RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 KDM5DQ9BY66 1539 aa21.28■■□□□ 1
ABCA4-204ENST00000470771 CAMSAP1Q5T5Y3 1602 aa21.27■■□□□ 1
ABCA4-204ENST00000470771 FBXO31Q5XUX0 539 aaPredicted RBP21.27■■□□□ 1
ABCA4-204ENST00000470771 MAST1Q9Y2H9 1570 aa21.27■□□□□ 0.99
ABCA4-204ENST00000470771 NCKAP5LQ9HCH0 1330 aa21.27■□□□□ 0.99
ABCA4-204ENST00000470771 TNRQ92752 1358 aa21.26■□□□□ 0.99
ABCA4-204ENST00000470771 PZPP20742 1482 aa21.24■□□□□ 0.99
ABCA4-204ENST00000470771 RRP7BPQ9NSQ0 103 aa21.23■□□□□ 0.99
ABCA4-204ENST00000470771 PLA2R1Q13018 1463 aa21.23■□□□□ 0.99
ABCA4-204ENST00000470771 CEP170BQ9Y4F5 1589 aaPredicted RBP21.23■□□□□ 0.99
ABCA4-204ENST00000470771 MYO3AQ8NEV4 1616 aa21.22■□□□□ 0.99
ABCA4-204ENST00000470771 A2ML1A8K2U0 1454 aa21.22■□□□□ 0.99
ABCA4-204ENST00000470771 THEMISQ8N1K5 641 aaPredicted RBP21.22■□□□□ 0.99
ABCA4-204ENST00000470771 KIF15Q9NS87 1388 aa21.21■□□□□ 0.99
ABCA4-204ENST00000470771 FGD6Q6ZV73 1430 aa21.21■□□□□ 0.99
ABCA4-204ENST00000470771 DUOX2Q9NRD8 1548 aa21.2■□□□□ 0.98
ABCA4-204ENST00000470771 ABCC5O15440 1437 aa21.2■□□□□ 0.98
ABCA4-204ENST00000470771 PTPN23Q9H3S7 1636 aa21.19■□□□□ 0.98
ABCA4-204ENST00000470771 SHANK2Q9UPX8 1470 aa21.19■□□□□ 0.98
ABCA4-204ENST00000470771 ZNF142P52746 1687 aaPredicted RBP21.18■□□□□ 0.98
ABCA4-204ENST00000470771 ANKLE2Q86XL3 938 aa21.17■□□□□ 0.98
ABCA4-204ENST00000470771 ANKRD30AQ9BXX3 1397 aa21.17■□□□□ 0.98
ABCA4-204ENST00000470771 EIF2AK4Q9P2K8 1649 aaKnown RBP21.17■□□□□ 0.98
ABCA4-204ENST00000470771 DAPK1P53355 1430 aa21.16■□□□□ 0.98
ABCA4-204ENST00000470771 CHIC2Q9UKJ5 165 aa21.16■□□□□ 0.98
ABCA4-204ENST00000470771 RNF17Q9BXT8 1623 aaKnown RBP21.15■□□□□ 0.98
ABCA4-204ENST00000470771 TCOF1Q13428 1488 aaKnown RBP21.15■□□□□ 0.98
ABCA4-204ENST00000470771 NLRP1Q9C000 1473 aa21.15■□□□□ 0.98
ABCA4-204ENST00000470771 FAM50AQ14320 339 aaKnown RBP21.15■□□□□ 0.98
ABCA4-204ENST00000470771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.15■□□□□ 0.98
ABCA4-204ENST00000470771 ERBINQ96RT1 1412 aa21.14■□□□□ 0.98
ABCA4-204ENST00000470771 KANK1Q14678 1352 aa21.14■□□□□ 0.98
ABCA4-204ENST00000470771 DNMT1P26358 1616 aaKnown RBP21.13■□□□□ 0.97
ABCA4-204ENST00000470771 ABCC3O15438 1527 aa21.13■□□□□ 0.97
ABCA4-204ENST00000470771 ZC3H13Q5T200 1668 aaKnown RBP21.12■□□□□ 0.97
ABCA4-204ENST00000470771 ZNF335Q9H4Z2 1342 aaPredicted RBP21.1■□□□□ 0.97
ABCA4-204ENST00000470771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.1■□□□□ 0.97
ABCA4-204ENST00000470771 IQSEC2Q5JU85 1478 aa21.09■□□□□ 0.97
ABCA4-204ENST00000470771 LTBP4Q8N2S1 1624 aa21.08■□□□□ 0.97
ABCA4-204ENST00000470771 UGGT1Q9NYU2 1555 aa21.08■□□□□ 0.97
ABCA4-204ENST00000470771 CROCC2H7BZ55 1655 aa21.07■□□□□ 0.96
ABCA4-204ENST00000470771 ARHGAP31Q2M1Z3 1444 aa21.05■□□□□ 0.96
ABCA4-204ENST00000470771 ERVK-7P63135 1459 aa21.05■□□□□ 0.96
ABCA4-204ENST00000470771 SPATA31D1Q6ZQQ2 1576 aa21.04■□□□□ 0.96
ABCA4-204ENST00000470771 MROH1Q8NDA8 1641 aa21.03■□□□□ 0.96
ABCA4-204ENST00000470771 UBAP1LF5GYI3 381 aa21.02■□□□□ 0.96
ABCA4-204ENST00000470771 STAG3Q9UJ98 1225 aa21.02■□□□□ 0.96
ABCA4-204ENST00000470771 PRDM15P57071 1507 aaPredicted RBP21.02■□□□□ 0.96
ABCA4-204ENST00000470771 EID1Q9Y6B2 187 aa21■□□□□ 0.95
ABCA4-204ENST00000470771 NPHP4O75161 1426 aaPredicted RBP20.99■□□□□ 0.95
ABCA4-204ENST00000470771 ADGRL2O95490 1459 aa20.99■□□□□ 0.95
ABCA4-204ENST00000470771 MED14O60244 1454 aa20.98■□□□□ 0.95
ABCA4-204ENST00000470771 CEP152O94986 1710 aa20.98■□□□□ 0.95
ABCA4-204ENST00000470771 POLR1AO95602 1720 aaPredicted RBP20.98■□□□□ 0.95
ABCA4-204ENST00000470771 ANKRD50Q9ULJ7 1429 aa20.97■□□□□ 0.95
ABCA4-204ENST00000470771 TXNDC2Q86VQ3 553 aa20.97■□□□□ 0.95
ABCA4-204ENST00000470771 DEPDC5O75140 1603 aa20.96■□□□□ 0.95
ABCA4-204ENST00000470771 CFAP65Q6ZU64 1925 aaKnown RBP20.96■□□□□ 0.95
ABCA4-204ENST00000470771 CPS1P31327 1500 aa20.94■□□□□ 0.94
ABCA4-204ENST00000470771 NEURL4Q96JN8 1562 aa20.94■□□□□ 0.94
ABCA4-204ENST00000470771 TOM1O60784 492 aa20.94■□□□□ 0.94
ABCA4-204ENST00000470771 LMTK2Q8IWU2 1503 aa20.94■□□□□ 0.94
ABCA4-204ENST00000470771 SLC52A1Q9NWF4 448 aa20.93■□□□□ 0.94
ABCA4-204ENST00000470771 IDI1Q13907 227 aa20.92■□□□□ 0.94
ABCA4-204ENST00000470771 PPARGC1BQ86YN6 1023 aaKnown RBP20.91■□□□□ 0.94
ABCA4-204ENST00000470771 ROCK1Q13464 1354 aa20.9■□□□□ 0.94
ABCA4-204ENST00000470771 ITGAEP38570 1179 aa20.9■□□□□ 0.94
ABCA4-204ENST00000470771 SCAF11Q99590 1463 aaKnown RBP20.89■□□□□ 0.94
ABCA4-204ENST00000470771 LTKP29376 864 aa20.88■□□□□ 0.93
ABCA4-204ENST00000470771 VWDEQ8N2E2 1590 aa20.88■□□□□ 0.93
ABCA4-204ENST00000470771 TMEM2Q9UHN6 1383 aa20.87■□□□□ 0.93
ABCA4-204ENST00000470771 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
ABCA4-204ENST00000470771 HDGFP51858 240 aaKnown RBP20.87■□□□□ 0.93
ABCA4-204ENST00000470771 UBR1Q8IWV7 1749 aa20.87■□□□□ 0.93
ABCA4-204ENST00000470771 IQGAP1P46940 1657 aa20.86■□□□□ 0.93
ABCA4-204ENST00000470771 SLIT1O75093 1534 aa20.86■□□□□ 0.93
ABCA4-204ENST00000470771 RPRD2Q5VT52 1461 aaKnown RBP20.86■□□□□ 0.93
ABCA4-204ENST00000470771 PIP4K2BP78356 416 aa20.85■□□□□ 0.93
ABCA4-204ENST00000470771 EFCAB6Q5THR3 1501 aa20.84■□□□□ 0.93
ABCA4-204ENST00000470771 ARHGAP23Q9P227 1491 aa20.84■□□□□ 0.93
ABCA4-204ENST00000470771 NOS1P29475 1434 aa20.84■□□□□ 0.93
ABCA4-204ENST00000470771 DISP3Q9P2K9 1392 aa20.83■□□□□ 0.92
ABCA4-204ENST00000470771 BCANQ96GW7 911 aa20.82■□□□□ 0.92
ABCA4-204ENST00000470771 PIK3C2BO00750 1634 aa20.8■□□□□ 0.92
ABCA4-204ENST00000470771 NUP155O75694 1391 aa20.79■□□□□ 0.92
ABCA4-204ENST00000470771 KDM5AP29375 1690 aaKnown RBP20.79■□□□□ 0.92
ABCA4-204ENST00000470771 SYNMO15061 1565 aa20.76■□□□□ 0.91
ABCA4-204ENST00000470771 PPP1R15AO75807 674 aaPredicted RBP20.76■□□□□ 0.91
ABCA4-204ENST00000470771 TET3O43151 1660 aa20.75■□□□□ 0.91
ABCA4-204ENST00000470771 CHGAP10645 457 aaKnown RBP20.75■□□□□ 0.91
ABCA4-204ENST00000470771 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.75■□□□□ 0.91
ABCA4-204ENST00000470771 LRRC7Q96NW7 1537 aa20.74■□□□□ 0.91
ABCA4-204ENST00000470771 SLC26A8Q96RN1 970 aa20.74■□□□□ 0.91
ABCA4-204ENST00000470771 UNC13BO14795 1591 aa20.73■□□□□ 0.91
ABCA4-204ENST00000470771 KCNA6P17658 529 aa20.73■□□□□ 0.91
ABCA4-204ENST00000470771 HSPA1LP34931 641 aa20.73■□□□□ 0.91
ABCA4-204ENST00000470771 ADGRB3O60242 1522 aa20.73■□□□□ 0.91
ABCA4-204ENST00000470771 GCC2Q8IWJ2 1684 aa20.7■□□□□ 0.9
ABCA4-204ENST00000470771 PROSER2Q86WR7 435 aaPredicted RBP20.69■□□□□ 0.9
ABCA4-204ENST00000470771 RRBP1Q9P2E9 1410 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms