RNA–Protein interactions for RNA: ENST00000473388.6

ATXN1-204, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 1,569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-204ENST00000473388 KIF3BO15066 747 aa11.97□□□□□ -0.49
ATXN1-204ENST00000473388 TNRQ92752 1358 aa11.97□□□□□ -0.49
ATXN1-204ENST00000473388 NEURL4Q96JN8 1562 aa11.97□□□□□ -0.49
ATXN1-204ENST00000473388 EHBP1L1Q8N3D4 1523 aa11.97□□□□□ -0.49
ATXN1-204ENST00000473388 DHX29Q7Z478 1369 aaKnown RBP11.97□□□□□ -0.49
ATXN1-204ENST00000473388 MED1Q15648 1581 aaPredicted RBP11.96□□□□□ -0.49
ATXN1-204ENST00000473388 RTEL1-TNFRSF6BF6WH68 1400 aa11.95□□□□□ -0.5
ATXN1-204ENST00000473388 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.95□□□□□ -0.53e-8■■□□□ 14
ATXN1-204ENST00000473388 KDM5DQ9BY66 1539 aa11.95□□□□□ -0.5
ATXN1-204ENST00000473388 SHANK2Q9UPX8 1470 aa11.94□□□□□ -0.5
ATXN1-204ENST00000473388 TOM1O60784 492 aa11.94□□□□□ -0.5
ATXN1-204ENST00000473388 SENP3Q9H4L4 574 aaPredicted RBP11.94□□□□□ -0.5
ATXN1-204ENST00000473388 CPS1P31327 1500 aa11.94□□□□□ -0.5
ATXN1-204ENST00000473388 PZPP20742 1482 aa11.94□□□□□ -0.5
ATXN1-204ENST00000473388 WASHC2CQ9Y4E1 1318 aa11.93□□□□□ -0.5
ATXN1-204ENST00000473388 CAMSAP2Q08AD1 1489 aa11.92□□□□□ -0.5
ATXN1-204ENST00000473388 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
ATXN1-204ENST00000473388 CEP162Q5TB80 1403 aa11.92□□□□□ -0.5
ATXN1-204ENST00000473388 ANKLE2Q86XL3 938 aa11.92□□□□□ -0.5
ATXN1-204ENST00000473388 VWDEQ8N2E2 1590 aa11.91□□□□□ -0.5
ATXN1-204ENST00000473388 UGGT1Q9NYU2 1555 aa11.91□□□□□ -0.5
ATXN1-204ENST00000473388 NPHP4O75161 1426 aaPredicted RBP11.9□□□□□ -0.5
ATXN1-204ENST00000473388 MIA2Q96PC5 1412 aa11.9□□□□□ -0.5
ATXN1-204ENST00000473388 THEMISQ8N1K5 641 aaPredicted RBP11.9□□□□□ -0.5
ATXN1-204ENST00000473388 NCOA2Q15596 1464 aa11.9□□□□□ -0.51
ATXN1-204ENST00000473388 FAM135AQ9P2D6 1515 aa11.88□□□□□ -0.51
ATXN1-204ENST00000473388 ALKQ9UM73 1620 aa11.88□□□□□ -0.51
ATXN1-204ENST00000473388 PHF23Q9BUL5 403 aaPredicted RBP11.88□□□□□ -0.51
ATXN1-204ENST00000473388 NLRP1Q9C000 1473 aa11.88□□□□□ -0.51
ATXN1-204ENST00000473388 IQGAP1P46940 1657 aa11.87□□□□□ -0.51
ATXN1-204ENST00000473388 DEPDC5O75140 1603 aa11.87□□□□□ -0.51
ATXN1-204ENST00000473388 STRCP1A6NGW2 1772 aa11.87□□□□□ -0.51
ATXN1-204ENST00000473388 MED14O60244 1454 aa11.86□□□□□ -0.51
ATXN1-204ENST00000473388 TSPY4P0CV99 314 aa11.86□□□□□ -0.51
ATXN1-204ENST00000473388 TSPY10P0CW01 314 aa11.86□□□□□ -0.51
ATXN1-204ENST00000473388 RSPH4AQ5TD94 716 aa11.85□□□□□ -0.51
ATXN1-204ENST00000473388 ARHGEF5Q12774 1597 aa11.85□□□□□ -0.51
ATXN1-204ENST00000473388 LRRC7Q96NW7 1537 aa11.84□□□□□ -0.51
ATXN1-204ENST00000473388 ABCC3O15438 1527 aa11.84□□□□□ -0.51
ATXN1-204ENST00000473388 RNF17Q9BXT8 1623 aaKnown RBP11.83□□□□□ -0.52
ATXN1-204ENST00000473388 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
ATXN1-204ENST00000473388 CEP152O94986 1710 aa11.82□□□□□ -0.52
ATXN1-204ENST00000473388 ZC3H13Q5T200 1668 aaKnown RBP11.82□□□□□ -0.52
ATXN1-204ENST00000473388 SYNMO15061 1565 aa11.82□□□□□ -0.52
ATXN1-204ENST00000473388 CFAP65Q6ZU64 1925 aaKnown RBP11.81□□□□□ -0.52
ATXN1-204ENST00000473388 MROH1Q8NDA8 1641 aa11.8□□□□□ -0.52
ATXN1-204ENST00000473388 UBR1Q8IWV7 1749 aa11.8□□□□□ -0.52
ATXN1-204ENST00000473388 MAST1Q9Y2H9 1570 aa11.8□□□□□ -0.52
ATXN1-204ENST00000473388 EIF2AK4Q9P2K8 1649 aaKnown RBP11.8□□□□□ -0.52
ATXN1-204ENST00000473388 LTKP29376 864 aa11.78□□□□□ -0.52
ATXN1-204ENST00000473388 LRRC9Q6ZRR7 1453 aa11.78□□□□□ -0.52
ATXN1-204ENST00000473388 SCAF11Q99590 1463 aaKnown RBP11.78□□□□□ -0.52
ATXN1-204ENST00000473388 TXNDC2Q86VQ3 553 aa11.77□□□□□ -0.53
ATXN1-204ENST00000473388 KANK4Q5T7N3 995 aaPredicted RBP11.76□□□□□ -0.53
ATXN1-204ENST00000473388 XIRP1Q702N8 1843 aaKnown RBP11.76□□□□□ -0.53
ATXN1-204ENST00000473388 RGS17Q9UGC6 210 aaPredicted RBP11.75□□□□□ -0.53
ATXN1-204ENST00000473388 DUOX2Q9NRD8 1548 aa11.74□□□□□ -0.53
ATXN1-204ENST00000473388 ARHGAP23Q9P227 1491 aa11.74□□□□□ -0.53
ATXN1-204ENST00000473388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.532e-6■□□□□ 11.3
ATXN1-204ENST00000473388 PIK3C2BO00750 1634 aa11.74□□□□□ -0.53
ATXN1-204ENST00000473388 SLIT1O75093 1534 aa11.74□□□□□ -0.53
ATXN1-204ENST00000473388 MYOM3Q5VTT5 1437 aa11.73□□□□□ -0.53
ATXN1-204ENST00000473388 VPS8Q8N3P4 1428 aa11.73□□□□□ -0.53
ATXN1-204ENST00000473388 RRP7BPQ9NSQ0 103 aa11.73□□□□□ -0.53
ATXN1-204ENST00000473388 EID1Q9Y6B2 187 aa11.73□□□□□ -0.53
ATXN1-204ENST00000473388 PRDM15P57071 1507 aaPredicted RBP11.72□□□□□ -0.53
ATXN1-204ENST00000473388 RBM33Q96EV2 1170 aaKnown RBP11.72□□□□□ -0.53
ATXN1-204ENST00000473388 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
ATXN1-204ENST00000473388 KIF15Q9NS87 1388 aa11.72□□□□□ -0.53
ATXN1-204ENST00000473388 ARHGAP31Q2M1Z3 1444 aa11.7□□□□□ -0.54
ATXN1-204ENST00000473388 LOC105371045A0A1W2PR82 267 aa11.7□□□□□ -0.54
ATXN1-204ENST00000473388 CROCC2H7BZ55 1655 aa11.7□□□□□ -0.54
ATXN1-204ENST00000473388 TMEM94Q12767 1356 aa11.7□□□□□ -0.54
ATXN1-204ENST00000473388 TMEM2Q9UHN6 1383 aa11.7□□□□□ -0.54
ATXN1-204ENST00000473388 ERBINQ96RT1 1412 aa11.69□□□□□ -0.54
ATXN1-204ENST00000473388 POTEAQ6S8J7 498 aa11.69□□□□□ -0.54
ATXN1-204ENST00000473388 SLC26A8Q96RN1 970 aa11.69□□□□□ -0.54
ATXN1-204ENST00000473388 ROBO1Q9Y6N7 1651 aa11.68□□□□□ -0.54
ATXN1-204ENST00000473388 ABCC5O15440 1437 aa11.68□□□□□ -0.54
ATXN1-204ENST00000473388 FAM135BQ49AJ0 1406 aa11.68□□□□□ -0.54
ATXN1-204ENST00000473388 EFCAB6Q5THR3 1501 aa11.68□□□□□ -0.54
ATXN1-204ENST00000473388 IDI1Q13907 227 aa11.67□□□□□ -0.54
ATXN1-204ENST00000473388 PROSER2Q86WR7 435 aaPredicted RBP11.67□□□□□ -0.54
ATXN1-204ENST00000473388 MAP3K1Q13233 1512 aa11.67□□□□□ -0.54
ATXN1-204ENST00000473388 PTPN23Q9H3S7 1636 aa11.67□□□□□ -0.54
ATXN1-204ENST00000473388 CHIC2Q9UKJ5 165 aa11.67□□□□□ -0.54
ATXN1-204ENST00000473388 KANK1Q14678 1352 aa11.67□□□□□ -0.54
ATXN1-204ENST00000473388 KCNA6P17658 529 aa11.66□□□□□ -0.54
ATXN1-204ENST00000473388 BCANQ96GW7 911 aa11.66□□□□□ -0.54
ATXN1-204ENST00000473388 DAPK1P53355 1430 aa11.65□□□□□ -0.54
ATXN1-204ENST00000473388 TET3O43151 1660 aa11.65□□□□□ -0.55
ATXN1-204ENST00000473388 SETD1AO15047 1707 aaKnown RBP11.64□□□□□ -0.55
ATXN1-204ENST00000473388 KDM5AP29375 1690 aaKnown RBP11.63□□□□□ -0.55
ATXN1-204ENST00000473388 ADGRB3O60242 1522 aa11.63□□□□□ -0.55
ATXN1-204ENST00000473388 LMTK2Q8IWU2 1503 aa11.63□□□□□ -0.55
ATXN1-204ENST00000473388 PHLPP1O60346 1717 aa11.62□□□□□ -0.55
ATXN1-204ENST00000473388 NWD1Q149M9 1564 aa11.62□□□□□ -0.55
ATXN1-204ENST00000473388 MSH6P52701 1360 aa11.61□□□□□ -0.55
ATXN1-204ENST00000473388 ANKRD30AQ9BXX3 1397 aa11.61□□□□□ -0.55
ATXN1-204ENST00000473388 NKTRP30414 1462 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms