RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-222ENST00000479596 CROCC2H7BZ55 1655 aa23.53■■□□□ 1.36
CCNL1-222ENST00000479596 SHANK2Q9UPX8 1470 aa23.52■■□□□ 1.36
CCNL1-222ENST00000479596 RNF17Q9BXT8 1623 aaKnown RBP23.51■■□□□ 1.35
CCNL1-222ENST00000479596 DNMT1P26358 1616 aaKnown RBP23.5■■□□□ 1.35
CCNL1-222ENST00000479596 ZNF142P52746 1687 aaPredicted RBP23.5■■□□□ 1.35
CCNL1-222ENST00000479596 EIF2AK4Q9P2K8 1649 aaKnown RBP23.49■■□□□ 1.35
CCNL1-222ENST00000479596 DAPK1P53355 1430 aa23.49■■□□□ 1.35
CCNL1-222ENST00000479596 NCOA1Q15788 1441 aa23.49■■□□□ 1.35
CCNL1-222ENST00000479596 MROH1Q8NDA8 1641 aa23.48■■□□□ 1.35
CCNL1-222ENST00000479596 PZPP20742 1482 aa23.47■■□□□ 1.35
CCNL1-222ENST00000479596 DUOX2Q9NRD8 1548 aa23.47■■□□□ 1.35
CCNL1-222ENST00000479596 CEP170BQ9Y4F5 1589 aaPredicted RBP23.47■■□□□ 1.35
CCNL1-222ENST00000479596 CAMSAP1Q5T5Y3 1602 aa23.45■■□□□ 1.34
CCNL1-222ENST00000479596 WASHC2CQ9Y4E1 1318 aa23.45■■□□□ 1.34
CCNL1-222ENST00000479596 ABCC3O15438 1527 aa23.44■■□□□ 1.34
CCNL1-222ENST00000479596 KIF15Q9NS87 1388 aa23.44■■□□□ 1.34
CCNL1-222ENST00000479596 FBXO31Q5XUX0 539 aaPredicted RBP23.43■■□□□ 1.34
CCNL1-222ENST00000479596 PTPRTO14522 1441 aa23.42■■□□□ 1.34
CCNL1-222ENST00000479596 DMRT2Q9Y5R5 561 aa23.42■■□□□ 1.34
CCNL1-222ENST00000479596 ZC3H13Q5T200 1668 aaKnown RBP23.41■■□□□ 1.34
CCNL1-222ENST00000479596 FBXO41Q8TF61 875 aa23.4■■□□□ 1.34
CCNL1-222ENST00000479596 A2ML1A8K2U0 1454 aa23.4■■□□□ 1.34
CCNL1-222ENST00000479596 ERBINQ96RT1 1412 aa23.4■■□□□ 1.34
CCNL1-222ENST00000479596 TNRQ92752 1358 aa23.39■■□□□ 1.33
CCNL1-222ENST00000479596 PLA2R1Q13018 1463 aa23.38■■□□□ 1.33
CCNL1-222ENST00000479596 RRP7BPQ9NSQ0 103 aa23.38■■□□□ 1.33
CCNL1-222ENST00000479596 PRDM15P57071 1507 aaPredicted RBP23.37■■□□□ 1.33
CCNL1-222ENST00000479596 CEP152O94986 1710 aa23.35■■□□□ 1.33
CCNL1-222ENST00000479596 DEPDC5O75140 1603 aa23.34■■□□□ 1.33
CCNL1-222ENST00000479596 CERKQ8TCT0 537 aa23.34■■□□□ 1.33
CCNL1-222ENST00000479596 CHIC2Q9UKJ5 165 aa23.34■■□□□ 1.33
CCNL1-222ENST00000479596 ADGRL2O95490 1459 aa23.34■■□□□ 1.33
CCNL1-222ENST00000479596 NCKAP5LQ9HCH0 1330 aa23.33■■□□□ 1.33
CCNL1-222ENST00000479596 SPATA31D1Q6ZQQ2 1576 aa23.33■■□□□ 1.33
CCNL1-222ENST00000479596 ANKRD30AQ9BXX3 1397 aa23.33■■□□□ 1.33
CCNL1-222ENST00000479596 ERVK-7P63135 1459 aa23.3■■□□□ 1.32
CCNL1-222ENST00000479596 FAM50AQ14320 339 aaKnown RBP23.3■■□□□ 1.32
CCNL1-222ENST00000479596 NLRP1Q9C000 1473 aa23.3■■□□□ 1.32
CCNL1-222ENST00000479596 LTBP4Q8N2S1 1624 aa23.3■■□□□ 1.32
CCNL1-222ENST00000479596 PKD2Q13563 968 aa23.29■■□□□ 1.32
CCNL1-222ENST00000479596 VWDEQ8N2E2 1590 aa23.27■■□□□ 1.32
CCNL1-222ENST00000479596 ARHGAP31Q2M1Z3 1444 aa23.25■■□□□ 1.31
CCNL1-222ENST00000479596 NEURL4Q96JN8 1562 aa23.25■■□□□ 1.31
CCNL1-222ENST00000479596 UGGT1Q9NYU2 1555 aa23.24■■□□□ 1.31
CCNL1-222ENST00000479596 LMTK2Q8IWU2 1503 aa23.23■■□□□ 1.31
CCNL1-222ENST00000479596 PPARGC1BQ86YN6 1023 aaKnown RBP23.22■■□□□ 1.31
CCNL1-222ENST00000479596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.22■■□□□ 1.319e-9■■□□□ 14.4
CCNL1-222ENST00000479596 POLR1AO95602 1720 aaPredicted RBP23.22■■□□□ 1.31
CCNL1-222ENST00000479596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.21■■□□□ 1.312e-9■□□□□ 10.1
CCNL1-222ENST00000479596 KANK1Q14678 1352 aa23.19■■□□□ 1.3
CCNL1-222ENST00000479596 ZNF335Q9H4Z2 1342 aaPredicted RBP23.19■■□□□ 1.3
CCNL1-222ENST00000479596 ANKRD50Q9ULJ7 1429 aa23.18■■□□□ 1.3
CCNL1-222ENST00000479596 THEMISQ8N1K5 641 aaPredicted RBP23.17■■□□□ 1.3
CCNL1-222ENST00000479596 UBR1Q8IWV7 1749 aa23.16■■□□□ 1.3
CCNL1-222ENST00000479596 CFAP65Q6ZU64 1925 aaKnown RBP23.16■■□□□ 1.3
CCNL1-222ENST00000479596 EFCAB6Q5THR3 1501 aa23.15■■□□□ 1.3
CCNL1-222ENST00000479596 ROCK1Q13464 1354 aa23.14■■□□□ 1.3
CCNL1-222ENST00000479596 MED14O60244 1454 aa23.13■■□□□ 1.29
CCNL1-222ENST00000479596 IQSEC2Q5JU85 1478 aa23.13■■□□□ 1.29
CCNL1-222ENST00000479596 ANKLE2Q86XL3 938 aa23.12■■□□□ 1.29
CCNL1-222ENST00000479596 UNC13BO14795 1591 aa23.1■■□□□ 1.29
CCNL1-222ENST00000479596 SYNMO15061 1565 aa23.1■■□□□ 1.29
CCNL1-222ENST00000479596 NPHP4O75161 1426 aaPredicted RBP23.1■■□□□ 1.29
CCNL1-222ENST00000479596 NOS1P29475 1434 aa23.09■■□□□ 1.29
CCNL1-222ENST00000479596 PIK3C2BO00750 1634 aa23.09■■□□□ 1.29
CCNL1-222ENST00000479596 ARHGAP23Q9P227 1491 aa23.08■■□□□ 1.29
CCNL1-222ENST00000479596 SLIT1O75093 1534 aa23.07■■□□□ 1.28
CCNL1-222ENST00000479596 RRBP1Q9P2E9 1410 aaKnown RBP23.07■■□□□ 1.28
CCNL1-222ENST00000479596 IQGAP1P46940 1657 aa23.06■■□□□ 1.28
CCNL1-222ENST00000479596 TET3O43151 1660 aa23.06■■□□□ 1.28
CCNL1-222ENST00000479596 ITGAEP38570 1179 aa23.05■■□□□ 1.28
CCNL1-222ENST00000479596 RPRD2Q5VT52 1461 aaKnown RBP23.04■■□□□ 1.28
CCNL1-222ENST00000479596 SCAF11Q99590 1463 aaKnown RBP23.04■■□□□ 1.28
CCNL1-222ENST00000479596 KDM5AP29375 1690 aaKnown RBP23.03■■□□□ 1.28
CCNL1-222ENST00000479596 IDI1Q13907 227 aa23.02■■□□□ 1.28
CCNL1-222ENST00000479596 LTKP29376 864 aa23.01■■□□□ 1.27
CCNL1-222ENST00000479596 GCC2Q8IWJ2 1684 aa23■■□□□ 1.27
CCNL1-222ENST00000479596 CPS1P31327 1500 aa23■■□□□ 1.27
CCNL1-222ENST00000479596 IQGAP3Q86VI3 1631 aa23■■□□□ 1.27
CCNL1-222ENST00000479596 TMEM2Q9UHN6 1383 aa23■■□□□ 1.27
CCNL1-222ENST00000479596 ADGRB3O60242 1522 aa22.98■■□□□ 1.27
CCNL1-222ENST00000479596 E9PCH4 1651 aa22.97■■□□□ 1.27
CCNL1-222ENST00000479596 TXNDC2Q86VQ3 553 aa22.96■■□□□ 1.27
CCNL1-222ENST00000479596 STRCP1A6NGW2 1772 aa22.96■■□□□ 1.27
CCNL1-222ENST00000479596 SLC52A1Q9NWF4 448 aa22.94■■□□□ 1.26
CCNL1-222ENST00000479596 NUP155O75694 1391 aa22.93■■□□□ 1.26
CCNL1-222ENST00000479596 STAG3Q9UJ98 1225 aa22.93■■□□□ 1.26
CCNL1-222ENST00000479596 UBAP1LF5GYI3 381 aa22.9■■□□□ 1.26
CCNL1-222ENST00000479596 EID1Q9Y6B2 187 aa22.9■■□□□ 1.26
CCNL1-222ENST00000479596 NAIPQ13075 1403 aa22.89■■□□□ 1.25
CCNL1-222ENST00000479596 TMEM131LA2VDJ0 1609 aa22.89■■□□□ 1.25
CCNL1-222ENST00000479596 LRRC7Q96NW7 1537 aa22.87■■□□□ 1.25
CCNL1-222ENST00000479596 ZFYVE9O95405 1425 aa22.87■■□□□ 1.25
CCNL1-222ENST00000479596 MYO5BQ9ULV0 1848 aa22.87■■□□□ 1.25
CCNL1-222ENST00000479596 ALKQ9UM73 1620 aa22.86■■□□□ 1.25
CCNL1-222ENST00000479596 HFM1A2PYH4 1435 aa22.82■■□□□ 1.24
CCNL1-222ENST00000479596 RIMS2Q9UQ26 1411 aa22.81■■□□□ 1.24
CCNL1-222ENST00000479596 SLC26A8Q96RN1 970 aa22.78■■□□□ 1.24
CCNL1-222ENST00000479596 PLEKHG1Q9ULL1 1385 aa22.77■■□□□ 1.24
CCNL1-222ENST00000479596 SPHKAPQ2M3C7 1700 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms