RNA–Protein interactions for RNA: ENST00000466559.1

REPIN1-204, Transcript of replication initiator 1, humanhuman

TSL 1 (best) BASIC

Gene REPIN1, Length 1,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-204ENST00000466559 NCOA1Q15788 1441 aa40.58■■■■■ 4.09
REPIN1-204ENST00000466559 PTPRTO14522 1441 aa40.57■■■■■ 4.08
REPIN1-204ENST00000466559 ZNF142P52746 1687 aaPredicted RBP40.56■■■■■ 4.08
REPIN1-204ENST00000466559 CAMSAP1Q5T5Y3 1602 aa40.56■■■■■ 4.08
REPIN1-204ENST00000466559 FGD6Q6ZV73 1430 aa40.55■■■■■ 4.08
REPIN1-204ENST00000466559 CEP170BQ9Y4F5 1589 aaPredicted RBP40.54■■■■■ 4.08
REPIN1-204ENST00000466559 CERKQ8TCT0 537 aa40.54■■■■■ 4.08
REPIN1-204ENST00000466559 EIF2AK4Q9P2K8 1649 aaKnown RBP40.53■■■■■ 4.08
REPIN1-204ENST00000466559 PZPP20742 1482 aa40.51■■■■■ 4.08
REPIN1-204ENST00000466559 SHANK2Q9UPX8 1470 aa40.51■■■■■ 4.08
REPIN1-204ENST00000466559 RNF17Q9BXT8 1623 aaKnown RBP40.5■■■■■ 4.07
REPIN1-204ENST00000466559 DUOX2Q9NRD8 1548 aa40.5■■■■■ 4.07
REPIN1-204ENST00000466559 CROCC2H7BZ55 1655 aa40.49■■■■■ 4.07
REPIN1-204ENST00000466559 ABCC5O15440 1437 aa40.49■■■■■ 4.07
REPIN1-204ENST00000466559 TCOF1Q13428 1488 aaKnown RBP40.47■■■■■ 4.07
REPIN1-204ENST00000466559 TNRQ92752 1358 aa40.47■■■■■ 4.07
REPIN1-204ENST00000466559 DAPK1P53355 1430 aa40.45■■■■■ 4.07
REPIN1-204ENST00000466559 FBXO31Q5XUX0 539 aaPredicted RBP40.45■■■■■ 4.07
REPIN1-204ENST00000466559 KIF15Q9NS87 1388 aa40.45■■■■■ 4.07
REPIN1-204ENST00000466559 DNMT1P26358 1616 aaKnown RBP40.45■■■■■ 4.07
REPIN1-204ENST00000466559 A2ML1A8K2U0 1454 aa40.45■■■■■ 4.07
REPIN1-204ENST00000466559 PLA2R1Q13018 1463 aa40.44■■■■■ 4.06
REPIN1-204ENST00000466559 ZC3H13Q5T200 1668 aaKnown RBP40.42■■■■■ 4.06
REPIN1-204ENST00000466559 PKD2Q13563 968 aa40.41■■■■■ 4.06
REPIN1-204ENST00000466559 RRP7BPQ9NSQ0 103 aa40.4■■■■■ 4.06
REPIN1-204ENST00000466559 NCKAP5LQ9HCH0 1330 aa40.39■■■■■ 4.06
REPIN1-204ENST00000466559 ABCC3O15438 1527 aa40.38■■■■■ 4.06
REPIN1-204ENST00000466559 ERBINQ96RT1 1412 aa40.36■■■■■ 4.05
REPIN1-204ENST00000466559 MROH1Q8NDA8 1641 aa40.33■■■■■ 4.05
REPIN1-204ENST00000466559 ANKRD30AQ9BXX3 1397 aa40.33■■■■■ 4.05
REPIN1-204ENST00000466559 FAM50AQ14320 339 aaKnown RBP40.3■■■■■ 4.04
REPIN1-204ENST00000466559 CHIC2Q9UKJ5 165 aa40.3■■■■■ 4.04
REPIN1-204ENST00000466559 NLRP1Q9C000 1473 aa40.3■■■■■ 4.04
REPIN1-204ENST00000466559 CEP152O94986 1710 aa40.28■■■■■ 4.04
REPIN1-204ENST00000466559 PRDM15P57071 1507 aaPredicted RBP40.24■■■■■ 4.03
REPIN1-204ENST00000466559 THEMISQ8N1K5 641 aaPredicted RBP40.23■■■■■ 4.03
REPIN1-204ENST00000466559 SPATA31D1Q6ZQQ2 1576 aa40.22■■■■■ 4.03
REPIN1-204ENST00000466559 KANK1Q14678 1352 aa40.22■■■■■ 4.03
REPIN1-204ENST00000466559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.21■■■■■ 4.03
REPIN1-204ENST00000466559 LTBP4Q8N2S1 1624 aa40.2■■■■■ 4.03
REPIN1-204ENST00000466559 ERVK-7P63135 1459 aa40.19■■■■■ 4.03
REPIN1-204ENST00000466559 UGGT1Q9NYU2 1555 aa40.19■■■■■ 4.02
REPIN1-204ENST00000466559 CFAP65Q6ZU64 1925 aaKnown RBP40.17■■■■■ 4.02
REPIN1-204ENST00000466559 POLR1AO95602 1720 aaPredicted RBP40.16■■■■■ 4.02
REPIN1-204ENST00000466559 DEPDC5O75140 1603 aa40.16■■■■■ 4.02
REPIN1-204ENST00000466559 ADGRL2O95490 1459 aa40.15■■■■■ 4.02
REPIN1-204ENST00000466559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.14■■■■■ 4.023e-6■■■■□ 22.5
REPIN1-204ENST00000466559 ANKLE2Q86XL3 938 aa40.14■■■■■ 4.02
REPIN1-204ENST00000466559 ZNF335Q9H4Z2 1342 aaPredicted RBP40.13■■■■■ 4.01
REPIN1-204ENST00000466559 ARHGAP31Q2M1Z3 1444 aa40.12■■■■■ 4.01
REPIN1-204ENST00000466559 IQSEC2Q5JU85 1478 aa40.1■■■■■ 4.01
REPIN1-204ENST00000466559 NEURL4Q96JN8 1562 aa40.05■■■■■ 4
REPIN1-204ENST00000466559 ANKRD50Q9ULJ7 1429 aa40■■■■□ 3.99
REPIN1-204ENST00000466559 LMTK2Q8IWU2 1503 aa40■■■■□ 3.99
REPIN1-204ENST00000466559 VWDEQ8N2E2 1590 aa39.97■■■■□ 3.99
REPIN1-204ENST00000466559 NPHP4O75161 1426 aaPredicted RBP39.97■■■■□ 3.99
REPIN1-204ENST00000466559 PPARGC1BQ86YN6 1023 aaKnown RBP39.95■■■■□ 3.99
REPIN1-204ENST00000466559 MED14O60244 1454 aa39.94■■■■□ 3.98
REPIN1-204ENST00000466559 UBR1Q8IWV7 1749 aa39.94■■■■□ 3.98
REPIN1-204ENST00000466559 EFCAB6Q5THR3 1501 aa39.88■■■■□ 3.97
REPIN1-204ENST00000466559 STAG3Q9UJ98 1225 aa39.88■■■■□ 3.97
REPIN1-204ENST00000466559 IQGAP1P46940 1657 aa39.88■■■■□ 3.97
REPIN1-204ENST00000466559 ROCK1Q13464 1354 aa39.87■■■■□ 3.97
REPIN1-204ENST00000466559 CPS1P31327 1500 aa39.86■■■■□ 3.97
REPIN1-204ENST00000466559 ITGAEP38570 1179 aa39.83■■■■□ 3.97
REPIN1-204ENST00000466559 PIK3C2BO00750 1634 aa39.83■■■■□ 3.97
REPIN1-204ENST00000466559 UBAP1LF5GYI3 381 aa39.82■■■■□ 3.97
REPIN1-204ENST00000466559 SCAF11Q99590 1463 aaKnown RBP39.81■■■■□ 3.96
REPIN1-204ENST00000466559 EID1Q9Y6B2 187 aa39.8■■■■□ 3.96
REPIN1-204ENST00000466559 SLIT1O75093 1534 aa39.8■■■■□ 3.96
REPIN1-204ENST00000466559 TXNDC2Q86VQ3 553 aa39.79■■■■□ 3.96
REPIN1-204ENST00000466559 ARHGAP23Q9P227 1491 aa39.79■■■■□ 3.96
REPIN1-204ENST00000466559 NOS1P29475 1434 aa39.78■■■■□ 3.96
REPIN1-204ENST00000466559 RPRD2Q5VT52 1461 aaKnown RBP39.77■■■■□ 3.96
REPIN1-204ENST00000466559 IDI1Q13907 227 aa39.76■■■■□ 3.96
REPIN1-204ENST00000466559 SYNMO15061 1565 aa39.76■■■■□ 3.95
REPIN1-204ENST00000466559 TET3O43151 1660 aa39.75■■■■□ 3.95
REPIN1-204ENST00000466559 UNC13BO14795 1591 aa39.75■■■■□ 3.95
REPIN1-204ENST00000466559 KDM5AP29375 1690 aaKnown RBP39.74■■■■□ 3.95
REPIN1-204ENST00000466559 SLC52A1Q9NWF4 448 aa39.73■■■■□ 3.95
REPIN1-204ENST00000466559 TMEM2Q9UHN6 1383 aa39.72■■■■□ 3.95
REPIN1-204ENST00000466559 LTKP29376 864 aa39.72■■■■□ 3.95
REPIN1-204ENST00000466559 GCC2Q8IWJ2 1684 aa39.69■■■■□ 3.94
REPIN1-204ENST00000466559 ADGRB3O60242 1522 aa39.65■■■■□ 3.94
REPIN1-204ENST00000466559 TOM1O60784 492 aa39.62■■■■□ 3.93
REPIN1-204ENST00000466559 RRBP1Q9P2E9 1410 aaKnown RBP39.6■■■■□ 3.93
REPIN1-204ENST00000466559 IQGAP3Q86VI3 1631 aa39.6■■■■□ 3.93
REPIN1-204ENST00000466559 NUP155O75694 1391 aa39.59■■■■□ 3.93
REPIN1-204ENST00000466559 SCAF1Q9H7N4 1312 aaKnown RBP39.57■■■■□ 3.92
REPIN1-204ENST00000466559 STRCP1A6NGW2 1772 aa39.56■■■■□ 3.92
REPIN1-204ENST00000466559 E9PCH4 1651 aa39.54■■■■□ 3.92
REPIN1-204ENST00000466559 LRRC7Q96NW7 1537 aa39.51■■■■□ 3.92
REPIN1-204ENST00000466559 PIP4K2BP78356 416 aa39.51■■■■□ 3.92
REPIN1-204ENST00000466559 HDGFP51858 240 aaKnown RBP39.48■■■■□ 3.91
REPIN1-204ENST00000466559 BCANQ96GW7 911 aa39.47■■■■□ 3.91
REPIN1-204ENST00000466559 CHGAP10645 457 aaKnown RBP39.46■■■■□ 3.91
REPIN1-204ENST00000466559 MYO5BQ9ULV0 1848 aa39.44■■■■□ 3.9
REPIN1-204ENST00000466559 TMEM131LA2VDJ0 1609 aa39.43■■■■□ 3.9
REPIN1-204ENST00000466559 PPP1R15AO75807 674 aaPredicted RBP39.42■■■■□ 3.9
REPIN1-204ENST00000466559 DISP3Q9P2K9 1392 aa39.42■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms