RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, human

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMDS-204	ENST00000476972	FBXO31	Q5XUX0	539 aa	Predicted RBP	29.87	■■■□□ 2.37
GMDS-204	ENST00000476972	TSPY4	P0CV99	314 aa		29.84	■■■□□ 2.37
GMDS-204	ENST00000476972	TSPY10	P0CW01	314 aa		29.84	■■■□□ 2.37
GMDS-204	ENST00000476972	PLA2R1	Q13018	1463 aa		29.84	■■■□□ 2.37
GMDS-204	ENST00000476972	WASHC2C	Q9Y4E1	1318 aa		29.83	■■■□□ 2.37
GMDS-204	ENST00000476972	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	29.81	■■■□□ 2.36
GMDS-204	ENST00000476972	TCOF1	Q13428	1488 aa	Known RBP	29.81	■■■□□ 2.36
GMDS-204	ENST00000476972	IQSEC2	Q5JU85	1478 aa		29.8	■■■□□ 2.36
GMDS-204	ENST00000476972	DISP3	Q9P2K9	1392 aa		29.8	■■■□□ 2.36
GMDS-204	ENST00000476972	MYO3A	Q8NEV4	1616 aa		29.8	■■■□□ 2.36
GMDS-204	ENST00000476972	PTPN23	Q9H3S7	1636 aa		29.78	■■■□□ 2.36
GMDS-204	ENST00000476972	A2ML1	A8K2U0	1454 aa		29.78	■■■□□ 2.36
GMDS-204	ENST00000476972	TNR	Q92752	1358 aa		29.77	■■■□□ 2.36
GMDS-204	ENST00000476972	MAST1	Q9Y2H9	1570 aa		29.77	■■■□□ 2.36
GMDS-204	ENST00000476972	UBAP1L	F5GYI3	381 aa		29.74	■■■□□ 2.35
GMDS-204	ENST00000476972	ZNF142	P52746	1687 aa	Predicted RBP	29.74	■■■□□ 2.35
GMDS-204	ENST00000476972	FGD6	Q6ZV73	1430 aa		29.73	■■■□□ 2.35
GMDS-204	ENST00000476972	ILDR2	Q71H61	639 aa		29.72	■■■□□ 2.35
GMDS-204	ENST00000476972	CROCC2	H7BZ55	1655 aa		29.72	■■■□□ 2.35
GMDS-204	ENST00000476972	PZP	P20742	1482 aa		29.7	■■■□□ 2.35
GMDS-204	ENST00000476972	KDM5D	Q9BY66	1539 aa		29.69	■■■□□ 2.34
GMDS-204	ENST00000476972	DNMT1	P26358	1616 aa	Known RBP	29.68	■■■□□ 2.34
GMDS-204	ENST00000476972	THEMIS	Q8N1K5	641 aa	Predicted RBP	29.68	■■■□□ 2.34
GMDS-204	ENST00000476972	ANKLE2	Q86XL3	938 aa		29.66	■■■□□ 2.34
GMDS-204	ENST00000476972	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	29.64	■■■□□ 2.34
GMDS-204	ENST00000476972	SHANK2	Q9UPX8	1470 aa		29.64	■■■□□ 2.34
GMDS-204	ENST00000476972	FAM135A	Q9P2D6	1515 aa		29.64	■■■□□ 2.34
GMDS-204	ENST00000476972	ABCC5	O15440	1437 aa		29.62	■■■□□ 2.33
GMDS-204	ENST00000476972	DAPK1	P53355	1430 aa		29.61	■■■□□ 2.33
GMDS-204	ENST00000476972	EIF2AK4	Q9P2K8	1649 aa	Known RBP	29.58	■■■□□ 2.33
GMDS-204	ENST00000476972	NLRP1	Q9C000	1473 aa		29.57	■■■□□ 2.32
GMDS-204	ENST00000476972	RNF17	Q9BXT8	1623 aa	Known RBP	29.56	■■■□□ 2.32
GMDS-204	ENST00000476972	DUOX2	Q9NRD8	1548 aa		29.55	■■■□□ 2.32
GMDS-204	ENST00000476972	SOCS7	O14512	581 aa		29.54	■■■□□ 2.32
GMDS-204	ENST00000476972	NEURL4	Q96JN8	1562 aa		29.52	■■■□□ 2.32
GMDS-204	ENST00000476972	UGGT1	Q9NYU2	1555 aa		29.52	■■■□□ 2.32
GMDS-204	ENST00000476972	ABCC3	O15438	1527 aa		29.51	■■■□□ 2.32
GMDS-204	ENST00000476972	KIF15	Q9NS87	1388 aa		29.51	■■■□□ 2.31
GMDS-204	ENST00000476972	PIP4K2B	P78356	416 aa		29.5	■■■□□ 2.31
GMDS-204	ENST00000476972	SCAF1	Q9H7N4	1312 aa	Known RBP	29.49	■■■□□ 2.31
GMDS-204	ENST00000476972	NPHP4	O75161	1426 aa	Predicted RBP	29.49	■■■□□ 2.31
GMDS-204	ENST00000476972	TOM1	O60784	492 aa		29.49	■■■□□ 2.31
GMDS-204	ENST00000476972	MROH1	Q8NDA8	1641 aa		29.49	■■■□□ 2.31
GMDS-204	ENST00000476972	RRP7BP	Q9NSQ0	103 aa		29.48	■■■□□ 2.31
GMDS-204	ENST00000476972	SPATA31D1	Q6ZQQ2	1576 aa		29.47	■■■□□ 2.31
GMDS-204	ENST00000476972	MED14	O60244	1454 aa		29.46	■■■□□ 2.31
GMDS-204	ENST00000476972	ZC3H13	Q5T200	1668 aa	Known RBP	29.46	■■■□□ 2.31
GMDS-204	ENST00000476972	CPS1	P31327	1500 aa		29.45	■■■□□ 2.31
GMDS-204	ENST00000476972	FAM50A	Q14320	339 aa	Known RBP	29.45	■■■□□ 2.31
GMDS-204	ENST00000476972	ERBIN	Q96RT1	1412 aa		29.45	■■■□□ 2.3
GMDS-204	ENST00000476972	HSPA1L	P34931	641 aa		29.44	■■■□□ 2.3
GMDS-204	ENST00000476972	ERVK-7	P63135	1459 aa		29.43	■■■□□ 2.3
GMDS-204	ENST00000476972	ADGRL2	O95490	1459 aa		29.42	■■■□□ 2.3
GMDS-204	ENST00000476972	ANKRD30A	Q9BXX3	1397 aa		29.41	■■■□□ 2.3
GMDS-204	ENST00000476972	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	29.41	■■■□□ 2.3
GMDS-204	ENST00000476972	POLR1A	O95602	1720 aa	Predicted RBP	29.4	■■■□□ 2.3
GMDS-204	ENST00000476972	PPARGC1B	Q86YN6	1023 aa	Known RBP	29.4	■■■□□ 2.3
GMDS-204	ENST00000476972	CHIC2	Q9UKJ5	165 aa		29.4	■■■□□ 2.3
GMDS-204	ENST00000476972	PRDM15	P57071	1507 aa	Predicted RBP	29.4	■■■□□ 2.3
GMDS-204	ENST00000476972	CEP152	O94986	1710 aa		29.4	■■■□□ 2.3
GMDS-204	ENST00000476972	VWDE	Q8N2E2	1590 aa		29.39	■■■□□ 2.3
GMDS-204	ENST00000476972	DEPDC5	O75140	1603 aa		29.38	■■■□□ 2.29
GMDS-204	ENST00000476972	LTK	P29376	864 aa		29.34	■■■□□ 2.29
GMDS-204	ENST00000476972	TXNDC2	Q86VQ3	553 aa		29.34	■■■□□ 2.29
GMDS-204	ENST00000476972	ARHGAP31	Q2M1Z3	1444 aa		29.33	■■■□□ 2.29
GMDS-204	ENST00000476972	EID1	Q9Y6B2	187 aa		29.27	■■■□□ 2.28
GMDS-204	ENST00000476972	KANK1	Q14678	1352 aa		29.26	■■■□□ 2.28
GMDS-204	ENST00000476972	IQGAP1	P46940	1657 aa		29.26	■■■□□ 2.27
GMDS-204	ENST00000476972	LRRC7	Q96NW7	1537 aa		29.25	■■■□□ 2.27
GMDS-204	ENST00000476972	SCAF11	Q99590	1463 aa	Known RBP	29.25	■■■□□ 2.27
GMDS-204	ENST00000476972	STAG3	Q9UJ98	1225 aa		29.24	■■■□□ 2.27
GMDS-204	ENST00000476972	ARHGAP23	Q9P227	1491 aa		29.23	■■■□□ 2.27
GMDS-204	ENST00000476972	ANKRD50	Q9ULJ7	1429 aa		29.22	■■■□□ 2.27
GMDS-204	ENST00000476972	IDI1	Q13907	227 aa		29.22	■■■□□ 2.27
GMDS-204	ENST00000476972	SENP3	Q9H4L4	574 aa	Predicted RBP	29.21	■■■□□ 2.27
GMDS-204	ENST00000476972	ALK	Q9UM73	1620 aa		29.2	■■■□□ 2.27
GMDS-204	ENST00000476972	UBR1	Q8IWV7	1749 aa		29.2	■■■□□ 2.26
GMDS-204	ENST00000476972	SLIT1	O75093	1534 aa		29.2	■■■□□ 2.26
GMDS-204	ENST00000476972	ROCK1	Q13464	1354 aa		29.19	■■■□□ 2.26
GMDS-204	ENST00000476972	TMEM2	Q9UHN6	1383 aa		29.19	■■■□□ 2.26
GMDS-204	ENST00000476972	LMTK2	Q8IWU2	1503 aa		29.19	■■■□□ 2.26
GMDS-204	ENST00000476972	CFAP65	Q6ZU64	1925 aa	Known RBP	29.18	■■■□□ 2.26
GMDS-204	ENST00000476972	RRBP1	Q9P2E9	1410 aa	Known RBP	29.18	■■■□□ 2.26
GMDS-204	ENST00000476972	STRCP1	A6NGW2	1772 aa		29.14	■■■□□ 2.26
GMDS-204	ENST00000476972	ITGAE	P38570	1179 aa		29.14	■■■□□ 2.26
GMDS-204	ENST00000476972	EFCAB6	Q5THR3	1501 aa		29.14	■■■□□ 2.25
GMDS-204	ENST00000476972	UNC13B	O14795	1591 aa		29.13	■■■□□ 2.25
GMDS-204	ENST00000476972	MED1	Q15648	1581 aa	Predicted RBP	29.1	■■■□□ 2.25
GMDS-204	ENST00000476972	SLC26A8	Q96RN1	970 aa		29.09	■■■□□ 2.25
GMDS-204	ENST00000476972	PIK3C2B	O00750	1634 aa		29.09	■■■□□ 2.25
GMDS-204	ENST00000476972	SLC52A1	Q9NWF4	448 aa		29.08	■■■□□ 2.25
GMDS-204	ENST00000476972	NOS1	P29475	1434 aa		29.07	■■■□□ 2.24
GMDS-204	ENST00000476972	SYNM	O15061	1565 aa		29.06	■■■□□ 2.24
GMDS-204	ENST00000476972	KCNA6	P17658	529 aa		29.06	■■■□□ 2.24
GMDS-204	ENST00000476972	PHF23	Q9BUL5	403 aa	Predicted RBP	29.06	■■■□□ 2.24
GMDS-204	ENST00000476972	TET3	O43151	1660 aa		29.05	■■■□□ 2.24
GMDS-204	ENST00000476972	GCC2	Q8IWJ2	1684 aa		29.02	■■■□□ 2.24
GMDS-204	ENST00000476972	TMEM94	Q12767	1356 aa		29.01	■■■□□ 2.24
GMDS-204	ENST00000476972	PROSER2	Q86WR7	435 aa	Predicted RBP	29.01	■■■□□ 2.23
GMDS-204	ENST00000476972	RBM33	Q96EV2	1170 aa	Known RBP	29.01	■■■□□ 2.23

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