RNA–Protein interactions for RNA: ENST00000471308.5

PCBP4-208, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-208ENST00000471308 NISCHQ9Y2I1 1504 aa36.24■■■■□ 3.39
PCBP4-208ENST00000471308 CCDC180Q9P1Z9 1646 aa31.25■■■□□ 2.59
PCBP4-208ENST00000471308 ZCCHC6Q5VYS8 1495 aaKnown RBP30.64■■■□□ 2.49
PCBP4-208ENST00000471308 SHROOM4Q9ULL8 1493 aa30.2■■■□□ 2.42
PCBP4-208ENST00000471308 DCAF1Q9Y4B6 1507 aa29.97■■■□□ 2.39
PCBP4-208ENST00000471308 DCAF8L2P0C7V8 631 aa29.63■■■□□ 2.33
PCBP4-208ENST00000471308 SUPT5HO00267 1087 aaKnown RBP29.46■■■□□ 2.31
PCBP4-208ENST00000471308 MYO15BQ96JP2 1530 aa29.28■■■□□ 2.28
PCBP4-208ENST00000471308 ABCC9O60706 1549 aa28.89■■■□□ 2.21
PCBP4-208ENST00000471308 SCRIBQ14160 1630 aa28.86■■■□□ 2.21
PCBP4-208ENST00000471308 NACADO15069 1562 aa28.86■■■□□ 2.21
PCBP4-208ENST00000471308 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
PCBP4-208ENST00000471308 RSF1Q96T23 1441 aaPredicted RBP28.43■■■□□ 2.14
PCBP4-208ENST00000471308 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
PCBP4-208ENST00000471308 CECR2Q9BXF3 1484 aa28.09■■■□□ 2.09
PCBP4-208ENST00000471308 MROH2BQ7Z745 1585 aa28.04■■■□□ 2.08
PCBP4-208ENST00000471308 UNC13AQ9UPW8 1703 aa27.96■■■□□ 2.07
PCBP4-208ENST00000471308 BAZ1AQ9NRL2 1556 aaPredicted RBP27.94■■■□□ 2.06
PCBP4-208ENST00000471308 WIZO95785 1651 aa27.9■■■□□ 2.06
PCBP4-208ENST00000471308 SMARCA4P51532 1647 aa27.72■■■□□ 2.03
PCBP4-208ENST00000471308 TRIM41Q8WV44 630 aa27.63■■■□□ 2.01
PCBP4-208ENST00000471308 TOP2AP11388 1531 aaKnown RBP27.61■■■□□ 2.01
PCBP4-208ENST00000471308 LOC105371045A0A1W2PR82 267 aa27.58■■■□□ 2.01
PCBP4-208ENST00000471308 BICRAQ9NZM4 1560 aa27.54■■■□□ 2
PCBP4-208ENST00000471308 EIF4G1Q04637 1599 aaKnown RBP27.54■■■□□ 2
PCBP4-208ENST00000471308 SMARCA2P51531 1590 aa27.38■■□□□ 1.97
PCBP4-208ENST00000471308 PEG3Q9GZU2 1588 aa27.32■■□□□ 1.96
PCBP4-208ENST00000471308 CCDC88BA6NC98 1476 aa27.32■■□□□ 1.96
PCBP4-208ENST00000471308 PCGF6Q9BYE7 350 aa27.28■■□□□ 1.96
PCBP4-208ENST00000471308 PABPN1Q86U42 306 aaKnown RBP eCLIP27.23■■□□□ 1.95
PCBP4-208ENST00000471308 HRCP23327 699 aa27.21■■□□□ 1.95
PCBP4-208ENST00000471308 FAM9AQ8IZU1 332 aaPredicted RBP27.16■■□□□ 1.94
PCBP4-208ENST00000471308 ABCC8Q09428 1581 aa27.06■■□□□ 1.92
PCBP4-208ENST00000471308 TRIM26Q12899 539 aaPredicted RBP27.05■■□□□ 1.92
PCBP4-208ENST00000471308 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
PCBP4-208ENST00000471308 BAZ1BQ9UIG0 1483 aaKnown RBP26.92■■□□□ 1.9
PCBP4-208ENST00000471308 EEA1Q15075 1411 aa26.85■■□□□ 1.89
PCBP4-208ENST00000471308 WRNQ14191 1432 aaPredicted RBP eCLIP26.76■■□□□ 1.87
PCBP4-208ENST00000471308 EHMT2Q96KQ7 1210 aa26.75■■□□□ 1.87
PCBP4-208ENST00000471308 SOGA1O94964 1423 aa26.7■■□□□ 1.86
PCBP4-208ENST00000471308 HMGXB3Q12766 1538 aa26.69■■□□□ 1.86
PCBP4-208ENST00000471308 SYNJ1O43426 1573 aa26.65■■□□□ 1.86
PCBP4-208ENST00000471308 NCAPD3P42695 1498 aa26.6■■□□□ 1.85
PCBP4-208ENST00000471308 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.85
PCBP4-208ENST00000471308 CSRNP3Q8WYN3 585 aa26.56■■□□□ 1.84
PCBP4-208ENST00000471308 RUSC2Q8N2Y8 1516 aa26.55■■□□□ 1.84
PCBP4-208ENST00000471308 CEP162Q5TB80 1403 aa26.53■■□□□ 1.84
PCBP4-208ENST00000471308 GOLGA3Q08378 1498 aa26.53■■□□□ 1.84
PCBP4-208ENST00000471308 KIF21BO75037 1637 aa26.49■■□□□ 1.83
PCBP4-208ENST00000471308 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
PCBP4-208ENST00000471308 ZEB1P37275 1124 aaPredicted RBP26.45■■□□□ 1.83
PCBP4-208ENST00000471308 BIVM-ERCC5R4GMW8 1640 aa26.44■■□□□ 1.82
PCBP4-208ENST00000471308 CEP164Q9UPV0 1460 aa26.43■■□□□ 1.82
PCBP4-208ENST00000471308 PPARGC1BQ86YN6 1023 aaKnown RBP26.42■■□□□ 1.82
PCBP4-208ENST00000471308 UBTFP17480 764 aaKnown RBP26.33■■□□□ 1.81
PCBP4-208ENST00000471308 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
PCBP4-208ENST00000471308 CFTRP13569 1480 aa26.27■■□□□ 1.8
PCBP4-208ENST00000471308 CUX1P39880 1505 aa26.17■■□□□ 1.78
PCBP4-208ENST00000471308 ERICH3Q5RHP9 1530 aa26.13■■□□□ 1.77
PCBP4-208ENST00000471308 RAPGEF2Q9Y4G8 1499 aa26.13■■□□□ 1.77
PCBP4-208ENST00000471308 CLIP1P30622 1438 aa26.12■■□□□ 1.77
PCBP4-208ENST00000471308 CC2D2AQ9P2K1 1620 aa26.05■■□□□ 1.76
PCBP4-208ENST00000471308 PRXQ9BXM0 1461 aa26.04■■□□□ 1.76
PCBP4-208ENST00000471308 VPS8Q8N3P4 1428 aa26.03■■□□□ 1.76
PCBP4-208ENST00000471308 KIF27Q86VH2 1401 aa26■■□□□ 1.75
PCBP4-208ENST00000471308 CADPSQ9ULU8 1353 aa25.98■■□□□ 1.75
PCBP4-208ENST00000471308 TTBK1Q5TCY1 1321 aaPredicted RBP25.87■■□□□ 1.73
PCBP4-208ENST00000471308 CCER1Q8TC90 406 aaPredicted RBP25.85■■□□□ 1.73
PCBP4-208ENST00000471308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.83■■□□□ 1.73
PCBP4-208ENST00000471308 APLP2Q06481 763 aa25.78■■□□□ 1.72
PCBP4-208ENST00000471308 ARAP1Q96P48 1450 aa25.76■■□□□ 1.71
PCBP4-208ENST00000471308 FGD5Q6ZNL6 1462 aa25.75■■□□□ 1.71
PCBP4-208ENST00000471308 CUX2O14529 1486 aa25.74■■□□□ 1.71
PCBP4-208ENST00000471308 FANCD2Q9BXW9 1451 aa25.73■■□□□ 1.71
PCBP4-208ENST00000471308 DNMBPQ6XZF7 1577 aa25.68■■□□□ 1.7
PCBP4-208ENST00000471308 IGF1RP08069 1367 aa25.65■■□□□ 1.7
PCBP4-208ENST00000471308 RANGAP1P46060 587 aaPredicted RBP25.64■■□□□ 1.7
PCBP4-208ENST00000471308 LAMC3Q9Y6N6 1575 aa25.6■■□□□ 1.69
PCBP4-208ENST00000471308 ARHGAP35Q9NRY4 1499 aa25.59■■□□□ 1.69
PCBP4-208ENST00000471308 TOPBP1Q92547 1522 aa25.55■■□□□ 1.68
PCBP4-208ENST00000471308 CARMIL1Q5VZK9 1371 aa25.55■■□□□ 1.68
PCBP4-208ENST00000471308 ABCA10Q8WWZ4 1543 aa25.54■■□□□ 1.68
PCBP4-208ENST00000471308 NESP48681 1621 aa25.5■■□□□ 1.67
PCBP4-208ENST00000471308 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
PCBP4-208ENST00000471308 CUL7Q14999 1698 aa25.47■■□□□ 1.67
PCBP4-208ENST00000471308 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.66
PCBP4-208ENST00000471308 WDR97A6NE52 1622 aa25.43■■□□□ 1.66
PCBP4-208ENST00000471308 MAP3K1Q13233 1512 aa25.42■■□□□ 1.66
PCBP4-208ENST00000471308 RAD54L2Q9Y4B4 1467 aa25.41■■□□□ 1.66
PCBP4-208ENST00000471308 RRBP1Q9P2E9 1410 aaKnown RBP25.39■■□□□ 1.65
PCBP4-208ENST00000471308 URB2Q14146 1524 aaKnown RBP25.36■■□□□ 1.65
PCBP4-208ENST00000471308 KANK4Q5T7N3 995 aaPredicted RBP25.35■■□□□ 1.65
PCBP4-208ENST00000471308 PDS5BQ9NTI5 1447 aa25.34■■□□□ 1.65
PCBP4-208ENST00000471308 TIAM1Q13009 1591 aa25.34■■□□□ 1.65
PCBP4-208ENST00000471308 CTTNBP2Q8WZ74 1663 aa25.34■■□□□ 1.65
PCBP4-208ENST00000471308 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
PCBP4-208ENST00000471308 EFCAB5A4FU69 1503 aa25.32■■□□□ 1.64
PCBP4-208ENST00000471308 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
PCBP4-208ENST00000471308 CFAP43Q8NDM7 1665 aa25.28■■□□□ 1.64
PCBP4-208ENST00000471308 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms