.04
GPCPD1-206ENST00000481690 LTKP29376 864 aa34.01■■■■□ 3.03
GPCPD1-206ENST00000481690 IDI1Q13907 227 aa34.01■■■■□ 3.03
GPCPD1-206ENST00000481690 EID1Q9Y6B2 187 aa34.01■■■■□ 3.03
GPCPD1-206ENST00000481690 RPRD2Q5VT52 1461 aaKnown RBP34.01■■■■□ 3.03
GPCPD1-206ENST00000481690 ADGRB3O60242 1522 aa33.99■■■■□ 3.03
GPCPD1-206ENST00000481690 TMEM2Q9UHN6 1383 aa33.98■■■■□ 3.03
GPCPD1-206ENST00000481690 IQGAP3Q86VI3 1631 aa33.93■■■■□ 3.02
GPCPD1-206ENST00000481690 MYO5BQ9ULV0 1848 aa33.93■■■■□ 3.02
GPCPD1-206ENST00000481690 SCAF1Q9H7N4 1312 aaKnown RBP33.93■■■■□ 3.02
GPCPD1-206ENST00000481690 E9PCH4 1651 aa33.93■■■■□ 3.02
GPCPD1-206ENST00000481690 SLC52A1Q9NWF4 448 aa33.91■■■■□ 3.02
GPCPD1-206ENST00000481690 TOM1O60784 492 aa33.89■■■■□ 3.02
GPCPD1-206ENST00000481690 LRRC7Q96NW7 1537 aa33.89■■■■□ 3.02
GPCPD1-206ENST00000481690 PIP4K2BP78356 416 aa33.88■■■■□ 3.01
GPCPD1-206ENST00000481690 DISP3Q9P2K9 1392 aa33.85■■■■□ 3.01
GPCPD1-206ENST00000481690 NUP155O75694 1391 aa33.84■■■■□ 3.01
GPCPD1-206ENST00000481690 RRBP1Q9P2E9 1410 aaKnown RBP33.83■■■■□ 3.01
GPCPD1-206ENST00000481690 TMEM131LA2VDJ0 1609 aa33.81■■■■□ 3
GPCPD1-206ENST00000481690 ALKQ9UM73 1620 aa33.79■■■■□ 3
GPCPD1-206ENST00000481690 XIRP1Q702N8 1843 aaKnown RBP33.78■■■■□ 3
GPCPD1-206ENST00000481690 CHGAP10645 457 aaKnown RBP33.76■■■□□ 2.99
GPCPD1-206ENST00000481690 BCANQ96GW7 911 aa33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms