RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-213ENST00000466707 FAM135AQ9P2D6 1515 aa40.33■■■■■ 4.05
ABCA2-213ENST00000466707 TCOF1Q13428 1488 aaKnown RBP40.32■■■■■ 4.04
ABCA2-213ENST00000466707 MAST1Q9Y2H9 1570 aa40.31■■■■■ 4.04
ABCA2-213ENST00000466707 A2ML1A8K2U0 1454 aa40.3■■■■■ 4.04
ABCA2-213ENST00000466707 DNMT1P26358 1616 aaKnown RBP40.3■■■■■ 4.04
ABCA2-213ENST00000466707 PZPP20742 1482 aa40.28■■■■■ 4.04
ABCA2-213ENST00000466707 MYOM3Q5VTT5 1437 aa40.26■■■■■ 4.04
ABCA2-213ENST00000466707 TSPY4P0CV99 314 aa40.25■■■■■ 4.03
ABCA2-213ENST00000466707 TSPY10P0CW01 314 aa40.25■■■■■ 4.03
ABCA2-213ENST00000466707 FBXO31Q5XUX0 539 aaPredicted RBP40.25■■■■■ 4.03
ABCA2-213ENST00000466707 RNF17Q9BXT8 1623 aaKnown RBP40.24■■■■■ 4.03
ABCA2-213ENST00000466707 TNRQ92752 1358 aa40.23■■■■■ 4.03
ABCA2-213ENST00000466707 MIA2Q96PC5 1412 aa40.22■■■■■ 4.03
ABCA2-213ENST00000466707 PKD2Q13563 968 aa40.21■■■■■ 4.03
ABCA2-213ENST00000466707 IQSEC2Q5JU85 1478 aa40.2■■■■■ 4.03
ABCA2-213ENST00000466707 WASHC2CQ9Y4E1 1318 aa40.19■■■■■ 4.02
ABCA2-213ENST00000466707 ZNF335Q9H4Z2 1342 aaPredicted RBP40.18■■■■■ 4.02
ABCA2-213ENST00000466707 EIF2AK4Q9P2K8 1649 aaKnown RBP40.16■■■■■ 4.02
ABCA2-213ENST00000466707 POLR1AO95602 1720 aaPredicted RBP40.16■■■■■ 4.02
ABCA2-213ENST00000466707 MROH1Q8NDA8 1641 aa40.13■■■■■ 4.02
ABCA2-213ENST00000466707 ABCC3O15438 1527 aa40.12■■■■■ 4.01
ABCA2-213ENST00000466707 ZC3H13Q5T200 1668 aaKnown RBP40.12■■■■■ 4.01
ABCA2-213ENST00000466707 NEURL4Q96JN8 1562 aa40.12■■■■■ 4.01
ABCA2-213ENST00000466707 CROCC2H7BZ55 1655 aa40.1■■■■■ 4.01
ABCA2-213ENST00000466707 CEP152O94986 1710 aa40.06■■■■■ 4
ABCA2-213ENST00000466707 PTPN23Q9H3S7 1636 aa40.05■■■■■ 4
ABCA2-213ENST00000466707 NLRP1Q9C000 1473 aa40.04■■■■■ 4
ABCA2-213ENST00000466707 DUOX2Q9NRD8 1548 aa40.03■■■■■ 4
ABCA2-213ENST00000466707 SPATA31D1Q6ZQQ2 1576 aa40.01■■■■■ 4
ABCA2-213ENST00000466707 UGGT1Q9NYU2 1555 aa40.01■■■■□ 3.99
ABCA2-213ENST00000466707 SHANK2Q9UPX8 1470 aa39.99■■■■□ 3.99
ABCA2-213ENST00000466707 ABCC5O15440 1437 aa39.99■■■■□ 3.99
ABCA2-213ENST00000466707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.98■■■■□ 3.99
ABCA2-213ENST00000466707 ERVK-7P63135 1459 aa39.95■■■■□ 3.99
ABCA2-213ENST00000466707 KIF15Q9NS87 1388 aa39.93■■■■□ 3.98
ABCA2-213ENST00000466707 APLP2Q06481 763 aa39.92■■■■□ 3.98
ABCA2-213ENST00000466707 FGD6Q6ZV73 1430 aa39.91■■■■□ 3.98
ABCA2-213ENST00000466707 PRDM15P57071 1507 aaPredicted RBP39.91■■■■□ 3.98
ABCA2-213ENST00000466707 CFAP65Q6ZU64 1925 aaKnown RBP39.91■■■■□ 3.98
ABCA2-213ENST00000466707 DEPDC5O75140 1603 aa39.91■■■■□ 3.98
ABCA2-213ENST00000466707 DAPK1P53355 1430 aa39.91■■■■□ 3.98
ABCA2-213ENST00000466707 THEMISQ8N1K5 641 aaPredicted RBP39.89■■■■□ 3.98
ABCA2-213ENST00000466707 ERBINQ96RT1 1412 aa39.87■■■■□ 3.97
ABCA2-213ENST00000466707 ANKLE2Q86XL3 938 aa39.86■■■■□ 3.97
ABCA2-213ENST00000466707 MED14O60244 1454 aa39.85■■■■□ 3.97
ABCA2-213ENST00000466707 VWDEQ8N2E2 1590 aa39.84■■■■□ 3.97
ABCA2-213ENST00000466707 UBAP1LF5GYI3 381 aa39.84■■■■□ 3.97
ABCA2-213ENST00000466707 RRP7BPQ9NSQ0 103 aa39.84■■■■□ 3.97
ABCA2-213ENST00000466707 DISP3Q9P2K9 1392 aa39.83■■■■□ 3.97
ABCA2-213ENST00000466707 IQGAP1P46940 1657 aa39.83■■■■□ 3.97
ABCA2-213ENST00000466707 NPHP4O75161 1426 aaPredicted RBP39.82■■■■□ 3.97
ABCA2-213ENST00000466707 UBR1Q8IWV7 1749 aa39.82■■■■□ 3.96
ABCA2-213ENST00000466707 CPS1P31327 1500 aa39.81■■■■□ 3.96
ABCA2-213ENST00000466707 ARHGAP31Q2M1Z3 1444 aa39.75■■■■□ 3.95
ABCA2-213ENST00000466707 STRCP1A6NGW2 1772 aa39.71■■■■□ 3.95
ABCA2-213ENST00000466707 CHIC2Q9UKJ5 165 aa39.7■■■■□ 3.95
ABCA2-213ENST00000466707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.68■■■■□ 3.94
ABCA2-213ENST00000466707 ILDR2Q71H61 639 aa39.67■■■■□ 3.94
ABCA2-213ENST00000466707 ANKRD30AQ9BXX3 1397 aa39.67■■■■□ 3.94
ABCA2-213ENST00000466707 PIK3C2BO00750 1634 aa39.64■■■■□ 3.94
ABCA2-213ENST00000466707 ARHGAP23Q9P227 1491 aa39.62■■■■□ 3.93
ABCA2-213ENST00000466707 LMTK2Q8IWU2 1503 aa39.62■■■■□ 3.93
ABCA2-213ENST00000466707 ADGRL2O95490 1459 aa39.62■■■■□ 3.93
ABCA2-213ENST00000466707 SCAF11Q99590 1463 aaKnown RBP39.62■■■■□ 3.93
ABCA2-213ENST00000466707 SLIT1O75093 1534 aa39.61■■■■□ 3.93
ABCA2-213ENST00000466707 KANK1Q14678 1352 aa39.6■■■■□ 3.93
ABCA2-213ENST00000466707 ALKQ9UM73 1620 aa39.59■■■■□ 3.93
ABCA2-213ENST00000466707 SYNMO15061 1565 aa39.55■■■■□ 3.92
ABCA2-213ENST00000466707 LTKP29376 864 aa39.54■■■■□ 3.92
ABCA2-213ENST00000466707 PIP4K2BP78356 416 aa39.54■■■■□ 3.92
ABCA2-213ENST00000466707 EFCAB6Q5THR3 1501 aa39.54■■■■□ 3.92
ABCA2-213ENST00000466707 SCAF1Q9H7N4 1312 aaKnown RBP39.53■■■■□ 3.92
ABCA2-213ENST00000466707 LRRC7Q96NW7 1537 aa39.53■■■■□ 3.92
ABCA2-213ENST00000466707 FAM50AQ14320 339 aaKnown RBP39.52■■■■□ 3.92
ABCA2-213ENST00000466707 TOM1O60784 492 aa39.5■■■■□ 3.91
ABCA2-213ENST00000466707 KDM5AP29375 1690 aaKnown RBP39.49■■■■□ 3.91
ABCA2-213ENST00000466707 HSPA1LP34931 641 aa39.47■■■■□ 3.91
ABCA2-213ENST00000466707 TXNDC2Q86VQ3 553 aa39.47■■■■□ 3.91
ABCA2-213ENST00000466707 NOS1P29475 1434 aa39.44■■■■□ 3.9
ABCA2-213ENST00000466707 TMEM2Q9UHN6 1383 aa39.44■■■■□ 3.9
ABCA2-213ENST00000466707 ANKRD50Q9ULJ7 1429 aa39.42■■■■□ 3.9
ABCA2-213ENST00000466707 IDI1Q13907 227 aa39.41■■■■□ 3.9
ABCA2-213ENST00000466707 XIRP1Q702N8 1843 aaKnown RBP39.39■■■■□ 3.9
ABCA2-213ENST00000466707 ADGRB3O60242 1522 aa39.38■■■■□ 3.89
ABCA2-213ENST00000466707 EID1Q9Y6B2 187 aa39.37■■■■□ 3.89
ABCA2-213ENST00000466707 STAG3Q9UJ98 1225 aa39.36■■■■□ 3.89
ABCA2-213ENST00000466707 TET3O43151 1660 aa39.35■■■■□ 3.89
ABCA2-213ENST00000466707 MED1Q15648 1581 aaPredicted RBP39.33■■■■□ 3.89
ABCA2-213ENST00000466707 SOCS7O14512 581 aa39.32■■■■□ 3.89
ABCA2-213ENST00000466707 UNC13BO14795 1591 aa39.32■■■■□ 3.88
ABCA2-213ENST00000466707 RPRD2Q5VT52 1461 aaKnown RBP39.3■■■■□ 3.88
ABCA2-213ENST00000466707 GCC2Q8IWJ2 1684 aa39.29■■■■□ 3.88
ABCA2-213ENST00000466707 MYO5BQ9ULV0 1848 aa39.28■■■■□ 3.88
ABCA2-213ENST00000466707 SLC52A1Q9NWF4 448 aa39.21■■■■□ 3.87
ABCA2-213ENST00000466707 E9PCH4 1651 aa39.19■■■■□ 3.86
ABCA2-213ENST00000466707 ROCK1Q13464 1354 aa39.19■■■■□ 3.86
ABCA2-213ENST00000466707 SLC26A8Q96RN1 970 aa39.17■■■■□ 3.86
ABCA2-213ENST00000466707 SENP3Q9H4L4 574 aaPredicted RBP39.17■■■■□ 3.86
ABCA2-213ENST00000466707 TMEM131LA2VDJ0 1609 aa39.16■■■■□ 3.86
ABCA2-213ENST00000466707 ZFYVE9O95405 1425 aa39.15■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms