RNA–Protein interactions for RNA: ENST00000471308.5

PCBP4-208, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-208ENST00000471308 HNRNPUQ00839 825 aaKnown RBP eCLIP23.35■■□□□ 1.33
PCBP4-208ENST00000471308 EFCAB2Q5VUJ9 269 aa23.35■■□□□ 1.33
PCBP4-208ENST00000471308 TRPM1Q7Z4N2 1603 aa23.33■■□□□ 1.33
PCBP4-208ENST00000471308 FKBP8Q14318 412 aa23.32■■□□□ 1.32
PCBP4-208ENST00000471308 CARD11Q9BXL7 1154 aa23.31■■□□□ 1.32
PCBP4-208ENST00000471308 ATP10AO60312 1499 aa23.31■■□□□ 1.32
PCBP4-208ENST00000471308 DHX29Q7Z478 1369 aaKnown RBP23.3■■□□□ 1.32
PCBP4-208ENST00000471308 LAMC1P11047 1609 aa23.3■■□□□ 1.32
PCBP4-208ENST00000471308 DCAF11Q8TEB1 546 aa23.29■■□□□ 1.32
PCBP4-208ENST00000471308 PLA2R1Q13018 1463 aa23.29■■□□□ 1.32
PCBP4-208ENST00000471308 PRAG1Q86YV5 1406 aa23.28■■□□□ 1.32
PCBP4-208ENST00000471308 EIF2AK4Q9P2K8 1649 aaKnown RBP23.28■■□□□ 1.32
PCBP4-208ENST00000471308 RTEL1-TNFRSF6BF6WH68 1400 aa23.27■■□□□ 1.32
PCBP4-208ENST00000471308 MRS2Q9HD23 443 aa23.27■■□□□ 1.32
PCBP4-208ENST00000471308 WDR7Q9Y4E6 1490 aa23.25■■□□□ 1.31
PCBP4-208ENST00000471308 ABCA9Q8IUA7 1624 aa23.25■■□□□ 1.31
PCBP4-208ENST00000471308 ZFYVE16Q7Z3T8 1539 aa23.25■■□□□ 1.31
PCBP4-208ENST00000471308 TRAPPC8Q9Y2L5 1435 aa23.24■■□□□ 1.31
PCBP4-208ENST00000471308 E9PCH4 1651 aa23.24■■□□□ 1.31
PCBP4-208ENST00000471308 CCDC184Q52MB2 194 aa23.24■■□□□ 1.31
PCBP4-208ENST00000471308 KDM2AQ9Y2K7 1162 aa23.24■■□□□ 1.31
PCBP4-208ENST00000471308 A2MP01023 1474 aa23.23■■□□□ 1.31
PCBP4-208ENST00000471308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.22■■□□□ 1.31
PCBP4-208ENST00000471308 GPRASP1Q5JY77 1395 aa23.21■■□□□ 1.31
PCBP4-208ENST00000471308 DEPDC5O75140 1603 aa23.2■■□□□ 1.31
PCBP4-208ENST00000471308 ZBED9Q6R2W3 1325 aa23.19■■□□□ 1.3
PCBP4-208ENST00000471308 INO80Q9ULG1 1556 aaPredicted RBP23.18■■□□□ 1.3
PCBP4-208ENST00000471308 PRDM15P57071 1507 aaPredicted RBP23.18■■□□□ 1.3
PCBP4-208ENST00000471308 SPAG9O60271 1321 aaKnown RBP23.18■■□□□ 1.3
PCBP4-208ENST00000471308 ST20-MTHFSA0A0A6YYL1 179 aa23.17■■□□□ 1.3
PCBP4-208ENST00000471308 FAM9BQ8IZU0 186 aa23.17■■□□□ 1.3
PCBP4-208ENST00000471308 POLR3GLQ9BT43 218 aa23.17■■□□□ 1.3
PCBP4-208ENST00000471308 KTN1Q86UP2 1357 aaKnown RBP23.16■■□□□ 1.3
PCBP4-208ENST00000471308 BCANQ96GW7 911 aa23.16■■□□□ 1.3
PCBP4-208ENST00000471308 FANCAO15360 1455 aa23.15■■□□□ 1.3
PCBP4-208ENST00000471308 RNF17Q9BXT8 1623 aaKnown RBP23.15■■□□□ 1.3
PCBP4-208ENST00000471308 ATP7AQ04656 1500 aa23.14■■□□□ 1.3
PCBP4-208ENST00000471308 SPHKAPQ2M3C7 1700 aa23.14■■□□□ 1.29
PCBP4-208ENST00000471308 TET3O43151 1660 aa23.13■■□□□ 1.29
PCBP4-208ENST00000471308 TRPM2O94759 1503 aa23.13■■□□□ 1.29
PCBP4-208ENST00000471308 CEP152O94986 1710 aa23.13■■□□□ 1.29
PCBP4-208ENST00000471308 RGL3Q3MIN7 710 aa23.1■■□□□ 1.29
PCBP4-208ENST00000471308 VWDEQ8N2E2 1590 aa23.09■■□□□ 1.29
PCBP4-208ENST00000471308 COL17A1Q9UMD9 1497 aaPredicted RBP23.08■■□□□ 1.29
PCBP4-208ENST00000471308 ERICH6BQ5W0A0 696 aa23.07■■□□□ 1.28
PCBP4-208ENST00000471308 TSHZ2Q9NRE2 1034 aa23.07■■□□□ 1.28
PCBP4-208ENST00000471308 ADGRL1O94910 1474 aa23.07■■□□□ 1.28
PCBP4-208ENST00000471308 AFAP1Q8N556 730 aa23.06■■□□□ 1.28
PCBP4-208ENST00000471308 MADDQ8WXG6 1647 aa23.06■■□□□ 1.28
PCBP4-208ENST00000471308 PTPRTO14522 1441 aa23.06■■□□□ 1.28
PCBP4-208ENST00000471308 ASXL2Q76L83 1435 aa23.05■■□□□ 1.28
PCBP4-208ENST00000471308 KANK1Q14678 1352 aa23.04■■□□□ 1.28
PCBP4-208ENST00000471308 RALBP1Q15311 655 aa23.04■■□□□ 1.28
PCBP4-208ENST00000471308 NEURL4Q96JN8 1562 aa23.04■■□□□ 1.28
PCBP4-208ENST00000471308 CLTCL1P53675 1640 aa23.03■■□□□ 1.28
PCBP4-208ENST00000471308 BRD4O60885 1362 aaPredicted RBP23.02■■□□□ 1.28
PCBP4-208ENST00000471308 NBPF1Q3BBV0 1214 aa23.02■■□□□ 1.28
PCBP4-208ENST00000471308 STAC3Q96MF2 364 aa23.02■■□□□ 1.28
PCBP4-208ENST00000471308 CFAP74Q9C0B2 1584 aa23.02■■□□□ 1.27
PCBP4-208ENST00000471308 MYBBP1AQ9BQG0 1328 aaKnown RBP23.01■■□□□ 1.27
PCBP4-208ENST00000471308 SCAPERQ9BY12 1400 aa23.01■■□□□ 1.27
PCBP4-208ENST00000471308 IQGAP1P46940 1657 aa23.01■■□□□ 1.27
PCBP4-208ENST00000471308 MROH1Q8NDA8 1641 aa22.99■■□□□ 1.27
PCBP4-208ENST00000471308 TMC1Q8TDI8 760 aa22.98■■□□□ 1.27
PCBP4-208ENST00000471308 SMG6Q86US8 1419 aaKnown RBP22.97■■□□□ 1.27
PCBP4-208ENST00000471308 KIDINS220Q9ULH0 1771 aa22.97■■□□□ 1.27
PCBP4-208ENST00000471308 KIAA1210Q9ULL0 1709 aa22.96■■□□□ 1.27
PCBP4-208ENST00000471308 PNISRQ8TF01 805 aaKnown RBP22.96■■□□□ 1.27
PCBP4-208ENST00000471308 TESK2Q96S53 571 aa22.96■■□□□ 1.27
PCBP4-208ENST00000471308 ZNF518AQ6AHZ1 1483 aa22.96■■□□□ 1.27
PCBP4-208ENST00000471308 WASHC2CQ9Y4E1 1318 aa22.95■■□□□ 1.26
PCBP4-208ENST00000471308 LRPPRCP42704 1394 aaKnown RBP22.95■■□□□ 1.26
PCBP4-208ENST00000471308 PARD3Q8TEW0 1356 aa22.95■■□□□ 1.26
PCBP4-208ENST00000471308 DISP3Q9P2K9 1392 aa22.94■■□□□ 1.26
PCBP4-208ENST00000471308 CNGB1Q14028 1251 aaPredicted RBP22.93■■□□□ 1.26
PCBP4-208ENST00000471308 EFCAB6Q5THR3 1501 aa22.93■■□□□ 1.26
PCBP4-208ENST00000471308 TMF1P82094 1093 aa22.93■■□□□ 1.26
PCBP4-208ENST00000471308 KIF1BO60333 1816 aa22.91■■□□□ 1.26
PCBP4-208ENST00000471308 LMTK2Q8IWU2 1503 aa22.9■■□□□ 1.26
PCBP4-208ENST00000471308 KIF3BO15066 747 aa22.89■■□□□ 1.26
PCBP4-208ENST00000471308 NPM1P06748 294 aaKnown RBP eCLIP22.89■■□□□ 1.26
PCBP4-208ENST00000471308 NLRP13Q86W25 1043 aa22.89■■□□□ 1.26
PCBP4-208ENST00000471308 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
PCBP4-208ENST00000471308 SCAF11Q99590 1463 aaKnown RBP22.88■■□□□ 1.25
PCBP4-208ENST00000471308 PER1O15534 1290 aaPredicted RBP22.88■■□□□ 1.25
PCBP4-208ENST00000471308 MYT1LQ9UL68 1186 aa22.88■■□□□ 1.25
PCBP4-208ENST00000471308 NUDCQ9Y266 331 aa22.88■■□□□ 1.25
PCBP4-208ENST00000471308 PPP4R2Q9NY27 417 aa22.87■■□□□ 1.25
PCBP4-208ENST00000471308 MYOM2P54296 1465 aa22.87■■□□□ 1.25
PCBP4-208ENST00000471308 IRX6P78412 446 aaPredicted RBP22.86■■□□□ 1.25
PCBP4-208ENST00000471308 IFT172Q9UG01 1749 aa22.86■■□□□ 1.25
PCBP4-208ENST00000471308 PPRC1Q5VV67 1664 aaKnown RBP22.86■■□□□ 1.25
PCBP4-208ENST00000471308 ZMYM4Q5VZL5 1548 aa22.85■■□□□ 1.25
PCBP4-208ENST00000471308 MAP3K4Q9Y6R4 1608 aa22.85■■□□□ 1.25
PCBP4-208ENST00000471308 POGZQ7Z3K3 1410 aa22.84■■□□□ 1.25
PCBP4-208ENST00000471308 SYNMO15061 1565 aa22.84■■□□□ 1.25
PCBP4-208ENST00000471308 HECW2Q9P2P5 1572 aa22.84■■□□□ 1.25
PCBP4-208ENST00000471308 EIF3AQ14152 1382 aaKnown RBP22.83■■□□□ 1.25
PCBP4-208ENST00000471308 INSRP06213 1382 aa22.83■■□□□ 1.24
PCBP4-208ENST00000471308 MLH3Q9UHC1 1453 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms