RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 NISCHQ9Y2I1 1504 aa33.66■■■□□ 2.98
ABCA4-204ENST00000470771 CCDC180Q9P1Z9 1646 aa30.06■■■□□ 2.4
ABCA4-204ENST00000470771 ABCC9O60706 1549 aa29.91■■■□□ 2.38
ABCA4-204ENST00000470771 RB1CC1Q8TDY2 1594 aa28.59■■■□□ 2.17
ABCA4-204ENST00000470771 DCAF8L2P0C7V8 631 aa28.52■■■□□ 2.16
ABCA4-204ENST00000470771 NACADO15069 1562 aa28.45■■■□□ 2.15
ABCA4-204ENST00000470771 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
ABCA4-204ENST00000470771 PABPN1Q86U42 306 aaKnown RBP eCLIP27.96■■■□□ 2.07
ABCA4-204ENST00000470771 ZCCHC6Q5VYS8 1495 aaKnown RBP27.89■■■□□ 2.05
ABCA4-204ENST00000470771 DNAJC5BQ9UF47 199 aa27.88■■■□□ 2.05
ABCA4-204ENST00000470771 DCAF1Q9Y4B6 1507 aa27.82■■■□□ 2.04
ABCA4-204ENST00000470771 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
ABCA4-204ENST00000470771 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
ABCA4-204ENST00000470771 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
ABCA4-204ENST00000470771 SCRIBQ14160 1630 aa27.4■■□□□ 1.98
ABCA4-204ENST00000470771 EIF4G1Q04637 1599 aaKnown RBP27■■□□□ 1.91
ABCA4-204ENST00000470771 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
ABCA4-204ENST00000470771 CECR2Q9BXF3 1484 aa26.96■■□□□ 1.91
ABCA4-204ENST00000470771 NCAPD3P42695 1498 aa26.28■■□□□ 1.8
ABCA4-204ENST00000470771 ATAD2BQ9ULI0 1458 aa26.19■■□□□ 1.78
ABCA4-204ENST00000470771 SMARCA2P51531 1590 aa26.16■■□□□ 1.78
ABCA4-204ENST00000470771 SMARCA4P51532 1647 aa26.16■■□□□ 1.78
ABCA4-204ENST00000470771 BAZ1AQ9NRL2 1556 aaPredicted RBP26.14■■□□□ 1.78
ABCA4-204ENST00000470771 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
ABCA4-204ENST00000470771 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
ABCA4-204ENST00000470771 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
ABCA4-204ENST00000470771 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
ABCA4-204ENST00000470771 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
ABCA4-204ENST00000470771 CUX2O14529 1486 aa25.74■■□□□ 1.71
ABCA4-204ENST00000470771 NESP48681 1621 aa25.7■■□□□ 1.71
ABCA4-204ENST00000470771 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
ABCA4-204ENST00000470771 PDS5BQ9NTI5 1447 aa25.57■■□□□ 1.68
ABCA4-204ENST00000470771 WIZO95785 1651 aa25.56■■□□□ 1.68
ABCA4-204ENST00000470771 DNAJC5Q9H3Z4 198 aa25.56■■□□□ 1.68
ABCA4-204ENST00000470771 CADPSQ9ULU8 1353 aa25.53■■□□□ 1.68
ABCA4-204ENST00000470771 RSF1Q96T23 1441 aaPredicted RBP25.5■■□□□ 1.67
ABCA4-204ENST00000470771 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
ABCA4-204ENST00000470771 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
ABCA4-204ENST00000470771 TOP2AP11388 1531 aaKnown RBP25.31■■□□□ 1.64
ABCA4-204ENST00000470771 MRC2Q9UBG0 1479 aa25.25■■□□□ 1.63
ABCA4-204ENST00000470771 CFTRP13569 1480 aa25.23■■□□□ 1.63
ABCA4-204ENST00000470771 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
ABCA4-204ENST00000470771 FANCD2Q9BXW9 1451 aa25.19■■□□□ 1.62
ABCA4-204ENST00000470771 WDR62O43379 1518 aa25.12■■□□□ 1.61
ABCA4-204ENST00000470771 CCDC88BA6NC98 1476 aa25.05■■□□□ 1.6
ABCA4-204ENST00000470771 URB2Q14146 1524 aaKnown RBP24.91■■□□□ 1.58
ABCA4-204ENST00000470771 PRDM2Q13029 1718 aa24.85■■□□□ 1.57
ABCA4-204ENST00000470771 ABCC8Q09428 1581 aa24.79■■□□□ 1.56
ABCA4-204ENST00000470771 OSCARQ8IYS5 282 aa24.74■■□□□ 1.55
ABCA4-204ENST00000470771 IFT140Q96RY7 1462 aa24.71■■□□□ 1.55
ABCA4-204ENST00000470771 TOPBP1Q92547 1522 aa24.7■■□□□ 1.54
ABCA4-204ENST00000470771 SUPT5HO00267 1087 aaKnown RBP24.64■■□□□ 1.54
ABCA4-204ENST00000470771 DNMBPQ6XZF7 1577 aa24.62■■□□□ 1.53
ABCA4-204ENST00000470771 ZNF608Q9ULD9 1512 aaPredicted RBP24.56■■□□□ 1.52
ABCA4-204ENST00000470771 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
ABCA4-204ENST00000470771 POLA1P09884 1462 aaPredicted RBP24.46■■□□□ 1.51
ABCA4-204ENST00000470771 SOGA1O94964 1423 aa24.45■■□□□ 1.51
ABCA4-204ENST00000470771 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.5
ABCA4-204ENST00000470771 TARBP1Q13395 1621 aaKnown RBP24.42■■□□□ 1.5
ABCA4-204ENST00000470771 EIF4G3O43432 1585 aaKnown RBP24.41■■□□□ 1.5
ABCA4-204ENST00000470771 FBLN2P98095 1184 aa24.37■■□□□ 1.49
ABCA4-204ENST00000470771 RAD54L2Q9Y4B4 1467 aa24.37■■□□□ 1.49
ABCA4-204ENST00000470771 TDRD9Q8NDG6 1382 aaKnown RBP24.35■■□□□ 1.49
ABCA4-204ENST00000470771 FGD5Q6ZNL6 1462 aa24.34■■□□□ 1.49
ABCA4-204ENST00000470771 CUX1P39880 1505 aa24.31■■□□□ 1.48
ABCA4-204ENST00000470771 WDR97A6NE52 1622 aa24.26■■□□□ 1.47
ABCA4-204ENST00000470771 CHMP7Q8WUX9 453 aaPredicted RBP24.24■■□□□ 1.47
ABCA4-204ENST00000470771 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
ABCA4-204ENST00000470771 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
ABCA4-204ENST00000470771 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
ABCA4-204ENST00000470771 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
ABCA4-204ENST00000470771 SNAPC4Q5SXM2 1469 aa24.16■■□□□ 1.46
ABCA4-204ENST00000470771 MAGI1Q96QZ7 1491 aaPredicted RBP24.16■■□□□ 1.46
ABCA4-204ENST00000470771 CHD1O14646 1710 aa24.15■■□□□ 1.46
ABCA4-204ENST00000470771 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
ABCA4-204ENST00000470771 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.45
ABCA4-204ENST00000470771 GAPVD1Q14C86 1478 aa24.12■■□□□ 1.45
ABCA4-204ENST00000470771 CYB5RLQ6IPT4 315 aa24.11■■□□□ 1.45
ABCA4-204ENST00000470771 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
ABCA4-204ENST00000470771 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
ABCA4-204ENST00000470771 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
ABCA4-204ENST00000470771 TOP2BQ02880 1626 aa24■■□□□ 1.43
ABCA4-204ENST00000470771 PBRM1Q86U86 1689 aa23.95■■□□□ 1.43
ABCA4-204ENST00000470771 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.43
ABCA4-204ENST00000470771 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.43
ABCA4-204ENST00000470771 CLASP1Q7Z460 1538 aa23.93■■□□□ 1.42
ABCA4-204ENST00000470771 ARAP1Q96P48 1450 aa23.9■■□□□ 1.42
ABCA4-204ENST00000470771 FHAD1B1AJZ9 1412 aa23.84■■□□□ 1.41
ABCA4-204ENST00000470771 GRIN2AQ12879 1464 aa23.83■■□□□ 1.41
ABCA4-204ENST00000470771 TRHP20396 242 aaPredicted RBP23.83■■□□□ 1.41
ABCA4-204ENST00000470771 ERICH3Q5RHP9 1530 aa23.81■■□□□ 1.4
ABCA4-204ENST00000470771 ADAMTS12P58397 1594 aa23.77■■□□□ 1.4
ABCA4-204ENST00000470771 NUP160Q12769 1436 aa23.74■■□□□ 1.39
ABCA4-204ENST00000470771 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
ABCA4-204ENST00000470771 CEP170Q5SW79 1584 aa23.66■■□□□ 1.38
ABCA4-204ENST00000470771 JPH4Q96JJ6 628 aa23.63■■□□□ 1.37
ABCA4-204ENST00000470771 IGF1RP08069 1367 aa23.6■■□□□ 1.37
ABCA4-204ENST00000470771 PRG4Q92954 1404 aaPredicted RBP23.55■■□□□ 1.36
ABCA4-204ENST00000470771 SHROOM2Q13796 1616 aa23.54■■□□□ 1.36
ABCA4-204ENST00000470771 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms