RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-213ENST00000466707 NISCHQ9Y2I1 1504 aa63.89■■■■■ 7.82
ABCA2-213ENST00000466707 CCDC180Q9P1Z9 1646 aa57.34■■■■■ 6.77
ABCA2-213ENST00000466707 ABCC9O60706 1549 aa57.21■■■■■ 6.75
ABCA2-213ENST00000466707 RB1CC1Q8TDY2 1594 aa54.47■■■■■ 6.31
ABCA2-213ENST00000466707 NACADO15069 1562 aa54.11■■■■■ 6.25
ABCA2-213ENST00000466707 DCAF8L2P0C7V8 631 aa53.74■■■■■ 6.19
ABCA2-213ENST00000466707 DNAJC5BQ9UF47 199 aa53.57■■■■■ 6.17
ABCA2-213ENST00000466707 UNC13AQ9UPW8 1703 aa53.4■■■■■ 6.14
ABCA2-213ENST00000466707 MYO15BQ96JP2 1530 aa53.38■■■■■ 6.14
ABCA2-213ENST00000466707 PABPN1Q86U42 306 aaKnown RBP eCLIP53.22■■■■■ 6.11
ABCA2-213ENST00000466707 ZCCHC6Q5VYS8 1495 aaKnown RBP53.01■■■■■ 6.08
ABCA2-213ENST00000466707 BICRAQ9NZM4 1560 aa52.98■■■■■ 6.07
ABCA2-213ENST00000466707 DCAF1Q9Y4B6 1507 aa52.76■■■■■ 6.04
ABCA2-213ENST00000466707 SCRIBQ14160 1630 aa52.28■■■■■ 5.96
ABCA2-213ENST00000466707 SHROOM4Q9ULL8 1493 aa52.15■■■■■ 5.94
ABCA2-213ENST00000466707 CC2D2AQ9P2K1 1620 aa51.71■■■■■ 5.87
ABCA2-213ENST00000466707 EIF4G1Q04637 1599 aaKnown RBP51.62■■■■■ 5.85
ABCA2-213ENST00000466707 CECR2Q9BXF3 1484 aa51.49■■■■■ 5.83
ABCA2-213ENST00000466707 NCAPD3P42695 1498 aa49.94■■■■■ 5.58
ABCA2-213ENST00000466707 SMARCA4P51532 1647 aa49.87■■■■■ 5.57
ABCA2-213ENST00000466707 ATAD2BQ9ULI0 1458 aa49.83■■■■■ 5.57
ABCA2-213ENST00000466707 SMARCA2P51531 1590 aa49.68■■■■■ 5.54
ABCA2-213ENST00000466707 HMGXB3Q12766 1538 aa49.64■■■■■ 5.54
ABCA2-213ENST00000466707 BAZ1AQ9NRL2 1556 aaPredicted RBP49.57■■■■■ 5.53
ABCA2-213ENST00000466707 PEG3Q9GZU2 1588 aa49.36■■■■■ 5.49
ABCA2-213ENST00000466707 BAZ1BQ9UIG0 1483 aaKnown RBP49.35■■■■■ 5.49
ABCA2-213ENST00000466707 ERCC6Q03468 1493 aa49.33■■■■■ 5.49
ABCA2-213ENST00000466707 MROH2BQ7Z745 1585 aa49.27■■■■■ 5.48
ABCA2-213ENST00000466707 CUX2O14529 1486 aa49.22■■■■■ 5.47
ABCA2-213ENST00000466707 NESP48681 1621 aa49.22■■■■■ 5.47
ABCA2-213ENST00000466707 DNAJC5Q9H3Z4 198 aa49.03■■■■■ 5.44
ABCA2-213ENST00000466707 LAMC3Q9Y6N6 1575 aa48.83■■■■■ 5.41
ABCA2-213ENST00000466707 THOC2Q8NI27 1593 aaKnown RBP48.74■■■■■ 5.39
ABCA2-213ENST00000466707 WIZO95785 1651 aa48.72■■■■■ 5.39
ABCA2-213ENST00000466707 KIF21AQ7Z4S6 1674 aa48.64■■■■■ 5.38
ABCA2-213ENST00000466707 PDS5BQ9NTI5 1447 aa48.47■■■■■ 5.35
ABCA2-213ENST00000466707 CADPSQ9ULU8 1353 aa48.4■■■■■ 5.34
ABCA2-213ENST00000466707 RSF1Q96T23 1441 aaPredicted RBP48.24■■■■■ 5.31
ABCA2-213ENST00000466707 MRC2Q9UBG0 1479 aa48.12■■■■■ 5.29
ABCA2-213ENST00000466707 TOP2AP11388 1531 aaKnown RBP48.06■■■■■ 5.28
ABCA2-213ENST00000466707 WDR62O43379 1518 aa48.03■■■■■ 5.28
ABCA2-213ENST00000466707 CEP164Q9UPV0 1460 aa47.94■■■■■ 5.26
ABCA2-213ENST00000466707 CFTRP13569 1480 aa47.91■■■■■ 5.26
ABCA2-213ENST00000466707 FANCD2Q9BXW9 1451 aa47.9■■■■■ 5.26
ABCA2-213ENST00000466707 PRDM2Q13029 1718 aa47.57■■■■■ 5.21
ABCA2-213ENST00000466707 URB2Q14146 1524 aaKnown RBP47.56■■■■■ 5.2
ABCA2-213ENST00000466707 CCDC88BA6NC98 1476 aa47.49■■■■■ 5.19
ABCA2-213ENST00000466707 TOPBP1Q92547 1522 aa47.03■■■■■ 5.12
ABCA2-213ENST00000466707 IFT140Q96RY7 1462 aa46.95■■■■■ 5.11
ABCA2-213ENST00000466707 ZNF608Q9ULD9 1512 aaPredicted RBP46.95■■■■■ 5.11
ABCA2-213ENST00000466707 TRIM41Q8WV44 630 aa46.94■■■■■ 5.1
ABCA2-213ENST00000466707 OSCARQ8IYS5 282 aa46.89■■■■■ 5.1
ABCA2-213ENST00000466707 DNMBPQ6XZF7 1577 aa46.88■■■■■ 5.1
ABCA2-213ENST00000466707 ABCC8Q09428 1581 aa46.83■■■■■ 5.09
ABCA2-213ENST00000466707 EIF4G3O43432 1585 aaKnown RBP46.73■■■■■ 5.07
ABCA2-213ENST00000466707 TARBP1Q13395 1621 aaKnown RBP46.65■■■■■ 5.06
ABCA2-213ENST00000466707 POLA1P09884 1462 aaPredicted RBP46.57■■■■■ 5.04
ABCA2-213ENST00000466707 AQRO60306 1485 aaKnown RBP eCLIP46.49■■■■■ 5.03
ABCA2-213ENST00000466707 RIMBP3CA6NJZ7 1639 aa46.46■■■■■ 5.03
ABCA2-213ENST00000466707 RIMBP3BA6NNM3 1639 aa46.46■■■■■ 5.03
ABCA2-213ENST00000466707 RIMBP3Q9UFD9 1639 aa46.46■■■■■ 5.03
ABCA2-213ENST00000466707 CHD1O14646 1710 aa46.4■■■■■ 5.02
ABCA2-213ENST00000466707 RAD54L2Q9Y4B4 1467 aa46.39■■■■■ 5.02
ABCA2-213ENST00000466707 CUX1P39880 1505 aa46.29■■■■■ 5
ABCA2-213ENST00000466707 ARHGEF11O15085 1522 aa46.28■■■■■ 5
ABCA2-213ENST00000466707 FGD5Q6ZNL6 1462 aa46.28■■■■■ 5
ABCA2-213ENST00000466707 SOGA1O94964 1423 aa46.28■■■■■ 5
ABCA2-213ENST00000466707 TDRD9Q8NDG6 1382 aaKnown RBP46.2■■■■■ 4.99
ABCA2-213ENST00000466707 WDR97A6NE52 1622 aa46.11■■■■■ 4.97
ABCA2-213ENST00000466707 SUPT5HO00267 1087 aaKnown RBP46.09■■■■■ 4.97
ABCA2-213ENST00000466707 FBLN2P98095 1184 aa46.07■■■■■ 4.97
ABCA2-213ENST00000466707 SNAPC4Q5SXM2 1469 aa46.05■■■■■ 4.96
ABCA2-213ENST00000466707 MAGI1Q96QZ7 1491 aaPredicted RBP45.89■■■■■ 4.94
ABCA2-213ENST00000466707 GRIN2BQ13224 1484 aa45.88■■■■■ 4.94
ABCA2-213ENST00000466707 ARAP1Q96P48 1450 aa45.87■■■■■ 4.93
ABCA2-213ENST00000466707 PBRM1Q86U86 1689 aa45.84■■■■■ 4.93
ABCA2-213ENST00000466707 CYB5RLQ6IPT4 315 aa45.83■■■■■ 4.93
ABCA2-213ENST00000466707 CLASP1Q7Z460 1538 aa45.82■■■■■ 4.93
ABCA2-213ENST00000466707 SYNJ2O15056 1496 aa45.74■■■■■ 4.91
ABCA2-213ENST00000466707 GAPVD1Q14C86 1478 aa45.74■■■■■ 4.91
ABCA2-213ENST00000466707 ABCA5Q8WWZ7 1642 aa45.74■■■■■ 4.91
ABCA2-213ENST00000466707 ABCA10Q8WWZ4 1543 aa45.74■■■■■ 4.91
ABCA2-213ENST00000466707 SYNJ1O43426 1573 aa45.74■■■■■ 4.91
ABCA2-213ENST00000466707 CHMP7Q8WUX9 453 aaPredicted RBP45.73■■■■■ 4.91
ABCA2-213ENST00000466707 BIVM-ERCC5R4GMW8 1640 aa45.59■■■■■ 4.89
ABCA2-213ENST00000466707 TOP2BQ02880 1626 aa45.55■■■■■ 4.88
ABCA2-213ENST00000466707 WRNQ14191 1432 aaPredicted RBP eCLIP45.52■■■■■ 4.88
ABCA2-213ENST00000466707 ADAMTS12P58397 1594 aa45.38■■■■■ 4.86
ABCA2-213ENST00000466707 GRIN2AQ12879 1464 aa45.33■■■■■ 4.85
ABCA2-213ENST00000466707 TRHP20396 242 aaPredicted RBP45.26■■■■■ 4.84
ABCA2-213ENST00000466707 CEP170Q5SW79 1584 aa45.23■■■■■ 4.83
ABCA2-213ENST00000466707 NUP160Q12769 1436 aa45.18■■■■■ 4.82
ABCA2-213ENST00000466707 ERICH3Q5RHP9 1530 aa45.16■■■■■ 4.82
ABCA2-213ENST00000466707 ERCC6L2Q5T890 1561 aa45.16■■■■■ 4.82
ABCA2-213ENST00000466707 FHAD1B1AJZ9 1412 aa45.15■■■■■ 4.82
ABCA2-213ENST00000466707 SHROOM2Q13796 1616 aa45.02■■■■■ 4.8
ABCA2-213ENST00000466707 RUSC2Q8N2Y8 1516 aa44.75■■■■■ 4.76
ABCA2-213ENST00000466707 PRG4Q92954 1404 aaPredicted RBP44.69■■■■■ 4.75
ABCA2-213ENST00000466707 JPH4Q96JJ6 628 aa44.61■■■■■ 4.73
ABCA2-213ENST00000466707 KIF27Q86VH2 1401 aa44.57■■■■■ 4.72
Retrieved 100 of 20,778 RNA–protein pairs in 676.5 ms