RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 PLPPR3Q6T4P5 718 aa19.93■□□□□ 0.78
COL5A1-206ENST00000465877 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
COL5A1-206ENST00000465877 MYO3AQ8NEV4 1616 aa19.93■□□□□ 0.78
COL5A1-206ENST00000465877 ZNF142P52746 1687 aaPredicted RBP19.92■□□□□ 0.78
COL5A1-206ENST00000465877 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
COL5A1-206ENST00000465877 ESF1Q9H501 851 aaKnown RBP19.92■□□□□ 0.78
COL5A1-206ENST00000465877 CAMSAP1Q5T5Y3 1602 aa19.91■□□□□ 0.78
COL5A1-206ENST00000465877 SETD1BQ9UPS6 1966 aaKnown RBP19.91■□□□□ 0.78
COL5A1-206ENST00000465877 KIF3BO15066 747 aa19.89■□□□□ 0.77
COL5A1-206ENST00000465877 ABCC3O15438 1527 aa19.89■□□□□ 0.77
COL5A1-206ENST00000465877 GGT6Q6P531 493 aa19.89■□□□□ 0.77
COL5A1-206ENST00000465877 ANKRD30AQ9BXX3 1397 aa19.89■□□□□ 0.77
COL5A1-206ENST00000465877 RRBP1Q9P2E9 1410 aaKnown RBP19.89■□□□□ 0.77
COL5A1-206ENST00000465877 NCOA1Q15788 1441 aa19.88■□□□□ 0.77
COL5A1-206ENST00000465877 CEBPAP49715 358 aaPredicted RBP19.87■□□□□ 0.77
COL5A1-206ENST00000465877 NPATQ14207 1427 aa19.86■□□□□ 0.77
COL5A1-206ENST00000465877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.86■□□□□ 0.77
COL5A1-206ENST00000465877 PTPRKQ15262 1439 aa19.85■□□□□ 0.77
COL5A1-206ENST00000465877 UHRF1BP1Q6BDS2 1440 aa19.85■□□□□ 0.77
COL5A1-206ENST00000465877 ZMYM3Q14202 1370 aa19.84■□□□□ 0.77
COL5A1-206ENST00000465877 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
COL5A1-206ENST00000465877 PZPP20742 1482 aa19.84■□□□□ 0.77
COL5A1-206ENST00000465877 UNC13BO14795 1591 aa19.83■□□□□ 0.77
COL5A1-206ENST00000465877 CHIC2Q9UKJ5 165 aa19.83■□□□□ 0.77
COL5A1-206ENST00000465877 GCC2Q8IWJ2 1684 aa19.83■□□□□ 0.76
COL5A1-206ENST00000465877 RRP7BPQ9NSQ0 103 aa19.82■□□□□ 0.76
COL5A1-206ENST00000465877 VWDEQ8N2E2 1590 aa19.82■□□□□ 0.76
COL5A1-206ENST00000465877 CEP170BQ9Y4F5 1589 aaPredicted RBP19.82■□□□□ 0.76
COL5A1-206ENST00000465877 ROCK1Q13464 1354 aa19.79■□□□□ 0.76
COL5A1-206ENST00000465877 SPATA31D1Q6ZQQ2 1576 aa19.78■□□□□ 0.76
COL5A1-206ENST00000465877 ANKRD50Q9ULJ7 1429 aa19.77■□□□□ 0.76
COL5A1-206ENST00000465877 STRCQ7RTU9 1775 aa19.77■□□□□ 0.76
COL5A1-206ENST00000465877 WASHC2CQ9Y4E1 1318 aa19.76■□□□□ 0.75
COL5A1-206ENST00000465877 LMTK2Q8IWU2 1503 aa19.76■□□□□ 0.75
COL5A1-206ENST00000465877 CFAP65Q6ZU64 1925 aaKnown RBP19.76■□□□□ 0.75
COL5A1-206ENST00000465877 EFCAB6Q5THR3 1501 aa19.76■□□□□ 0.75
COL5A1-206ENST00000465877 TET3O43151 1660 aa19.75■□□□□ 0.75
COL5A1-206ENST00000465877 ERVK-7P63135 1459 aa19.73■□□□□ 0.75
COL5A1-206ENST00000465877 IQGAP3Q86VI3 1631 aa19.73■□□□□ 0.75
COL5A1-206ENST00000465877 HSPA2P54652 639 aa19.73■□□□□ 0.75
COL5A1-206ENST00000465877 POLR1AO95602 1720 aaPredicted RBP19.72■□□□□ 0.75
COL5A1-206ENST00000465877 KANK1Q14678 1352 aa19.71■□□□□ 0.75
COL5A1-206ENST00000465877 ITGAEP38570 1179 aa19.71■□□□□ 0.75
COL5A1-206ENST00000465877 A2ML1A8K2U0 1454 aa19.7■□□□□ 0.74
COL5A1-206ENST00000465877 TNRQ92752 1358 aa19.7■□□□□ 0.74
COL5A1-206ENST00000465877 ARHGAP31Q2M1Z3 1444 aa19.69■□□□□ 0.74
COL5A1-206ENST00000465877 NLRP1Q9C000 1473 aa19.67■□□□□ 0.74
COL5A1-206ENST00000465877 E9PCH4 1651 aa19.67■□□□□ 0.74
COL5A1-206ENST00000465877 UBR1Q8IWV7 1749 aa19.67■□□□□ 0.74
COL5A1-206ENST00000465877 SYNMO15061 1565 aa19.66■□□□□ 0.74
COL5A1-206ENST00000465877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.65■□□□□ 0.74
COL5A1-206ENST00000465877 PLA2R1Q13018 1463 aa19.65■□□□□ 0.74
COL5A1-206ENST00000465877 FBXO31Q5XUX0 539 aaPredicted RBP19.64■□□□□ 0.73
COL5A1-206ENST00000465877 UGGT1Q9NYU2 1555 aa19.64■□□□□ 0.73
COL5A1-206ENST00000465877 PIK3C2BO00750 1634 aa19.64■□□□□ 0.73
COL5A1-206ENST00000465877 KDM5AP29375 1690 aaKnown RBP19.62■□□□□ 0.73
COL5A1-206ENST00000465877 RPRD2Q5VT52 1461 aaKnown RBP19.62■□□□□ 0.73
COL5A1-206ENST00000465877 NAIPQ13075 1403 aa19.62■□□□□ 0.73
COL5A1-206ENST00000465877 HFM1A2PYH4 1435 aa19.61■□□□□ 0.73
COL5A1-206ENST00000465877 NEURL4Q96JN8 1562 aa19.59■□□□□ 0.73
COL5A1-206ENST00000465877 SPHKAPQ2M3C7 1700 aa19.59■□□□□ 0.73
COL5A1-206ENST00000465877 MYO5BQ9ULV0 1848 aa19.57■□□□□ 0.72
COL5A1-206ENST00000465877 NOS1P29475 1434 aa19.57■□□□□ 0.72
COL5A1-206ENST00000465877 ADGRB3O60242 1522 aa19.56■□□□□ 0.72
COL5A1-206ENST00000465877 PTPRTO14522 1441 aa19.54■□□□□ 0.72
COL5A1-206ENST00000465877 IQGAP1P46940 1657 aa19.52■□□□□ 0.72
COL5A1-206ENST00000465877 NUP155O75694 1391 aa19.52■□□□□ 0.72
COL5A1-206ENST00000465877 SLIT1O75093 1534 aa19.5■□□□□ 0.71
COL5A1-206ENST00000465877 ARHGAP23Q9P227 1491 aa19.48■□□□□ 0.71
COL5A1-206ENST00000465877 TMEM131LA2VDJ0 1609 aa19.47■□□□□ 0.71
COL5A1-206ENST00000465877 PKD2Q13563 968 aa19.46■□□□□ 0.71
COL5A1-206ENST00000465877 DMRT2Q9Y5R5 561 aa19.46■□□□□ 0.71
COL5A1-206ENST00000465877 MED14O60244 1454 aa19.45■□□□□ 0.7
COL5A1-206ENST00000465877 NCKAP5LQ9HCH0 1330 aa19.45■□□□□ 0.7
COL5A1-206ENST00000465877 TRPM2O94759 1503 aa19.45■□□□□ 0.7
COL5A1-206ENST00000465877 THEMISQ8N1K5 641 aaPredicted RBP19.44■□□□□ 0.7
COL5A1-206ENST00000465877 CLTCL1P53675 1640 aa19.43■□□□□ 0.7
COL5A1-206ENST00000465877 SCAF11Q99590 1463 aaKnown RBP19.43■□□□□ 0.7
COL5A1-206ENST00000465877 LTBP4Q8N2S1 1624 aa19.43■□□□□ 0.7
COL5A1-206ENST00000465877 KIF1BO60333 1816 aa19.41■□□□□ 0.7
COL5A1-206ENST00000465877 NPHP4O75161 1426 aaPredicted RBP19.4■□□□□ 0.7
COL5A1-206ENST00000465877 IDI1Q13907 227 aa19.38■□□□□ 0.69
COL5A1-206ENST00000465877 TMEM2Q9UHN6 1383 aa19.38■□□□□ 0.69
COL5A1-206ENST00000465877 SLC52A1Q9NWF4 448 aa19.37■□□□□ 0.69
COL5A1-206ENST00000465877 SETD5Q9C0A6 1442 aa19.36■□□□□ 0.69
COL5A1-206ENST00000465877 ANKLE2Q86XL3 938 aa19.36■□□□□ 0.69
COL5A1-206ENST00000465877 STRCP1A6NGW2 1772 aa19.36■□□□□ 0.69
COL5A1-206ENST00000465877 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
COL5A1-206ENST00000465877 ZFYVE9O95405 1425 aa19.34■□□□□ 0.69
COL5A1-206ENST00000465877 TRIM52Q96A61 297 aa19.34■□□□□ 0.69
COL5A1-206ENST00000465877 RAB3GAP2Q9H2M9 1393 aa19.32■□□□□ 0.68
COL5A1-206ENST00000465877 CPS1P31327 1500 aa19.3■□□□□ 0.68
COL5A1-206ENST00000465877 ZNF335Q9H4Z2 1342 aaPredicted RBP19.3■□□□□ 0.68
COL5A1-206ENST00000465877 IQSEC2Q5JU85 1478 aa19.3■□□□□ 0.68
COL5A1-206ENST00000465877 RIMS2Q9UQ26 1411 aa19.29■□□□□ 0.68
COL5A1-206ENST00000465877 LTKP29376 864 aa19.29■□□□□ 0.68
COL5A1-206ENST00000465877 SLC4A1APQ9BWU0 796 aaKnown RBP19.29■□□□□ 0.68
COL5A1-206ENST00000465877 NEXMIFQ5QGS0 1516 aa19.27■□□□□ 0.68
COL5A1-206ENST00000465877 ILDR1Q86SU0 546 aaPredicted RBP19.27■□□□□ 0.68
COL5A1-206ENST00000465877 TXNDC2Q86VQ3 553 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms