RNA–Protein interactions for RNA: ENST00000474128.1

LAMA5-208, Transcript of laminin subunit alpha 5, humanhuman

TSL 3

Gene LAMA5, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-208ENST00000474128 NISCHQ9Y2I1 1504 aa43.43■■■■■ 4.54
LAMA5-208ENST00000474128 ABCC9O60706 1549 aa39.03■■■■□ 3.84
LAMA5-208ENST00000474128 CCDC180Q9P1Z9 1646 aa38.98■■■■□ 3.83
LAMA5-208ENST00000474128 RB1CC1Q8TDY2 1594 aa37.15■■■■□ 3.54
LAMA5-208ENST00000474128 NACADO15069 1562 aa36.89■■■■□ 3.5
LAMA5-208ENST00000474128 DCAF8L2P0C7V8 631 aa36.66■■■■□ 3.46
LAMA5-208ENST00000474128 DNAJC5BQ9UF47 199 aa36.66■■■■□ 3.46
LAMA5-208ENST00000474128 MYO15BQ96JP2 1530 aa36.4■■■■□ 3.42
LAMA5-208ENST00000474128 PABPN1Q86U42 306 aaKnown RBP eCLIP36.33■■■■□ 3.41
LAMA5-208ENST00000474128 UNC13AQ9UPW8 1703 aa36.23■■■■□ 3.39
LAMA5-208ENST00000474128 BICRAQ9NZM4 1560 aa36.04■■■■□ 3.36
LAMA5-208ENST00000474128 ZCCHC6Q5VYS8 1495 aaKnown RBP35.98■■■■□ 3.35
LAMA5-208ENST00000474128 DCAF1Q9Y4B6 1507 aa35.89■■■■□ 3.34
LAMA5-208ENST00000474128 SHROOM4Q9ULL8 1493 aa35.63■■■■□ 3.29
LAMA5-208ENST00000474128 SCRIBQ14160 1630 aa35.49■■■■□ 3.27
LAMA5-208ENST00000474128 CC2D2AQ9P2K1 1620 aa35.25■■■■□ 3.23
LAMA5-208ENST00000474128 CECR2Q9BXF3 1484 aa35.19■■■■□ 3.22
LAMA5-208ENST00000474128 EIF4G1Q04637 1599 aaKnown RBP35.18■■■■□ 3.22
LAMA5-208ENST00000474128 NCAPD3P42695 1498 aa34.07■■■■□ 3.04
LAMA5-208ENST00000474128 ATAD2BQ9ULI0 1458 aa33.95■■■■□ 3.02
LAMA5-208ENST00000474128 SMARCA4P51532 1647 aa33.87■■■■□ 3.01
LAMA5-208ENST00000474128 SMARCA2P51531 1590 aa33.85■■■■□ 3.01
LAMA5-208ENST00000474128 HMGXB3Q12766 1538 aa33.8■■■■□ 3
LAMA5-208ENST00000474128 DNAJC5Q9H3Z4 198 aa33.75■■■□□ 2.99
LAMA5-208ENST00000474128 ERCC6Q03468 1493 aa33.73■■■□□ 2.99
LAMA5-208ENST00000474128 BAZ1AQ9NRL2 1556 aaPredicted RBP33.72■■■□□ 2.99
LAMA5-208ENST00000474128 CUX2O14529 1486 aa33.71■■■□□ 2.99
LAMA5-208ENST00000474128 BAZ1BQ9UIG0 1483 aaKnown RBP33.61■■■□□ 2.97
LAMA5-208ENST00000474128 PEG3Q9GZU2 1588 aa33.57■■■□□ 2.96
LAMA5-208ENST00000474128 NESP48681 1621 aa33.5■■■□□ 2.95
LAMA5-208ENST00000474128 MROH2BQ7Z745 1585 aa33.44■■■□□ 2.94
LAMA5-208ENST00000474128 LAMC3Q9Y6N6 1575 aa33.3■■■□□ 2.92
LAMA5-208ENST00000474128 THOC2Q8NI27 1593 aaKnown RBP33.18■■■□□ 2.9
LAMA5-208ENST00000474128 PDS5BQ9NTI5 1447 aa33.13■■■□□ 2.89
LAMA5-208ENST00000474128 KIF21AQ7Z4S6 1674 aa33.04■■■□□ 2.88
LAMA5-208ENST00000474128 CADPSQ9ULU8 1353 aa33.04■■■□□ 2.88
LAMA5-208ENST00000474128 WIZO95785 1651 aa33.01■■■□□ 2.88
LAMA5-208ENST00000474128 MRC2Q9UBG0 1479 aa32.83■■■□□ 2.85
LAMA5-208ENST00000474128 RSF1Q96T23 1441 aaPredicted RBP32.75■■■□□ 2.83
LAMA5-208ENST00000474128 WDR62O43379 1518 aa32.74■■■□□ 2.83
LAMA5-208ENST00000474128 CEP164Q9UPV0 1460 aa32.68■■■□□ 2.82
LAMA5-208ENST00000474128 CFTRP13569 1480 aa32.64■■■□□ 2.82
LAMA5-208ENST00000474128 FANCD2Q9BXW9 1451 aa32.64■■■□□ 2.82
LAMA5-208ENST00000474128 TOP2AP11388 1531 aaKnown RBP32.63■■■□□ 2.81
LAMA5-208ENST00000474128 URB2Q14146 1524 aaKnown RBP32.36■■■□□ 2.77
LAMA5-208ENST00000474128 CCDC88BA6NC98 1476 aa32.26■■■□□ 2.75
LAMA5-208ENST00000474128 PRDM2Q13029 1718 aa32.24■■■□□ 2.75
LAMA5-208ENST00000474128 TRIM41Q8WV44 630 aa32.21■■■□□ 2.75
LAMA5-208ENST00000474128 OSCARQ8IYS5 282 aa32.17■■■□□ 2.74
LAMA5-208ENST00000474128 IFT140Q96RY7 1462 aa32.05■■■□□ 2.72
LAMA5-208ENST00000474128 TOPBP1Q92547 1522 aa32.01■■■□□ 2.72
LAMA5-208ENST00000474128 ABCC8Q09428 1581 aa31.98■■■□□ 2.71
LAMA5-208ENST00000474128 ZNF608Q9ULD9 1512 aaPredicted RBP31.97■■■□□ 2.71
LAMA5-208ENST00000474128 DNMBPQ6XZF7 1577 aa31.89■■■□□ 2.7
LAMA5-208ENST00000474128 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
LAMA5-208ENST00000474128 TARBP1Q13395 1621 aaKnown RBP31.71■■■□□ 2.67
LAMA5-208ENST00000474128 RIMBP3CA6NJZ7 1639 aa31.7■■■□□ 2.66
LAMA5-208ENST00000474128 RIMBP3BA6NNM3 1639 aa31.7■■■□□ 2.66
LAMA5-208ENST00000474128 RIMBP3Q9UFD9 1639 aa31.7■■■□□ 2.66
LAMA5-208ENST00000474128 POLA1P09884 1462 aaPredicted RBP31.68■■■□□ 2.66
LAMA5-208ENST00000474128 AQRO60306 1485 aaKnown RBP eCLIP31.67■■■□□ 2.667e-8■■■■■ 56.8
LAMA5-208ENST00000474128 ARHGEF11O15085 1522 aa31.62■■■□□ 2.65
LAMA5-208ENST00000474128 RAD54L2Q9Y4B4 1467 aa31.55■■■□□ 2.64
LAMA5-208ENST00000474128 SOGA1O94964 1423 aa31.55■■■□□ 2.64
LAMA5-208ENST00000474128 CHD1O14646 1710 aa31.52■■■□□ 2.64
LAMA5-208ENST00000474128 FBLN2P98095 1184 aa31.49■■■□□ 2.63
LAMA5-208ENST00000474128 TDRD9Q8NDG6 1382 aaKnown RBP31.48■■■□□ 2.63
LAMA5-208ENST00000474128 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
LAMA5-208ENST00000474128 WDR97A6NE52 1622 aa31.43■■■□□ 2.62
LAMA5-208ENST00000474128 CUX1P39880 1505 aa31.42■■■□□ 2.62
LAMA5-208ENST00000474128 CYB5RLQ6IPT4 315 aa31.39■■■□□ 2.62
LAMA5-208ENST00000474128 SNAPC4Q5SXM2 1469 aa31.36■■■□□ 2.61
LAMA5-208ENST00000474128 ARAP1Q96P48 1450 aa31.3■■■□□ 2.6
LAMA5-208ENST00000474128 MAGI1Q96QZ7 1491 aaPredicted RBP31.3■■■□□ 2.6
LAMA5-208ENST00000474128 GRIN2BQ13224 1484 aa31.28■■■□□ 2.6
LAMA5-208ENST00000474128 CHMP7Q8WUX9 453 aaPredicted RBP31.27■■■□□ 2.6
LAMA5-208ENST00000474128 SUPT5HO00267 1087 aaKnown RBP31.24■■■□□ 2.59
LAMA5-208ENST00000474128 CLASP1Q7Z460 1538 aa31.21■■■□□ 2.59
LAMA5-208ENST00000474128 SYNJ1O43426 1573 aa31.2■■■□□ 2.58
LAMA5-208ENST00000474128 SYNJ2O15056 1496 aa31.19■■■□□ 2.58
LAMA5-208ENST00000474128 GAPVD1Q14C86 1478 aa31.16■■■□□ 2.58
LAMA5-208ENST00000474128 ABCA10Q8WWZ4 1543 aa31.13■■■□□ 2.57
LAMA5-208ENST00000474128 PBRM1Q86U86 1689 aa31.09■■■□□ 2.57
LAMA5-208ENST00000474128 TRHP20396 242 aaPredicted RBP31.06■■■□□ 2.56
LAMA5-208ENST00000474128 ABCA5Q8WWZ7 1642 aa31.06■■■□□ 2.56
LAMA5-208ENST00000474128 WRNQ14191 1432 aaPredicted RBP eCLIP31■■■□□ 2.55
LAMA5-208ENST00000474128 TOP2BQ02880 1626 aa30.91■■■□□ 2.54
LAMA5-208ENST00000474128 BIVM-ERCC5R4GMW8 1640 aa30.9■■■□□ 2.54
LAMA5-208ENST00000474128 GRIN2AQ12879 1464 aa30.87■■■□□ 2.53
LAMA5-208ENST00000474128 ADAMTS12P58397 1594 aa30.83■■■□□ 2.53
LAMA5-208ENST00000474128 NUP160Q12769 1436 aa30.79■■■□□ 2.52
LAMA5-208ENST00000474128 FHAD1B1AJZ9 1412 aa30.78■■■□□ 2.52
LAMA5-208ENST00000474128 CEP170Q5SW79 1584 aa30.74■■■□□ 2.51
LAMA5-208ENST00000474128 ERICH3Q5RHP9 1530 aa30.73■■■□□ 2.51
LAMA5-208ENST00000474128 ERCC6L2Q5T890 1561 aa30.69■■■□□ 2.5
LAMA5-208ENST00000474128 SHROOM2Q13796 1616 aa30.62■■■□□ 2.49
LAMA5-208ENST00000474128 PRG4Q92954 1404 aaPredicted RBP30.48■■■□□ 2.47
LAMA5-208ENST00000474128 JPH4Q96JJ6 628 aa30.47■■■□□ 2.47
LAMA5-208ENST00000474128 RUSC2Q8N2Y8 1516 aa30.39■■■□□ 2.46
LAMA5-208ENST00000474128 KIF27Q86VH2 1401 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms