RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 RNF17Q9BXT8 1623 aaKnown RBP22.08■■□□□ 1.13
SLC6A8-209ENST00000476466 KDM5DQ9BY66 1539 aa22.07■■□□□ 1.12
SLC6A8-209ENST00000476466 MYO3AQ8NEV4 1616 aa22.06■■□□□ 1.12
SLC6A8-209ENST00000476466 EIF2AK4Q9P2K8 1649 aaKnown RBP22.04■■□□□ 1.12
SLC6A8-209ENST00000476466 KIF15Q9NS87 1388 aa22.02■■□□□ 1.12
SLC6A8-209ENST00000476466 DUOX2Q9NRD8 1548 aa22.02■■□□□ 1.12
SLC6A8-209ENST00000476466 FAM135AQ9P2D6 1515 aa22.02■■□□□ 1.12
SLC6A8-209ENST00000476466 PPP6R1Q9UPN7 881 aa22.02■■□□□ 1.12
SLC6A8-209ENST00000476466 ZNF142P52746 1687 aaPredicted RBP22.01■■□□□ 1.11
SLC6A8-209ENST00000476466 ABCC3O15438 1527 aa22.01■■□□□ 1.11
SLC6A8-209ENST00000476466 PZPP20742 1482 aa22■■□□□ 1.11
SLC6A8-209ENST00000476466 ILDR1Q86SU0 546 aaPredicted RBP21.99■■□□□ 1.11
SLC6A8-209ENST00000476466 CEP170BQ9Y4F5 1589 aaPredicted RBP21.99■■□□□ 1.11
SLC6A8-209ENST00000476466 NCOA1Q15788 1441 aa21.97■■□□□ 1.11
SLC6A8-209ENST00000476466 FBXO31Q5XUX0 539 aaPredicted RBP21.97■■□□□ 1.11
SLC6A8-209ENST00000476466 RRP7BPQ9NSQ0 103 aa21.97■■□□□ 1.11
SLC6A8-209ENST00000476466 CAMSAP1Q5T5Y3 1602 aa21.96■■□□□ 1.11
SLC6A8-209ENST00000476466 PPARGC1BQ86YN6 1023 aaKnown RBP21.96■■□□□ 1.11
SLC6A8-209ENST00000476466 CEP152O94986 1710 aa21.96■■□□□ 1.11
SLC6A8-209ENST00000476466 CHIC2Q9UKJ5 165 aa21.95■■□□□ 1.1
SLC6A8-209ENST00000476466 WASHC2CQ9Y4E1 1318 aa21.95■■□□□ 1.1
SLC6A8-209ENST00000476466 ERBINQ96RT1 1412 aa21.95■■□□□ 1.1
SLC6A8-209ENST00000476466 PRDM15P57071 1507 aaPredicted RBP21.95■■□□□ 1.1
SLC6A8-209ENST00000476466 ZC3H13Q5T200 1668 aaKnown RBP21.95■■□□□ 1.1
SLC6A8-209ENST00000476466 ADGRL2O95490 1459 aa21.94■■□□□ 1.1
SLC6A8-209ENST00000476466 DEPDC5O75140 1603 aa21.93■■□□□ 1.1
SLC6A8-209ENST00000476466 FAM50AQ14320 339 aaKnown RBP21.92■■□□□ 1.1
SLC6A8-209ENST00000476466 TNRQ92752 1358 aa21.91■■□□□ 1.1
SLC6A8-209ENST00000476466 A2ML1A8K2U0 1454 aa21.9■■□□□ 1.1
SLC6A8-209ENST00000476466 ANKRD30AQ9BXX3 1397 aa21.88■■□□□ 1.09
SLC6A8-209ENST00000476466 SPATA31D1Q6ZQQ2 1576 aa21.88■■□□□ 1.09
SLC6A8-209ENST00000476466 ERVK-7P63135 1459 aa21.87■■□□□ 1.09
SLC6A8-209ENST00000476466 PTPRTO14522 1441 aa21.87■■□□□ 1.09
SLC6A8-209ENST00000476466 PLA2R1Q13018 1463 aa21.86■■□□□ 1.09
SLC6A8-209ENST00000476466 VWDEQ8N2E2 1590 aa21.85■■□□□ 1.09
SLC6A8-209ENST00000476466 NCKAP5LQ9HCH0 1330 aa21.84■■□□□ 1.09
SLC6A8-209ENST00000476466 NEURL4Q96JN8 1562 aa21.81■■□□□ 1.08
SLC6A8-209ENST00000476466 NLRP1Q9C000 1473 aa21.8■■□□□ 1.08
SLC6A8-209ENST00000476466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.8■■□□□ 1.084e-10■□□□□ 9
SLC6A8-209ENST00000476466 CFAP65Q6ZU64 1925 aaKnown RBP21.79■■□□□ 1.08
SLC6A8-209ENST00000476466 LTBP4Q8N2S1 1624 aa21.79■■□□□ 1.08
SLC6A8-209ENST00000476466 LMTK2Q8IWU2 1503 aa21.79■■□□□ 1.08
SLC6A8-209ENST00000476466 ARHGAP31Q2M1Z3 1444 aa21.79■■□□□ 1.08
SLC6A8-209ENST00000476466 ANKRD50Q9ULJ7 1429 aa21.79■■□□□ 1.08
SLC6A8-209ENST00000476466 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
SLC6A8-209ENST00000476466 UGGT1Q9NYU2 1555 aa21.78■■□□□ 1.08
SLC6A8-209ENST00000476466 FBXO41Q8TF61 875 aa21.77■■□□□ 1.08
SLC6A8-209ENST00000476466 CERKQ8TCT0 537 aa21.76■■□□□ 1.07
SLC6A8-209ENST00000476466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.75■■□□□ 1.076e-29■■■■□ 21.4
SLC6A8-209ENST00000476466 POLR1AO95602 1720 aaPredicted RBP21.75■■□□□ 1.07
SLC6A8-209ENST00000476466 EFCAB6Q5THR3 1501 aa21.75■■□□□ 1.07
SLC6A8-209ENST00000476466 ROCK1Q13464 1354 aa21.74■■□□□ 1.07
SLC6A8-209ENST00000476466 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
SLC6A8-209ENST00000476466 PKD2Q13563 968 aa21.73■■□□□ 1.07
SLC6A8-209ENST00000476466 UNC13BO14795 1591 aa21.73■■□□□ 1.07
SLC6A8-209ENST00000476466 UBR1Q8IWV7 1749 aa21.72■■□□□ 1.07
SLC6A8-209ENST00000476466 SYNMO15061 1565 aa21.72■■□□□ 1.07
SLC6A8-209ENST00000476466 KANK1Q14678 1352 aa21.71■■□□□ 1.07
SLC6A8-209ENST00000476466 ITGAEP38570 1179 aa21.7■■□□□ 1.06
SLC6A8-209ENST00000476466 ZNF335Q9H4Z2 1342 aaPredicted RBP21.7■■□□□ 1.06
SLC6A8-209ENST00000476466 PIK3C2BO00750 1634 aa21.69■■□□□ 1.06
SLC6A8-209ENST00000476466 NOS1P29475 1434 aa21.67■■□□□ 1.06
SLC6A8-209ENST00000476466 TET3O43151 1660 aa21.66■■□□□ 1.06
SLC6A8-209ENST00000476466 MED14O60244 1454 aa21.64■■□□□ 1.06
SLC6A8-209ENST00000476466 THEMISQ8N1K5 641 aaPredicted RBP21.64■■□□□ 1.05
SLC6A8-209ENST00000476466 ARHGAP23Q9P227 1491 aa21.63■■□□□ 1.05
SLC6A8-209ENST00000476466 IQGAP3Q86VI3 1631 aa21.62■■□□□ 1.05
SLC6A8-209ENST00000476466 NPHP4O75161 1426 aaPredicted RBP21.62■■□□□ 1.05
SLC6A8-209ENST00000476466 SLIT1O75093 1534 aa21.61■■□□□ 1.05
SLC6A8-209ENST00000476466 IQGAP1P46940 1657 aa21.61■■□□□ 1.05
SLC6A8-209ENST00000476466 GCC2Q8IWJ2 1684 aa21.61■■□□□ 1.05
SLC6A8-209ENST00000476466 ANKLE2Q86XL3 938 aa21.61■■□□□ 1.05
SLC6A8-209ENST00000476466 E9PCH4 1651 aa21.6■■□□□ 1.05
SLC6A8-209ENST00000476466 RPRD2Q5VT52 1461 aaKnown RBP21.59■■□□□ 1.05
SLC6A8-209ENST00000476466 IDI1Q13907 227 aa21.59■■□□□ 1.05
SLC6A8-209ENST00000476466 LTKP29376 864 aa21.58■■□□□ 1.05
SLC6A8-209ENST00000476466 SCAF11Q99590 1463 aaKnown RBP21.58■■□□□ 1.04
SLC6A8-209ENST00000476466 ADGRB3O60242 1522 aa21.57■■□□□ 1.04
SLC6A8-209ENST00000476466 KDM5AP29375 1690 aaKnown RBP21.56■■□□□ 1.04
SLC6A8-209ENST00000476466 NAIPQ13075 1403 aa21.55■■□□□ 1.04
SLC6A8-209ENST00000476466 IQSEC2Q5JU85 1478 aa21.55■■□□□ 1.04
SLC6A8-209ENST00000476466 STRCP1A6NGW2 1772 aa21.55■■□□□ 1.04
SLC6A8-209ENST00000476466 TMEM2Q9UHN6 1383 aa21.54■■□□□ 1.04
SLC6A8-209ENST00000476466 NUP155O75694 1391 aa21.53■■□□□ 1.04
SLC6A8-209ENST00000476466 MYO5BQ9ULV0 1848 aa21.52■■□□□ 1.04
SLC6A8-209ENST00000476466 TMEM131LA2VDJ0 1609 aa21.49■■□□□ 1.03
SLC6A8-209ENST00000476466 TXNDC2Q86VQ3 553 aa21.49■■□□□ 1.03
SLC6A8-209ENST00000476466 CPS1P31327 1500 aa21.49■■□□□ 1.03
SLC6A8-209ENST00000476466 HFM1A2PYH4 1435 aa21.47■■□□□ 1.03
SLC6A8-209ENST00000476466 ZFYVE9O95405 1425 aa21.46■■□□□ 1.03
SLC6A8-209ENST00000476466 SLC52A1Q9NWF4 448 aa21.46■■□□□ 1.03
SLC6A8-209ENST00000476466 STAG3Q9UJ98 1225 aa21.45■■□□□ 1.02
SLC6A8-209ENST00000476466 ALKQ9UM73 1620 aa21.44■■□□□ 1.02
SLC6A8-209ENST00000476466 SPHKAPQ2M3C7 1700 aa21.42■■□□□ 1.02
SLC6A8-209ENST00000476466 LRRC7Q96NW7 1537 aa21.42■■□□□ 1.02
SLC6A8-209ENST00000476466 EID1Q9Y6B2 187 aa21.4■■□□□ 1.02
SLC6A8-209ENST00000476466 RIMS2Q9UQ26 1411 aa21.39■■□□□ 1.02
SLC6A8-209ENST00000476466 UBAP1LF5GYI3 381 aa21.38■■□□□ 1.01
SLC6A8-209ENST00000476466 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
SLC6A8-209ENST00000476466 CLTCL1P53675 1640 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms