RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 SHANK2Q9UPX8 1470 aa32.83■■■□□ 2.85
SREBF1-210ENST00000471445 FGD6Q6ZV73 1430 aa32.83■■■□□ 2.85
SREBF1-210ENST00000471445 PTPRKQ15262 1439 aa32.82■■■□□ 2.84
SREBF1-210ENST00000471445 DNMT1P26358 1616 aaKnown RBP32.81■■■□□ 2.84
SREBF1-210ENST00000471445 KIF3BO15066 747 aa32.8■■■□□ 2.84
SREBF1-210ENST00000471445 FBXO41Q8TF61 875 aa32.78■■■□□ 2.84
SREBF1-210ENST00000471445 ABCC5O15440 1437 aa32.76■■■□□ 2.83
SREBF1-210ENST00000471445 ZC3H13Q5T200 1668 aaKnown RBP32.75■■■□□ 2.83
SREBF1-210ENST00000471445 DUOX2Q9NRD8 1548 aa32.74■■■□□ 2.83
SREBF1-210ENST00000471445 DAPK1P53355 1430 aa32.74■■■□□ 2.83
SREBF1-210ENST00000471445 CEP170BQ9Y4F5 1589 aaPredicted RBP32.74■■■□□ 2.83
SREBF1-210ENST00000471445 MROH1Q8NDA8 1641 aa32.73■■■□□ 2.83
SREBF1-210ENST00000471445 PZPP20742 1482 aa32.72■■■□□ 2.83
SREBF1-210ENST00000471445 NCOA1Q15788 1441 aa32.7■■■□□ 2.83
SREBF1-210ENST00000471445 CAMSAP1Q5T5Y3 1602 aa32.69■■■□□ 2.82
SREBF1-210ENST00000471445 ABCC3O15438 1527 aa32.67■■■□□ 2.82
SREBF1-210ENST00000471445 KIF15Q9NS87 1388 aa32.65■■■□□ 2.82
SREBF1-210ENST00000471445 CEP152O94986 1710 aa32.64■■■□□ 2.82
SREBF1-210ENST00000471445 ERBINQ96RT1 1412 aa32.64■■■□□ 2.82
SREBF1-210ENST00000471445 PTPRTO14522 1441 aa32.63■■■□□ 2.81
SREBF1-210ENST00000471445 WASHC2CQ9Y4E1 1318 aa32.63■■■□□ 2.81
SREBF1-210ENST00000471445 PRDM15P57071 1507 aaPredicted RBP32.61■■■□□ 2.81
SREBF1-210ENST00000471445 PLA2R1Q13018 1463 aa32.61■■■□□ 2.81
SREBF1-210ENST00000471445 DMRT2Q9Y5R5 561 aa32.61■■■□□ 2.81
SREBF1-210ENST00000471445 A2ML1A8K2U0 1454 aa32.61■■■□□ 2.81
SREBF1-210ENST00000471445 DEPDC5O75140 1603 aa32.6■■■□□ 2.81
SREBF1-210ENST00000471445 TNRQ92752 1358 aa32.58■■■□□ 2.81
SREBF1-210ENST00000471445 ADGRL2O95490 1459 aa32.55■■■□□ 2.8
SREBF1-210ENST00000471445 SPATA31D1Q6ZQQ2 1576 aa32.54■■■□□ 2.8
SREBF1-210ENST00000471445 FBXO31Q5XUX0 539 aaPredicted RBP32.53■■■□□ 2.8
SREBF1-210ENST00000471445 ANKRD30AQ9BXX3 1397 aa32.52■■■□□ 2.8
SREBF1-210ENST00000471445 RRP7BPQ9NSQ0 103 aa32.51■■■□□ 2.79
SREBF1-210ENST00000471445 NLRP1Q9C000 1473 aa32.49■■■□□ 2.79
SREBF1-210ENST00000471445 POLR1AO95602 1720 aaPredicted RBP32.49■■■□□ 2.79
SREBF1-210ENST00000471445 ERVK-7P63135 1459 aa32.48■■■□□ 2.79
SREBF1-210ENST00000471445 CERKQ8TCT0 537 aa32.45■■■□□ 2.79
SREBF1-210ENST00000471445 FAM50AQ14320 339 aaKnown RBP32.44■■■□□ 2.78
SREBF1-210ENST00000471445 CHIC2Q9UKJ5 165 aa32.44■■■□□ 2.78
SREBF1-210ENST00000471445 VWDEQ8N2E2 1590 aa32.44■■■□□ 2.78
SREBF1-210ENST00000471445 LTBP4Q8N2S1 1624 aa32.44■■■□□ 2.78
SREBF1-210ENST00000471445 CFAP65Q6ZU64 1925 aaKnown RBP32.42■■■□□ 2.78
SREBF1-210ENST00000471445 PKD2Q13563 968 aa32.42■■■□□ 2.78
SREBF1-210ENST00000471445 NCKAP5LQ9HCH0 1330 aa32.42■■■□□ 2.78
SREBF1-210ENST00000471445 ARHGAP31Q2M1Z3 1444 aa32.42■■■□□ 2.78
SREBF1-210ENST00000471445 UGGT1Q9NYU2 1555 aa32.41■■■□□ 2.78
SREBF1-210ENST00000471445 LMTK2Q8IWU2 1503 aa32.4■■■□□ 2.78
SREBF1-210ENST00000471445 NEURL4Q96JN8 1562 aa32.4■■■□□ 2.78
SREBF1-210ENST00000471445 KANK1Q14678 1352 aa32.33■■■□□ 2.77
SREBF1-210ENST00000471445 UBR1Q8IWV7 1749 aa32.33■■■□□ 2.77
SREBF1-210ENST00000471445 ANKRD50Q9ULJ7 1429 aa32.32■■■□□ 2.76
SREBF1-210ENST00000471445 EFCAB6Q5THR3 1501 aa32.31■■■□□ 2.76
SREBF1-210ENST00000471445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.29■■■□□ 2.764e-7■■□□□ 14.2
SREBF1-210ENST00000471445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.29■■■□□ 2.76
SREBF1-210ENST00000471445 IQSEC2Q5JU85 1478 aa32.29■■■□□ 2.76
SREBF1-210ENST00000471445 UNC13BO14795 1591 aa32.28■■■□□ 2.76
SREBF1-210ENST00000471445 THEMISQ8N1K5 641 aaPredicted RBP32.26■■■□□ 2.75
SREBF1-210ENST00000471445 ROCK1Q13464 1354 aa32.26■■■□□ 2.75
SREBF1-210ENST00000471445 MED14O60244 1454 aa32.23■■■□□ 2.75
SREBF1-210ENST00000471445 ZNF335Q9H4Z2 1342 aaPredicted RBP32.23■■■□□ 2.75
SREBF1-210ENST00000471445 PIK3C2BO00750 1634 aa32.22■■■□□ 2.75
SREBF1-210ENST00000471445 PPARGC1BQ86YN6 1023 aaKnown RBP32.22■■■□□ 2.75
SREBF1-210ENST00000471445 TET3O43151 1660 aa32.21■■■□□ 2.75
SREBF1-210ENST00000471445 IQGAP1P46940 1657 aa32.21■■■□□ 2.75
SREBF1-210ENST00000471445 SYNMO15061 1565 aa32.21■■■□□ 2.75
SREBF1-210ENST00000471445 KDM5AP29375 1690 aaKnown RBP32.2■■■□□ 2.74
SREBF1-210ENST00000471445 GCC2Q8IWJ2 1684 aa32.19■■■□□ 2.74
SREBF1-210ENST00000471445 ANKLE2Q86XL3 938 aa32.18■■■□□ 2.74
SREBF1-210ENST00000471445 NPHP4O75161 1426 aaPredicted RBP32.17■■■□□ 2.74
SREBF1-210ENST00000471445 NOS1P29475 1434 aa32.17■■■□□ 2.74
SREBF1-210ENST00000471445 SLIT1O75093 1534 aa32.16■■■□□ 2.74
SREBF1-210ENST00000471445 RRBP1Q9P2E9 1410 aaKnown RBP32.16■■■□□ 2.74
SREBF1-210ENST00000471445 RPRD2Q5VT52 1461 aaKnown RBP32.16■■■□□ 2.74
SREBF1-210ENST00000471445 ARHGAP23Q9P227 1491 aa32.16■■■□□ 2.74
SREBF1-210ENST00000471445 IQGAP3Q86VI3 1631 aa32.12■■■□□ 2.73
SREBF1-210ENST00000471445 SCAF11Q99590 1463 aaKnown RBP32.1■■■□□ 2.73
SREBF1-210ENST00000471445 CPS1P31327 1500 aa32.1■■■□□ 2.73
SREBF1-210ENST00000471445 ADGRB3O60242 1522 aa32.07■■■□□ 2.72
SREBF1-210ENST00000471445 E9PCH4 1651 aa32.07■■■□□ 2.72
SREBF1-210ENST00000471445 ITGAEP38570 1179 aa32.05■■■□□ 2.72
SREBF1-210ENST00000471445 STRCP1A6NGW2 1772 aa32.02■■■□□ 2.72
SREBF1-210ENST00000471445 TMEM2Q9UHN6 1383 aa32■■■□□ 2.71
SREBF1-210ENST00000471445 IDI1Q13907 227 aa32■■■□□ 2.71
SREBF1-210ENST00000471445 MYO5BQ9ULV0 1848 aa31.99■■■□□ 2.71
SREBF1-210ENST00000471445 LTKP29376 864 aa31.96■■■□□ 2.71
SREBF1-210ENST00000471445 SLC52A1Q9NWF4 448 aa31.95■■■□□ 2.71
SREBF1-210ENST00000471445 STAG3Q9UJ98 1225 aa31.94■■■□□ 2.7
SREBF1-210ENST00000471445 TXNDC2Q86VQ3 553 aa31.93■■■□□ 2.7
SREBF1-210ENST00000471445 TMEM131LA2VDJ0 1609 aa31.93■■■□□ 2.7
SREBF1-210ENST00000471445 NUP155O75694 1391 aa31.92■■■□□ 2.7
SREBF1-210ENST00000471445 EID1Q9Y6B2 187 aa31.9■■■□□ 2.7
SREBF1-210ENST00000471445 NAIPQ13075 1403 aa31.88■■■□□ 2.69
SREBF1-210ENST00000471445 SPHKAPQ2M3C7 1700 aa31.86■■■□□ 2.69
SREBF1-210ENST00000471445 LRRC7Q96NW7 1537 aa31.85■■■□□ 2.69
SREBF1-210ENST00000471445 ZFYVE9O95405 1425 aa31.84■■■□□ 2.69
SREBF1-210ENST00000471445 UBAP1LF5GYI3 381 aa31.84■■■□□ 2.69
SREBF1-210ENST00000471445 HFM1A2PYH4 1435 aa31.81■■■□□ 2.68
SREBF1-210ENST00000471445 ALKQ9UM73 1620 aa31.8■■■□□ 2.68
SREBF1-210ENST00000471445 XIRP1Q702N8 1843 aaKnown RBP31.79■■■□□ 2.68
SREBF1-210ENST00000471445 RIMS2Q9UQ26 1411 aa31.75■■■□□ 2.67
SREBF1-210ENST00000471445 NWD1Q149M9 1564 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms