RNA–Protein interactions for RNA: ENST00000478997.3

RN7SL549P-201, Transcript of RNA, 7SL, cytoplasmic 549, pseudogene, humanhuman

BASIC

Gene RN7SL549P, Length 282 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL549P-201ENST00000478997 DAPK1P53355 1430 aa11.92□□□□□ -0.5
RN7SL549P-201ENST00000478997 PTPRKQ15262 1439 aa11.92□□□□□ -0.5
RN7SL549P-201ENST00000478997 HSPA2P54652 639 aa11.91□□□□□ -0.5
RN7SL549P-201ENST00000478997 ZNF142P52746 1687 aaPredicted RBP11.91□□□□□ -0.5
RN7SL549P-201ENST00000478997 ZC3H13Q5T200 1668 aaKnown RBP11.91□□□□□ -0.5
RN7SL549P-201ENST00000478997 KIF3BO15066 747 aa11.9□□□□□ -0.5
RN7SL549P-201ENST00000478997 MROH1Q8NDA8 1641 aa11.89□□□□□ -0.51
RN7SL549P-201ENST00000478997 MYO3AQ8NEV4 1616 aa11.89□□□□□ -0.51
RN7SL549P-201ENST00000478997 ERBINQ96RT1 1412 aa11.89□□□□□ -0.51
RN7SL549P-201ENST00000478997 PZPP20742 1482 aa11.89□□□□□ -0.51
RN7SL549P-201ENST00000478997 STRCQ7RTU9 1775 aa11.88□□□□□ -0.51
RN7SL549P-201ENST00000478997 KIF15Q9NS87 1388 aa11.88□□□□□ -0.51
RN7SL549P-201ENST00000478997 ABCC3O15438 1527 aa11.87□□□□□ -0.51
RN7SL549P-201ENST00000478997 PRDM15P57071 1507 aaPredicted RBP11.87□□□□□ -0.51
RN7SL549P-201ENST00000478997 ADGRL2O95490 1459 aa11.87□□□□□ -0.51
RN7SL549P-201ENST00000478997 CEP170BQ9Y4F5 1589 aaPredicted RBP11.87□□□□□ -0.51
RN7SL549P-201ENST00000478997 DEPDC5O75140 1603 aa11.86□□□□□ -0.51
RN7SL549P-201ENST00000478997 NCOA1Q15788 1441 aa11.86□□□□□ -0.51
RN7SL549P-201ENST00000478997 PLA2R1Q13018 1463 aa11.85□□□□□ -0.51
RN7SL549P-201ENST00000478997 ANKRD30AQ9BXX3 1397 aa11.85□□□□□ -0.51
RN7SL549P-201ENST00000478997 WASHC2CQ9Y4E1 1318 aa11.85□□□□□ -0.51
RN7SL549P-201ENST00000478997 PTPRTO14522 1441 aa11.84□□□□□ -0.51
RN7SL549P-201ENST00000478997 A2ML1A8K2U0 1454 aa11.83□□□□□ -0.52
RN7SL549P-201ENST00000478997 CAMSAP1Q5T5Y3 1602 aa11.83□□□□□ -0.52
RN7SL549P-201ENST00000478997 DMRT2Q9Y5R5 561 aa11.83□□□□□ -0.52
RN7SL549P-201ENST00000478997 SPATA31D1Q6ZQQ2 1576 aa11.83□□□□□ -0.52
RN7SL549P-201ENST00000478997 TNRQ92752 1358 aa11.82□□□□□ -0.52
RN7SL549P-201ENST00000478997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.82□□□□□ -0.52
RN7SL549P-201ENST00000478997 ARHGAP31Q2M1Z3 1444 aa11.82□□□□□ -0.52
RN7SL549P-201ENST00000478997 CEP152O94986 1710 aa11.82□□□□□ -0.52
RN7SL549P-201ENST00000478997 NLRP1Q9C000 1473 aa11.82□□□□□ -0.52
RN7SL549P-201ENST00000478997 VWDEQ8N2E2 1590 aa11.81□□□□□ -0.52
RN7SL549P-201ENST00000478997 RRP7BPQ9NSQ0 103 aa11.81□□□□□ -0.52
RN7SL549P-201ENST00000478997 LMTK2Q8IWU2 1503 aa11.81□□□□□ -0.52
RN7SL549P-201ENST00000478997 ERVK-7P63135 1459 aa11.8□□□□□ -0.52
RN7SL549P-201ENST00000478997 FAM50AQ14320 339 aaKnown RBP11.79□□□□□ -0.52
RN7SL549P-201ENST00000478997 FBXO31Q5XUX0 539 aaPredicted RBP11.79□□□□□ -0.52
RN7SL549P-201ENST00000478997 ROCK1Q13464 1354 aa11.79□□□□□ -0.52
RN7SL549P-201ENST00000478997 PKD2Q13563 968 aa11.77□□□□□ -0.53
RN7SL549P-201ENST00000478997 ILDR1Q86SU0 546 aaPredicted RBP11.77□□□□□ -0.53
RN7SL549P-201ENST00000478997 CHIC2Q9UKJ5 165 aa11.77□□□□□ -0.53
RN7SL549P-201ENST00000478997 KANK1Q14678 1352 aa11.77□□□□□ -0.53
RN7SL549P-201ENST00000478997 ANKRD50Q9ULJ7 1429 aa11.77□□□□□ -0.53
RN7SL549P-201ENST00000478997 UGGT1Q9NYU2 1555 aa11.75□□□□□ -0.53
RN7SL549P-201ENST00000478997 POLR1AO95602 1720 aaPredicted RBP11.75□□□□□ -0.53
RN7SL549P-201ENST00000478997 FBXO41Q8TF61 875 aa11.75□□□□□ -0.53
RN7SL549P-201ENST00000478997 RRBP1Q9P2E9 1410 aaKnown RBP11.75□□□□□ -0.53
RN7SL549P-201ENST00000478997 EFCAB6Q5THR3 1501 aa11.75□□□□□ -0.53
RN7SL549P-201ENST00000478997 UNC13BO14795 1591 aa11.75□□□□□ -0.53
RN7SL549P-201ENST00000478997 NEURL4Q96JN8 1562 aa11.74□□□□□ -0.53
RN7SL549P-201ENST00000478997 LTBP4Q8N2S1 1624 aa11.74□□□□□ -0.53
RN7SL549P-201ENST00000478997 CERKQ8TCT0 537 aa11.73□□□□□ -0.53
RN7SL549P-201ENST00000478997 UBR1Q8IWV7 1749 aa11.72□□□□□ -0.53
RN7SL549P-201ENST00000478997 MED14O60244 1454 aa11.72□□□□□ -0.53
RN7SL549P-201ENST00000478997 IQSEC2Q5JU85 1478 aa11.72□□□□□ -0.53
RN7SL549P-201ENST00000478997 RPRD2Q5VT52 1461 aaKnown RBP11.72□□□□□ -0.53
RN7SL549P-201ENST00000478997 NCKAP5LQ9HCH0 1330 aa11.72□□□□□ -0.53
RN7SL549P-201ENST00000478997 THEMISQ8N1K5 641 aaPredicted RBP11.72□□□□□ -0.53
RN7SL549P-201ENST00000478997 TET3O43151 1660 aa11.71□□□□□ -0.53
RN7SL549P-201ENST00000478997 KDM5AP29375 1690 aaKnown RBP11.71□□□□□ -0.53
RN7SL549P-201ENST00000478997 NOS1P29475 1434 aa11.71□□□□□ -0.53
RN7SL549P-201ENST00000478997 CFAP65Q6ZU64 1925 aaKnown RBP11.71□□□□□ -0.53
RN7SL549P-201ENST00000478997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.7□□□□□ -0.54
RN7SL549P-201ENST00000478997 GCC2Q8IWJ2 1684 aa11.7□□□□□ -0.54
RN7SL549P-201ENST00000478997 SYNMO15061 1565 aa11.7□□□□□ -0.54
RN7SL549P-201ENST00000478997 ARHGAP23Q9P227 1491 aa11.7□□□□□ -0.54
RN7SL549P-201ENST00000478997 IQGAP3Q86VI3 1631 aa11.69□□□□□ -0.54
RN7SL549P-201ENST00000478997 SLIT1O75093 1534 aa11.69□□□□□ -0.54
RN7SL549P-201ENST00000478997 PIK3C2BO00750 1634 aa11.68□□□□□ -0.54
RN7SL549P-201ENST00000478997 ANKLE2Q86XL3 938 aa11.68□□□□□ -0.54
RN7SL549P-201ENST00000478997 PPARGC1BQ86YN6 1023 aaKnown RBP11.68□□□□□ -0.54
RN7SL549P-201ENST00000478997 NPHP4O75161 1426 aaPredicted RBP11.67□□□□□ -0.54
RN7SL549P-201ENST00000478997 IQGAP1P46940 1657 aa11.66□□□□□ -0.54
RN7SL549P-201ENST00000478997 ADGRB3O60242 1522 aa11.65□□□□□ -0.54
RN7SL549P-201ENST00000478997 SCAF11Q99590 1463 aaKnown RBP11.65□□□□□ -0.54
RN7SL549P-201ENST00000478997 E9PCH4 1651 aa11.65□□□□□ -0.55
RN7SL549P-201ENST00000478997 ZNF335Q9H4Z2 1342 aaPredicted RBP11.64□□□□□ -0.55
RN7SL549P-201ENST00000478997 SLC52A1Q9NWF4 448 aa11.64□□□□□ -0.55
RN7SL549P-201ENST00000478997 CPS1P31327 1500 aa11.64□□□□□ -0.55
RN7SL549P-201ENST00000478997 NAIPQ13075 1403 aa11.63□□□□□ -0.55
RN7SL549P-201ENST00000478997 ITGAEP38570 1179 aa11.63□□□□□ -0.55
RN7SL549P-201ENST00000478997 TMEM2Q9UHN6 1383 aa11.63□□□□□ -0.55
RN7SL549P-201ENST00000478997 HFM1A2PYH4 1435 aa11.62□□□□□ -0.55
RN7SL549P-201ENST00000478997 IDI1Q13907 227 aa11.62□□□□□ -0.55
RN7SL549P-201ENST00000478997 NUP155O75694 1391 aa11.61□□□□□ -0.55
RN7SL549P-201ENST00000478997 TMEM131LA2VDJ0 1609 aa11.6□□□□□ -0.55
RN7SL549P-201ENST00000478997 LTKP29376 864 aa11.59□□□□□ -0.55
RN7SL549P-201ENST00000478997 EID1Q9Y6B2 187 aa11.59□□□□□ -0.55
RN7SL549P-201ENST00000478997 TXNDC2Q86VQ3 553 aa11.58□□□□□ -0.56
RN7SL549P-201ENST00000478997 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
RN7SL549P-201ENST00000478997 ZFYVE9O95405 1425 aa11.58□□□□□ -0.56
RN7SL549P-201ENST00000478997 SPHKAPQ2M3C7 1700 aa11.57□□□□□ -0.56
RN7SL549P-201ENST00000478997 STRCP1A6NGW2 1772 aa11.57□□□□□ -0.56
RN7SL549P-201ENST00000478997 MYO5BQ9ULV0 1848 aa11.57□□□□□ -0.56
RN7SL549P-201ENST00000478997 TRPM2O94759 1503 aa11.54□□□□□ -0.56
RN7SL549P-201ENST00000478997 LRRC7Q96NW7 1537 aa11.54□□□□□ -0.56
RN7SL549P-201ENST00000478997 PLEKHG1Q9ULL1 1385 aa11.54□□□□□ -0.56
RN7SL549P-201ENST00000478997 RIMS2Q9UQ26 1411 aa11.53□□□□□ -0.56
RN7SL549P-201ENST00000478997 NWD1Q149M9 1564 aa11.53□□□□□ -0.56
RN7SL549P-201ENST00000478997 HDGFP51858 240 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms