RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 CPS1P31327 1500 aa25.76■■□□□ 1.71
ITGB1-211ENST00000475184 KDM5DQ9BY66 1539 aa25.75■■□□□ 1.71
ITGB1-211ENST00000475184 FAM135AQ9P2D6 1515 aa25.75■■□□□ 1.71
ITGB1-211ENST00000475184 TNRQ92752 1358 aa25.75■■□□□ 1.71
ITGB1-211ENST00000475184 PZPP20742 1482 aa25.73■■□□□ 1.71
ITGB1-211ENST00000475184 CEP162Q5TB80 1403 aa25.72■■□□□ 1.71
ITGB1-211ENST00000475184 MED1Q15648 1581 aaPredicted RBP25.72■■□□□ 1.71
ITGB1-211ENST00000475184 SHANK2Q9UPX8 1470 aa25.72■■□□□ 1.71
ITGB1-211ENST00000475184 SCAF1Q9H7N4 1312 aaKnown RBP25.71■■□□□ 1.71
ITGB1-211ENST00000475184 KIF3BO15066 747 aa25.7■■□□□ 1.7
ITGB1-211ENST00000475184 FBXO31Q5XUX0 539 aaPredicted RBP25.7■■□□□ 1.7
ITGB1-211ENST00000475184 CCDC141Q6ZP82 1450 aa25.7■■□□□ 1.7
ITGB1-211ENST00000475184 HSPA1LP34931 641 aa25.69■■□□□ 1.7
ITGB1-211ENST00000475184 PIP4K2BP78356 416 aa25.68■■□□□ 1.7
ITGB1-211ENST00000475184 TOM1O60784 492 aa25.67■■□□□ 1.7
ITGB1-211ENST00000475184 CAMSAP2Q08AD1 1489 aa25.66■■□□□ 1.7
ITGB1-211ENST00000475184 VWDEQ8N2E2 1590 aa25.66■■□□□ 1.7
ITGB1-211ENST00000475184 DEPDC5O75140 1603 aa25.65■■□□□ 1.7
ITGB1-211ENST00000475184 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.64■■□□□ 1.69
ITGB1-211ENST00000475184 NLRP1Q9C000 1473 aa25.64■■□□□ 1.69
ITGB1-211ENST00000475184 WASHC2CQ9Y4E1 1318 aa25.63■■□□□ 1.69
ITGB1-211ENST00000475184 ANKLE2Q86XL3 938 aa25.63■■□□□ 1.69
ITGB1-211ENST00000475184 UGGT1Q9NYU2 1555 aa25.63■■□□□ 1.69
ITGB1-211ENST00000475184 MIA2Q96PC5 1412 aa25.62■■□□□ 1.69
ITGB1-211ENST00000475184 IQGAP1P46940 1657 aa25.61■■□□□ 1.69
ITGB1-211ENST00000475184 MED14O60244 1454 aa25.61■■□□□ 1.69
ITGB1-211ENST00000475184 NCOA2Q15596 1464 aa25.61■■□□□ 1.69
ITGB1-211ENST00000475184 THEMISQ8N1K5 641 aaPredicted RBP25.6■■□□□ 1.69
ITGB1-211ENST00000475184 NPHP4O75161 1426 aaPredicted RBP25.59■■□□□ 1.69
ITGB1-211ENST00000475184 ARHGEF5Q12774 1597 aa25.59■■□□□ 1.69
ITGB1-211ENST00000475184 ALKQ9UM73 1620 aa25.59■■□□□ 1.69
ITGB1-211ENST00000475184 RSPH4AQ5TD94 716 aa25.58■■□□□ 1.69
ITGB1-211ENST00000475184 RNF17Q9BXT8 1623 aaKnown RBP25.57■■□□□ 1.68
ITGB1-211ENST00000475184 STRCP1A6NGW2 1772 aa25.56■■□□□ 1.68
ITGB1-211ENST00000475184 ZC3H13Q5T200 1668 aaKnown RBP25.56■■□□□ 1.68
ITGB1-211ENST00000475184 CFAP65Q6ZU64 1925 aaKnown RBP25.53■■□□□ 1.68
ITGB1-211ENST00000475184 ABCC3O15438 1527 aa25.52■■□□□ 1.68
ITGB1-211ENST00000475184 SYNMO15061 1565 aa25.52■■□□□ 1.68
ITGB1-211ENST00000475184 EIF2AK4Q9P2K8 1649 aaKnown RBP25.49■■□□□ 1.67
ITGB1-211ENST00000475184 TSPY4P0CV99 314 aa25.49■■□□□ 1.67
ITGB1-211ENST00000475184 TSPY10P0CW01 314 aa25.49■■□□□ 1.67
ITGB1-211ENST00000475184 MAST1Q9Y2H9 1570 aa25.48■■□□□ 1.67
ITGB1-211ENST00000475184 LRRC7Q96NW7 1537 aa25.47■■□□□ 1.67
ITGB1-211ENST00000475184 CEP152O94986 1710 aa25.47■■□□□ 1.67
ITGB1-211ENST00000475184 PHF23Q9BUL5 403 aaPredicted RBP25.47■■□□□ 1.67
ITGB1-211ENST00000475184 ERVK-7P63135 1459 aa25.47■■□□□ 1.67
ITGB1-211ENST00000475184 UBR1Q8IWV7 1749 aa25.46■■□□□ 1.67
ITGB1-211ENST00000475184 MROH1Q8NDA8 1641 aa25.45■■□□□ 1.66
ITGB1-211ENST00000475184 XIRP1Q702N8 1843 aaKnown RBP25.38■■□□□ 1.65
ITGB1-211ENST00000475184 SENP3Q9H4L4 574 aaPredicted RBP25.38■■□□□ 1.65
ITGB1-211ENST00000475184 LRRC9Q6ZRR7 1453 aa25.38■■□□□ 1.65
ITGB1-211ENST00000475184 SCAF11Q99590 1463 aaKnown RBP25.38■■□□□ 1.65
ITGB1-211ENST00000475184 DUOX2Q9NRD8 1548 aa25.33■■□□□ 1.65
ITGB1-211ENST00000475184 ARHGAP23Q9P227 1491 aa25.33■■□□□ 1.65
ITGB1-211ENST00000475184 SLIT1O75093 1534 aa25.32■■□□□ 1.64
ITGB1-211ENST00000475184 PRDM15P57071 1507 aaPredicted RBP25.3■■□□□ 1.64
ITGB1-211ENST00000475184 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
ITGB1-211ENST00000475184 LTKP29376 864 aa25.28■■□□□ 1.64
ITGB1-211ENST00000475184 MYOM3Q5VTT5 1437 aa25.28■■□□□ 1.64
ITGB1-211ENST00000475184 CROCC2H7BZ55 1655 aa25.27■■□□□ 1.64
ITGB1-211ENST00000475184 ARHGAP31Q2M1Z3 1444 aa25.27■■□□□ 1.64
ITGB1-211ENST00000475184 PIK3C2BO00750 1634 aa25.26■■□□□ 1.63
ITGB1-211ENST00000475184 TXNDC2Q86VQ3 553 aa25.26■■□□□ 1.63
ITGB1-211ENST00000475184 MAP3K1Q13233 1512 aa25.23■■□□□ 1.63
ITGB1-211ENST00000475184 KIF15Q9NS87 1388 aa25.22■■□□□ 1.63
ITGB1-211ENST00000475184 EID1Q9Y6B2 187 aa25.22■■□□□ 1.63
ITGB1-211ENST00000475184 KDM5AP29375 1690 aaKnown RBP25.22■■□□□ 1.63
ITGB1-211ENST00000475184 ERBINQ96RT1 1412 aa25.21■■□□□ 1.63
ITGB1-211ENST00000475184 KANK4Q5T7N3 995 aaPredicted RBP25.21■■□□□ 1.63
ITGB1-211ENST00000475184 RGS17Q9UGC6 210 aaPredicted RBP25.2■■□□□ 1.62
ITGB1-211ENST00000475184 TMEM2Q9UHN6 1383 aa25.18■■□□□ 1.62
ITGB1-211ENST00000475184 FAM135BQ49AJ0 1406 aa25.17■■□□□ 1.62
ITGB1-211ENST00000475184 EFCAB6Q5THR3 1501 aa25.17■■□□□ 1.62
ITGB1-211ENST00000475184 ROBO1Q9Y6N7 1651 aa25.15■■□□□ 1.62
ITGB1-211ENST00000475184 PTPN23Q9H3S7 1636 aa25.15■■□□□ 1.62
ITGB1-211ENST00000475184 ABCC5O15440 1437 aa25.14■■□□□ 1.62
ITGB1-211ENST00000475184 RRP7BPQ9NSQ0 103 aa25.14■■□□□ 1.62
ITGB1-211ENST00000475184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.13■■□□□ 1.611e-12■□□□□ 10
ITGB1-211ENST00000475184 STAG3Q9UJ98 1225 aa25.13■■□□□ 1.61
ITGB1-211ENST00000475184 TMEM94Q12767 1356 aa25.13■■□□□ 1.61
ITGB1-211ENST00000475184 KANK1Q14678 1352 aa25.12■■□□□ 1.61
ITGB1-211ENST00000475184 TET3O43151 1660 aa25.1■■□□□ 1.61
ITGB1-211ENST00000475184 LMTK2Q8IWU2 1503 aa25.1■■□□□ 1.61
ITGB1-211ENST00000475184 DAPK1P53355 1430 aa25.09■■□□□ 1.61
ITGB1-211ENST00000475184 KCNA6P17658 529 aa25.08■■□□□ 1.61
ITGB1-211ENST00000475184 NWD1Q149M9 1564 aa25.07■■□□□ 1.6
ITGB1-211ENST00000475184 ADGRB3O60242 1522 aa25.07■■□□□ 1.6
ITGB1-211ENST00000475184 IDI1Q13907 227 aa25.06■■□□□ 1.6
ITGB1-211ENST00000475184 NKTRP30414 1462 aaKnown RBP25.06■■□□□ 1.6
ITGB1-211ENST00000475184 SLC26A8Q96RN1 970 aa25.05■■□□□ 1.6
ITGB1-211ENST00000475184 POTEAQ6S8J7 498 aa25.04■■□□□ 1.6
ITGB1-211ENST00000475184 PROSER2Q86WR7 435 aaPredicted RBP25.04■■□□□ 1.6
ITGB1-211ENST00000475184 MYO5BQ9ULV0 1848 aa25.02■■□□□ 1.6
ITGB1-211ENST00000475184 RBM33Q96EV2 1170 aaKnown RBP25.02■■□□□ 1.6
ITGB1-211ENST00000475184 PHLPP1O60346 1717 aa25.02■■□□□ 1.6
ITGB1-211ENST00000475184 NOS1P29475 1434 aa25.02■■□□□ 1.6
ITGB1-211ENST00000475184 LOC105371045A0A1W2PR82 267 aa25.01■■□□□ 1.59
ITGB1-211ENST00000475184 ANKRD30AQ9BXX3 1397 aa25■■□□□ 1.59
ITGB1-211ENST00000475184 FGD6Q6ZV73 1430 aa25■■□□□ 1.59
ITGB1-211ENST00000475184 CHD2O14647 1828 aaKnown RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms