RNA–Protein interactions for RNA: ENST00000466935.1

SDF2L1-202, Transcript of stromal cell derived factor 2 like 1, humanhuman

TSL 2

Gene SDF2L1, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-202ENST00000466935 SHANK2Q9UPX8 1470 aa39.17■■■■□ 3.86
SDF2L1-202ENST00000466935 CROCC2H7BZ55 1655 aa39.17■■■■□ 3.86
SDF2L1-202ENST00000466935 RNF17Q9BXT8 1623 aaKnown RBP39.17■■■■□ 3.86
SDF2L1-202ENST00000466935 FGD6Q6ZV73 1430 aa39.16■■■■□ 3.86
SDF2L1-202ENST00000466935 TCOF1Q13428 1488 aaKnown RBP39.14■■■■□ 3.86
SDF2L1-202ENST00000466935 FBXO41Q8TF61 875 aa39.12■■■■□ 3.85
SDF2L1-202ENST00000466935 NCOA1Q15788 1441 aa39.12■■■■□ 3.85
SDF2L1-202ENST00000466935 PTPRTO14522 1441 aa39.11■■■■□ 3.85
SDF2L1-202ENST00000466935 CEP170BQ9Y4F5 1589 aaPredicted RBP39.1■■■■□ 3.85
SDF2L1-202ENST00000466935 DUOX2Q9NRD8 1548 aa39.09■■■■□ 3.85
SDF2L1-202ENST00000466935 ABCC5O15440 1437 aa39.09■■■■□ 3.85
SDF2L1-202ENST00000466935 DNMT1P26358 1616 aaKnown RBP39.09■■■■□ 3.85
SDF2L1-202ENST00000466935 PZPP20742 1482 aa39.09■■■■□ 3.85
SDF2L1-202ENST00000466935 WASHC2CQ9Y4E1 1318 aa39.08■■■■□ 3.85
SDF2L1-202ENST00000466935 CAMSAP1Q5T5Y3 1602 aa39.07■■■■□ 3.84
SDF2L1-202ENST00000466935 ZC3H13Q5T200 1668 aaKnown RBP39.06■■■■□ 3.84
SDF2L1-202ENST00000466935 DAPK1P53355 1430 aa39.04■■■■□ 3.84
SDF2L1-202ENST00000466935 PLA2R1Q13018 1463 aa39.02■■■■□ 3.84
SDF2L1-202ENST00000466935 A2ML1A8K2U0 1454 aa38.99■■■■□ 3.83
SDF2L1-202ENST00000466935 KIF15Q9NS87 1388 aa38.99■■■■□ 3.83
SDF2L1-202ENST00000466935 MROH1Q8NDA8 1641 aa38.99■■■■□ 3.83
SDF2L1-202ENST00000466935 ABCC3O15438 1527 aa38.98■■■■□ 3.83
SDF2L1-202ENST00000466935 ERBINQ96RT1 1412 aa38.97■■■■□ 3.83
SDF2L1-202ENST00000466935 TNRQ92752 1358 aa38.96■■■■□ 3.83
SDF2L1-202ENST00000466935 CERKQ8TCT0 537 aa38.95■■■■□ 3.83
SDF2L1-202ENST00000466935 FBXO31Q5XUX0 539 aaPredicted RBP38.91■■■■□ 3.82
SDF2L1-202ENST00000466935 PKD2Q13563 968 aa38.9■■■■□ 3.82
SDF2L1-202ENST00000466935 PRDM15P57071 1507 aaPredicted RBP38.89■■■■□ 3.82
SDF2L1-202ENST00000466935 NLRP1Q9C000 1473 aa38.88■■■■□ 3.81
SDF2L1-202ENST00000466935 ANKRD30AQ9BXX3 1397 aa38.88■■■■□ 3.81
SDF2L1-202ENST00000466935 RRP7BPQ9NSQ0 103 aa38.86■■■■□ 3.81
SDF2L1-202ENST00000466935 CEP152O94986 1710 aa38.86■■■■□ 3.81
SDF2L1-202ENST00000466935 DEPDC5O75140 1603 aa38.85■■■■□ 3.81
SDF2L1-202ENST00000466935 SPATA31D1Q6ZQQ2 1576 aa38.84■■■■□ 3.81
SDF2L1-202ENST00000466935 ADGRL2O95490 1459 aa38.83■■■■□ 3.81
SDF2L1-202ENST00000466935 NCKAP5LQ9HCH0 1330 aa38.81■■■■□ 3.8
SDF2L1-202ENST00000466935 ERVK-7P63135 1459 aa38.78■■■■□ 3.8
SDF2L1-202ENST00000466935 LTBP4Q8N2S1 1624 aa38.78■■■■□ 3.8
SDF2L1-202ENST00000466935 POLR1AO95602 1720 aaPredicted RBP38.76■■■■□ 3.8
SDF2L1-202ENST00000466935 ARHGAP31Q2M1Z3 1444 aa38.76■■■■□ 3.8
SDF2L1-202ENST00000466935 FAM50AQ14320 339 aaKnown RBP38.75■■■■□ 3.79
SDF2L1-202ENST00000466935 CHIC2Q9UKJ5 165 aa38.74■■■■□ 3.79
SDF2L1-202ENST00000466935 UGGT1Q9NYU2 1555 aa38.74■■■■□ 3.79
SDF2L1-202ENST00000466935 KANK1Q14678 1352 aa38.71■■■■□ 3.79
SDF2L1-202ENST00000466935 THEMISQ8N1K5 641 aaPredicted RBP38.71■■■■□ 3.79
SDF2L1-202ENST00000466935 IQSEC2Q5JU85 1478 aa38.7■■■■□ 3.79
SDF2L1-202ENST00000466935 CFAP65Q6ZU64 1925 aaKnown RBP38.68■■■■□ 3.78
SDF2L1-202ENST00000466935 VWDEQ8N2E2 1590 aa38.68■■■■□ 3.78
SDF2L1-202ENST00000466935 LMTK2Q8IWU2 1503 aa38.67■■■■□ 3.78
SDF2L1-202ENST00000466935 NEURL4Q96JN8 1562 aa38.65■■■■□ 3.78
SDF2L1-202ENST00000466935 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.62■■■■□ 3.774e-10■■■■□ 20.1
SDF2L1-202ENST00000466935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.61■■■■□ 3.77
SDF2L1-202ENST00000466935 ANKLE2Q86XL3 938 aa38.6■■■■□ 3.77
SDF2L1-202ENST00000466935 ANKRD50Q9ULJ7 1429 aa38.59■■■■□ 3.77
SDF2L1-202ENST00000466935 MED14O60244 1454 aa38.57■■■■□ 3.76
SDF2L1-202ENST00000466935 UBR1Q8IWV7 1749 aa38.57■■■■□ 3.76
SDF2L1-202ENST00000466935 ZNF335Q9H4Z2 1342 aaPredicted RBP38.57■■■■□ 3.76
SDF2L1-202ENST00000466935 ROCK1Q13464 1354 aa38.54■■■■□ 3.76
SDF2L1-202ENST00000466935 EFCAB6Q5THR3 1501 aa38.53■■■■□ 3.76
SDF2L1-202ENST00000466935 NPHP4O75161 1426 aaPredicted RBP38.48■■■■□ 3.75
SDF2L1-202ENST00000466935 KDM5AP29375 1690 aaKnown RBP38.47■■■■□ 3.75
SDF2L1-202ENST00000466935 IQGAP1P46940 1657 aa38.46■■■■□ 3.75
SDF2L1-202ENST00000466935 UNC13BO14795 1591 aa38.44■■■■□ 3.74
SDF2L1-202ENST00000466935 SLIT1O75093 1534 aa38.43■■■■□ 3.74
SDF2L1-202ENST00000466935 RPRD2Q5VT52 1461 aaKnown RBP38.43■■■■□ 3.74
SDF2L1-202ENST00000466935 ARHGAP23Q9P227 1491 aa38.42■■■■□ 3.74
SDF2L1-202ENST00000466935 PIK3C2BO00750 1634 aa38.42■■■■□ 3.74
SDF2L1-202ENST00000466935 CPS1P31327 1500 aa38.42■■■■□ 3.74
SDF2L1-202ENST00000466935 NOS1P29475 1434 aa38.41■■■■□ 3.74
SDF2L1-202ENST00000466935 TET3O43151 1660 aa38.41■■■■□ 3.74
SDF2L1-202ENST00000466935 SYNMO15061 1565 aa38.4■■■■□ 3.74
SDF2L1-202ENST00000466935 SCAF11Q99590 1463 aaKnown RBP38.38■■■■□ 3.73
SDF2L1-202ENST00000466935 GCC2Q8IWJ2 1684 aa38.36■■■■□ 3.73
SDF2L1-202ENST00000466935 PPARGC1BQ86YN6 1023 aaKnown RBP38.35■■■■□ 3.73
SDF2L1-202ENST00000466935 RRBP1Q9P2E9 1410 aaKnown RBP38.31■■■■□ 3.72
SDF2L1-202ENST00000466935 IDI1Q13907 227 aa38.29■■■■□ 3.72
SDF2L1-202ENST00000466935 SLC52A1Q9NWF4 448 aa38.29■■■■□ 3.72
SDF2L1-202ENST00000466935 IQGAP3Q86VI3 1631 aa38.29■■■■□ 3.72
SDF2L1-202ENST00000466935 TMEM2Q9UHN6 1383 aa38.29■■■■□ 3.72
SDF2L1-202ENST00000466935 STAG3Q9UJ98 1225 aa38.27■■■■□ 3.72
SDF2L1-202ENST00000466935 ADGRB3O60242 1522 aa38.27■■■■□ 3.72
SDF2L1-202ENST00000466935 TXNDC2Q86VQ3 553 aa38.26■■■■□ 3.72
SDF2L1-202ENST00000466935 EID1Q9Y6B2 187 aa38.26■■■■□ 3.72
SDF2L1-202ENST00000466935 LTKP29376 864 aa38.25■■■■□ 3.71
SDF2L1-202ENST00000466935 ITGAEP38570 1179 aa38.24■■■■□ 3.71
SDF2L1-202ENST00000466935 UBAP1LF5GYI3 381 aa38.2■■■■□ 3.71
SDF2L1-202ENST00000466935 E9PCH4 1651 aa38.2■■■■□ 3.71
SDF2L1-202ENST00000466935 STRCP1A6NGW2 1772 aa38.18■■■■□ 3.7
SDF2L1-202ENST00000466935 NUP155O75694 1391 aa38.14■■■■□ 3.7
SDF2L1-202ENST00000466935 TMEM131LA2VDJ0 1609 aa38.09■■■■□ 3.69
SDF2L1-202ENST00000466935 MYO5BQ9ULV0 1848 aa38.08■■■■□ 3.69
SDF2L1-202ENST00000466935 LRRC7Q96NW7 1537 aa38.07■■■■□ 3.69
SDF2L1-202ENST00000466935 TOM1O60784 492 aa38.06■■■■□ 3.68
SDF2L1-202ENST00000466935 ZFYVE9O95405 1425 aa38.03■■■■□ 3.68
SDF2L1-202ENST00000466935 NAIPQ13075 1403 aa38.02■■■■□ 3.68
SDF2L1-202ENST00000466935 HDGFP51858 240 aaKnown RBP37.98■■■■□ 3.67
SDF2L1-202ENST00000466935 RIMS2Q9UQ26 1411 aa37.95■■■■□ 3.67
SDF2L1-202ENST00000466935 SPHKAPQ2M3C7 1700 aa37.95■■■■□ 3.67
SDF2L1-202ENST00000466935 ALKQ9UM73 1620 aa37.94■■■■□ 3.66
SDF2L1-202ENST00000466935 HFM1A2PYH4 1435 aa37.94■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms