RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 FBXO31Q5XUX0 539 aaPredicted RBP29.75■■■□□ 2.35
ABCF3-214ENST00000480562 WASHC2CQ9Y4E1 1318 aa29.73■■■□□ 2.35
ABCF3-214ENST00000480562 KDM5DQ9BY66 1539 aa29.72■■■□□ 2.35
ABCF3-214ENST00000480562 PLA2R1Q13018 1463 aa29.72■■■□□ 2.35
ABCF3-214ENST00000480562 MYOM3Q5VTT5 1437 aa29.71■■■□□ 2.35
ABCF3-214ENST00000480562 A2ML1A8K2U0 1454 aa29.7■■■□□ 2.35
ABCF3-214ENST00000480562 PKD2Q13563 968 aa29.7■■■□□ 2.35
ABCF3-214ENST00000480562 PZPP20742 1482 aa29.68■■■□□ 2.34
ABCF3-214ENST00000480562 TCOF1Q13428 1488 aaKnown RBP29.68■■■□□ 2.34
ABCF3-214ENST00000480562 TNRQ92752 1358 aa29.68■■■□□ 2.34
ABCF3-214ENST00000480562 FAM135AQ9P2D6 1515 aa29.68■■■□□ 2.34
ABCF3-214ENST00000480562 MIA2Q96PC5 1412 aa29.68■■■□□ 2.34
ABCF3-214ENST00000480562 MAST1Q9Y2H9 1570 aa29.68■■■□□ 2.34
ABCF3-214ENST00000480562 DNMT1P26358 1616 aaKnown RBP29.66■■■□□ 2.34
ABCF3-214ENST00000480562 ZNF335Q9H4Z2 1342 aaPredicted RBP29.65■■■□□ 2.34
ABCF3-214ENST00000480562 APLP2Q06481 763 aa29.62■■■□□ 2.33
ABCF3-214ENST00000480562 RNF17Q9BXT8 1623 aaKnown RBP29.6■■■□□ 2.33
ABCF3-214ENST00000480562 IQSEC2Q5JU85 1478 aa29.58■■■□□ 2.33
ABCF3-214ENST00000480562 ABCC3O15438 1527 aa29.55■■■□□ 2.32
ABCF3-214ENST00000480562 EIF2AK4Q9P2K8 1649 aaKnown RBP29.54■■■□□ 2.32
ABCF3-214ENST00000480562 ABCC5O15440 1437 aa29.52■■■□□ 2.32
ABCF3-214ENST00000480562 PTPN23Q9H3S7 1636 aa29.52■■■□□ 2.32
ABCF3-214ENST00000480562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.52■■■□□ 2.32
ABCF3-214ENST00000480562 DUOX2Q9NRD8 1548 aa29.51■■■□□ 2.32
ABCF3-214ENST00000480562 NLRP1Q9C000 1473 aa29.51■■■□□ 2.31
ABCF3-214ENST00000480562 MROH1Q8NDA8 1641 aa29.51■■■□□ 2.31
ABCF3-214ENST00000480562 NEURL4Q96JN8 1562 aa29.5■■■□□ 2.31
ABCF3-214ENST00000480562 ZC3H13Q5T200 1668 aaKnown RBP29.5■■■□□ 2.31
ABCF3-214ENST00000480562 POLR1AO95602 1720 aaPredicted RBP29.49■■■□□ 2.31
ABCF3-214ENST00000480562 THEMISQ8N1K5 641 aaPredicted RBP29.49■■■□□ 2.31
ABCF3-214ENST00000480562 RRP7BPQ9NSQ0 103 aa29.49■■■□□ 2.31
ABCF3-214ENST00000480562 KIF15Q9NS87 1388 aa29.49■■■□□ 2.31
ABCF3-214ENST00000480562 ANKLE2Q86XL3 938 aa29.48■■■□□ 2.31
ABCF3-214ENST00000480562 UGGT1Q9NYU2 1555 aa29.47■■■□□ 2.31
ABCF3-214ENST00000480562 SHANK2Q9UPX8 1470 aa29.47■■■□□ 2.31
ABCF3-214ENST00000480562 CROCC2H7BZ55 1655 aa29.47■■■□□ 2.31
ABCF3-214ENST00000480562 FGD6Q6ZV73 1430 aa29.45■■■□□ 2.31
ABCF3-214ENST00000480562 CEP152O94986 1710 aa29.45■■■□□ 2.31
ABCF3-214ENST00000480562 SPATA31D1Q6ZQQ2 1576 aa29.45■■■□□ 2.31
ABCF3-214ENST00000480562 ERVK-7P63135 1459 aa29.45■■■□□ 2.31
ABCF3-214ENST00000480562 DAPK1P53355 1430 aa29.45■■■□□ 2.3
ABCF3-214ENST00000480562 UBAP1LF5GYI3 381 aa29.44■■■□□ 2.3
ABCF3-214ENST00000480562 ERBINQ96RT1 1412 aa29.4■■■□□ 2.3
ABCF3-214ENST00000480562 CHIC2Q9UKJ5 165 aa29.4■■■□□ 2.3
ABCF3-214ENST00000480562 CFAP65Q6ZU64 1925 aaKnown RBP29.39■■■□□ 2.3
ABCF3-214ENST00000480562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.39■■■□□ 2.3
ABCF3-214ENST00000480562 DISP3Q9P2K9 1392 aa29.38■■■□□ 2.29
ABCF3-214ENST00000480562 NPHP4O75161 1426 aaPredicted RBP29.37■■■□□ 2.29
ABCF3-214ENST00000480562 PRDM15P57071 1507 aaPredicted RBP29.36■■■□□ 2.29
ABCF3-214ENST00000480562 MED14O60244 1454 aa29.35■■■□□ 2.29
ABCF3-214ENST00000480562 DEPDC5O75140 1603 aa29.34■■■□□ 2.29
ABCF3-214ENST00000480562 VWDEQ8N2E2 1590 aa29.32■■■□□ 2.28
ABCF3-214ENST00000480562 CPS1P31327 1500 aa29.32■■■□□ 2.28
ABCF3-214ENST00000480562 ANKRD30AQ9BXX3 1397 aa29.32■■■□□ 2.28
ABCF3-214ENST00000480562 ARHGAP31Q2M1Z3 1444 aa29.31■■■□□ 2.28
ABCF3-214ENST00000480562 IQGAP1P46940 1657 aa29.29■■■□□ 2.28
ABCF3-214ENST00000480562 UBR1Q8IWV7 1749 aa29.28■■■□□ 2.28
ABCF3-214ENST00000480562 KANK1Q14678 1352 aa29.28■■■□□ 2.28
ABCF3-214ENST00000480562 FAM50AQ14320 339 aaKnown RBP29.28■■■□□ 2.28
ABCF3-214ENST00000480562 SCAF1Q9H7N4 1312 aaKnown RBP29.24■■■□□ 2.27
ABCF3-214ENST00000480562 ILDR2Q71H61 639 aa29.24■■■□□ 2.27
ABCF3-214ENST00000480562 PIP4K2BP78356 416 aa29.23■■■□□ 2.27
ABCF3-214ENST00000480562 LTKP29376 864 aa29.21■■■□□ 2.27
ABCF3-214ENST00000480562 SCAF11Q99590 1463 aaKnown RBP29.21■■■□□ 2.27
ABCF3-214ENST00000480562 TOM1O60784 492 aa29.2■■■□□ 2.26
ABCF3-214ENST00000480562 TXNDC2Q86VQ3 553 aa29.2■■■□□ 2.26
ABCF3-214ENST00000480562 ADGRL2O95490 1459 aa29.2■■■□□ 2.26
ABCF3-214ENST00000480562 LMTK2Q8IWU2 1503 aa29.19■■■□□ 2.26
ABCF3-214ENST00000480562 ARHGAP23Q9P227 1491 aa29.18■■■□□ 2.26
ABCF3-214ENST00000480562 PIK3C2BO00750 1634 aa29.18■■■□□ 2.26
ABCF3-214ENST00000480562 STRCP1A6NGW2 1772 aa29.17■■■□□ 2.26
ABCF3-214ENST00000480562 SLIT1O75093 1534 aa29.17■■■□□ 2.26
ABCF3-214ENST00000480562 STAG3Q9UJ98 1225 aa29.15■■■□□ 2.26
ABCF3-214ENST00000480562 HSPA1LP34931 641 aa29.14■■■□□ 2.26
ABCF3-214ENST00000480562 IDI1Q13907 227 aa29.13■■■□□ 2.25
ABCF3-214ENST00000480562 EID1Q9Y6B2 187 aa29.13■■■□□ 2.25
ABCF3-214ENST00000480562 LRRC7Q96NW7 1537 aa29.12■■■□□ 2.25
ABCF3-214ENST00000480562 ANKRD50Q9ULJ7 1429 aa29.11■■■□□ 2.25
ABCF3-214ENST00000480562 TMEM2Q9UHN6 1383 aa29.11■■■□□ 2.25
ABCF3-214ENST00000480562 EFCAB6Q5THR3 1501 aa29.1■■■□□ 2.25
ABCF3-214ENST00000480562 SYNMO15061 1565 aa29.1■■■□□ 2.25
ABCF3-214ENST00000480562 ALKQ9UM73 1620 aa29.09■■■□□ 2.25
ABCF3-214ENST00000480562 NOS1P29475 1434 aa29.08■■■□□ 2.25
ABCF3-214ENST00000480562 KDM5AP29375 1690 aaKnown RBP29.02■■■□□ 2.24
ABCF3-214ENST00000480562 PPARGC1BQ86YN6 1023 aaKnown RBP29■■■□□ 2.23
ABCF3-214ENST00000480562 SLC52A1Q9NWF4 448 aa29■■■□□ 2.23
ABCF3-214ENST00000480562 ADGRB3O60242 1522 aa28.99■■■□□ 2.23
ABCF3-214ENST00000480562 SOCS7O14512 581 aa28.99■■■□□ 2.23
ABCF3-214ENST00000480562 SENP3Q9H4L4 574 aaPredicted RBP28.99■■■□□ 2.23
ABCF3-214ENST00000480562 RPRD2Q5VT52 1461 aaKnown RBP28.97■■■□□ 2.23
ABCF3-214ENST00000480562 SLC26A8Q96RN1 970 aa28.96■■■□□ 2.23
ABCF3-214ENST00000480562 TET3O43151 1660 aa28.96■■■□□ 2.23
ABCF3-214ENST00000480562 ITGAEP38570 1179 aa28.95■■■□□ 2.22
ABCF3-214ENST00000480562 UNC13BO14795 1591 aa28.94■■■□□ 2.22
ABCF3-214ENST00000480562 ROCK1Q13464 1354 aa28.93■■■□□ 2.22
ABCF3-214ENST00000480562 XIRP1Q702N8 1843 aaKnown RBP28.92■■■□□ 2.22
ABCF3-214ENST00000480562 MED1Q15648 1581 aaPredicted RBP28.91■■■□□ 2.22
ABCF3-214ENST00000480562 BCANQ96GW7 911 aa28.9■■■□□ 2.22
ABCF3-214ENST00000480562 GCC2Q8IWJ2 1684 aa28.89■■■□□ 2.22
ABCF3-214ENST00000480562 KCNA6P17658 529 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms