RNA–Protein interactions for RNA: ENST00000474128.1

LAMA5-208, Transcript of laminin subunit alpha 5, humanhuman

TSL 3

Gene LAMA5, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-208ENST00000474128 TSPY4P0CV99 314 aa27.48■■□□□ 1.99
LAMA5-208ENST00000474128 TSPY10P0CW01 314 aa27.48■■□□□ 1.99
LAMA5-208ENST00000474128 KDM5DQ9BY66 1539 aa27.47■■□□□ 1.99
LAMA5-208ENST00000474128 LRRC9Q6ZRR7 1453 aa27.47■■□□□ 1.99
LAMA5-208ENST00000474128 ZNF335Q9H4Z2 1342 aaPredicted RBP27.46■■□□□ 1.99
LAMA5-208ENST00000474128 PZPP20742 1482 aa27.44■■□□□ 1.98
LAMA5-208ENST00000474128 WASHC2CQ9Y4E1 1318 aa27.44■■□□□ 1.98
LAMA5-208ENST00000474128 DNMT1P26358 1616 aaKnown RBP27.44■■□□□ 1.98
LAMA5-208ENST00000474128 TNRQ92752 1358 aa27.44■■□□□ 1.98
LAMA5-208ENST00000474128 LOC105371045A0A1W2PR82 267 aa27.43■■□□□ 1.98
LAMA5-208ENST00000474128 FBXO31Q5XUX0 539 aaPredicted RBP27.43■■□□□ 1.98
LAMA5-208ENST00000474128 MAP3K1Q13233 1512 aa27.39■■□□□ 1.98
LAMA5-208ENST00000474128 DISP3Q9P2K9 1392 aa27.38■■□□□ 1.97
LAMA5-208ENST00000474128 KANK4Q5T7N3 995 aaPredicted RBP27.36■■□□□ 1.97
LAMA5-208ENST00000474128 MAST1Q9Y2H9 1570 aa27.35■■□□□ 1.97
LAMA5-208ENST00000474128 MIA2Q96PC5 1412 aa27.34■■□□□ 1.97
LAMA5-208ENST00000474128 NLRP1Q9C000 1473 aa27.33■■□□□ 1.97
LAMA5-208ENST00000474128 MYOM3Q5VTT5 1437 aa27.33■■□□□ 1.96
LAMA5-208ENST00000474128 UBAP1LF5GYI3 381 aa27.32■■□□□ 1.96
LAMA5-208ENST00000474128 RNF17Q9BXT8 1623 aaKnown RBP27.31■■□□□ 1.96
LAMA5-208ENST00000474128 THEMISQ8N1K5 641 aaPredicted RBP27.3■■□□□ 1.96
LAMA5-208ENST00000474128 POLR1AO95602 1720 aaPredicted RBP27.3■■□□□ 1.96
LAMA5-208ENST00000474128 ANKLE2Q86XL3 938 aa27.29■■□□□ 1.96
LAMA5-208ENST00000474128 NEURL4Q96JN8 1562 aa27.29■■□□□ 1.96
LAMA5-208ENST00000474128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.28■■□□□ 1.96
LAMA5-208ENST00000474128 EIF2AK4Q9P2K8 1649 aaKnown RBP27.27■■□□□ 1.96
LAMA5-208ENST00000474128 UGGT1Q9NYU2 1555 aa27.26■■□□□ 1.96
LAMA5-208ENST00000474128 ABCC3O15438 1527 aa27.26■■□□□ 1.96
LAMA5-208ENST00000474128 ZC3H13Q5T200 1668 aaKnown RBP27.26■■□□□ 1.95
LAMA5-208ENST00000474128 SPATA31D1Q6ZQQ2 1576 aa27.25■■□□□ 1.95
LAMA5-208ENST00000474128 CPS1P31327 1500 aa27.23■■□□□ 1.95
LAMA5-208ENST00000474128 ILDR2Q71H61 639 aa27.23■■□□□ 1.95
LAMA5-208ENST00000474128 SHANK2Q9UPX8 1470 aa27.21■■□□□ 1.95
LAMA5-208ENST00000474128 DUOX2Q9NRD8 1548 aa27.21■■□□□ 1.95
LAMA5-208ENST00000474128 MED14O60244 1454 aa27.2■■□□□ 1.95
LAMA5-208ENST00000474128 DEPDC5O75140 1603 aa27.19■■□□□ 1.94
LAMA5-208ENST00000474128 MROH1Q8NDA8 1641 aa27.19■■□□□ 1.94
LAMA5-208ENST00000474128 NPHP4O75161 1426 aaPredicted RBP27.19■■□□□ 1.94
LAMA5-208ENST00000474128 ERVK-7P63135 1459 aa27.19■■□□□ 1.94
LAMA5-208ENST00000474128 APLP2Q06481 763 aa27.18■■□□□ 1.94
LAMA5-208ENST00000474128 KIF15Q9NS87 1388 aa27.15■■□□□ 1.94
LAMA5-208ENST00000474128 VWDEQ8N2E2 1590 aa27.14■■□□□ 1.94
LAMA5-208ENST00000474128 ABCC5O15440 1437 aa27.14■■□□□ 1.93
LAMA5-208ENST00000474128 TOM1O60784 492 aa27.13■■□□□ 1.93
LAMA5-208ENST00000474128 ERBINQ96RT1 1412 aa27.13■■□□□ 1.93
LAMA5-208ENST00000474128 SOCS7O14512 581 aa27.12■■□□□ 1.93
LAMA5-208ENST00000474128 CEP152O94986 1710 aa27.12■■□□□ 1.93
LAMA5-208ENST00000474128 PTPN23Q9H3S7 1636 aa27.12■■□□□ 1.93
LAMA5-208ENST00000474128 IQGAP1P46940 1657 aa27.11■■□□□ 1.93
LAMA5-208ENST00000474128 RRP7BPQ9NSQ0 103 aa27.1■■□□□ 1.93
LAMA5-208ENST00000474128 CROCC2H7BZ55 1655 aa27.1■■□□□ 1.93
LAMA5-208ENST00000474128 PRDM15P57071 1507 aaPredicted RBP27.1■■□□□ 1.93
LAMA5-208ENST00000474128 ARHGAP31Q2M1Z3 1444 aa27.09■■□□□ 1.93
LAMA5-208ENST00000474128 SCAF1Q9H7N4 1312 aaKnown RBP27.09■■□□□ 1.93
LAMA5-208ENST00000474128 DAPK1P53355 1430 aa27.07■■□□□ 1.92
LAMA5-208ENST00000474128 PIP4K2BP78356 416 aa27.07■■□□□ 1.92
LAMA5-208ENST00000474128 FGD6Q6ZV73 1430 aa27.07■■□□□ 1.92
LAMA5-208ENST00000474128 CFAP65Q6ZU64 1925 aaKnown RBP27.05■■□□□ 1.92
LAMA5-208ENST00000474128 UBR1Q8IWV7 1749 aa27.04■■□□□ 1.92
LAMA5-208ENST00000474128 HSPA1LP34931 641 aa27.03■■□□□ 1.92
LAMA5-208ENST00000474128 SCAF11Q99590 1463 aaKnown RBP27.01■■□□□ 1.91
LAMA5-208ENST00000474128 KANK1Q14678 1352 aa27.01■■□□□ 1.91
LAMA5-208ENST00000474128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.01■■□□□ 1.91
LAMA5-208ENST00000474128 ANKRD30AQ9BXX3 1397 aa27■■□□□ 1.91
LAMA5-208ENST00000474128 ARHGAP23Q9P227 1491 aa27■■□□□ 1.91
LAMA5-208ENST00000474128 SLIT1O75093 1534 aa26.99■■□□□ 1.91
LAMA5-208ENST00000474128 LRRC7Q96NW7 1537 aa26.97■■□□□ 1.91
LAMA5-208ENST00000474128 CHIC2Q9UKJ5 165 aa26.97■■□□□ 1.91
LAMA5-208ENST00000474128 LTKP29376 864 aa26.96■■□□□ 1.91
LAMA5-208ENST00000474128 TXNDC2Q86VQ3 553 aa26.96■■□□□ 1.91
LAMA5-208ENST00000474128 STRCP1A6NGW2 1772 aa26.96■■□□□ 1.91
LAMA5-208ENST00000474128 SYNMO15061 1565 aa26.96■■□□□ 1.91
LAMA5-208ENST00000474128 LMTK2Q8IWU2 1503 aa26.95■■□□□ 1.9
LAMA5-208ENST00000474128 ALKQ9UM73 1620 aa26.94■■□□□ 1.9
LAMA5-208ENST00000474128 EID1Q9Y6B2 187 aa26.94■■□□□ 1.9
LAMA5-208ENST00000474128 STAG3Q9UJ98 1225 aa26.91■■□□□ 1.9
LAMA5-208ENST00000474128 PIK3C2BO00750 1634 aa26.9■■□□□ 1.9
LAMA5-208ENST00000474128 TMEM2Q9UHN6 1383 aa26.9■■□□□ 1.9
LAMA5-208ENST00000474128 ADGRL2O95490 1459 aa26.88■■□□□ 1.89
LAMA5-208ENST00000474128 MED1Q15648 1581 aaPredicted RBP26.88■■□□□ 1.89
LAMA5-208ENST00000474128 IDI1Q13907 227 aa26.87■■□□□ 1.89
LAMA5-208ENST00000474128 KDM5AP29375 1690 aaKnown RBP26.85■■□□□ 1.89
LAMA5-208ENST00000474128 EFCAB6Q5THR3 1501 aa26.85■■□□□ 1.89
LAMA5-208ENST00000474128 NOS1P29475 1434 aa26.83■■□□□ 1.89
LAMA5-208ENST00000474128 FAM50AQ14320 339 aaKnown RBP26.83■■□□□ 1.89
LAMA5-208ENST00000474128 SLC52A1Q9NWF4 448 aa26.79■■□□□ 1.88
LAMA5-208ENST00000474128 ANKRD50Q9ULJ7 1429 aa26.79■■□□□ 1.88
LAMA5-208ENST00000474128 ADGRB3O60242 1522 aa26.76■■□□□ 1.87
LAMA5-208ENST00000474128 RPRD2Q5VT52 1461 aaKnown RBP26.76■■□□□ 1.87
LAMA5-208ENST00000474128 KCNA6P17658 529 aa26.74■■□□□ 1.87
LAMA5-208ENST00000474128 SENP3Q9H4L4 574 aaPredicted RBP26.74■■□□□ 1.87
LAMA5-208ENST00000474128 XIRP1Q702N8 1843 aaKnown RBP26.74■■□□□ 1.87
LAMA5-208ENST00000474128 TET3O43151 1660 aa26.73■■□□□ 1.87
LAMA5-208ENST00000474128 PHF23Q9BUL5 403 aaPredicted RBP26.73■■□□□ 1.87
LAMA5-208ENST00000474128 SLC26A8Q96RN1 970 aa26.72■■□□□ 1.87
LAMA5-208ENST00000474128 TMEM94Q12767 1356 aa26.71■■□□□ 1.87
LAMA5-208ENST00000474128 FAM135BQ49AJ0 1406 aa26.66■■□□□ 1.86
LAMA5-208ENST00000474128 PROSER2Q86WR7 435 aaPredicted RBP26.66■■□□□ 1.86
LAMA5-208ENST00000474128 BCANQ96GW7 911 aa26.65■■□□□ 1.86
LAMA5-208ENST00000474128 NKTRP30414 1462 aaKnown RBP26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms