RNA–Protein interactions for RNA: ENST00000465464.5

ITGB5-204, Transcript of integrin subunit beta 5, humanhuman

TSL 5

Gene ITGB5, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-204ENST00000465464 SETD1BQ9UPS6 1966 aaKnown RBP19.3■□□□□ 0.68
ITGB5-204ENST00000465464 CHIC2Q9UKJ5 165 aa19.29■□□□□ 0.68
ITGB5-204ENST00000465464 NCKAP5LQ9HCH0 1330 aa19.28■□□□□ 0.68
ITGB5-204ENST00000465464 WASHC2CQ9Y4E1 1318 aa19.28■□□□□ 0.68
ITGB5-204ENST00000465464 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
ITGB5-204ENST00000465464 CEP170BQ9Y4F5 1589 aaPredicted RBP19.27■□□□□ 0.68
ITGB5-204ENST00000465464 NCOA1Q15788 1441 aa19.27■□□□□ 0.68
ITGB5-204ENST00000465464 DAPK1P53355 1430 aa19.26■□□□□ 0.67
ITGB5-204ENST00000465464 MROH1Q8NDA8 1641 aa19.25■□□□□ 0.67
ITGB5-204ENST00000465464 KIF15Q9NS87 1388 aa19.25■□□□□ 0.67
ITGB5-204ENST00000465464 DNMT1P26358 1616 aaKnown RBP19.25■□□□□ 0.67
ITGB5-204ENST00000465464 RNF17Q9BXT8 1623 aaKnown RBP19.25■□□□□ 0.67
ITGB5-204ENST00000465464 ZNF142P52746 1687 aaPredicted RBP19.24■□□□□ 0.67
ITGB5-204ENST00000465464 TCOF1Q13428 1488 aaKnown RBP19.24■□□□□ 0.67
ITGB5-204ENST00000465464 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
ITGB5-204ENST00000465464 FBXO41Q8TF61 875 aa19.24■□□□□ 0.67
ITGB5-204ENST00000465464 ABCC3O15438 1527 aa19.24■□□□□ 0.67
ITGB5-204ENST00000465464 CEP152O94986 1710 aa19.23■□□□□ 0.67
ITGB5-204ENST00000465464 PZPP20742 1482 aa19.22■□□□□ 0.67
ITGB5-204ENST00000465464 TNRQ92752 1358 aa19.22■□□□□ 0.67
ITGB5-204ENST00000465464 CERKQ8TCT0 537 aa19.22■□□□□ 0.67
ITGB5-204ENST00000465464 PPP6R1Q9UPN7 881 aa19.22■□□□□ 0.67
ITGB5-204ENST00000465464 DUOX2Q9NRD8 1548 aa19.21■□□□□ 0.67
ITGB5-204ENST00000465464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.21■□□□□ 0.67
ITGB5-204ENST00000465464 EIF2AK4Q9P2K8 1649 aaKnown RBP19.21■□□□□ 0.67
ITGB5-204ENST00000465464 SHANK2Q9UPX8 1470 aa19.21■□□□□ 0.67
ITGB5-204ENST00000465464 A2ML1A8K2U0 1454 aa19.18■□□□□ 0.66
ITGB5-204ENST00000465464 DMRT2Q9Y5R5 561 aa19.18■□□□□ 0.66
ITGB5-204ENST00000465464 PTPRTO14522 1441 aa19.17■□□□□ 0.66
ITGB5-204ENST00000465464 FAM135AQ9P2D6 1515 aa19.15■□□□□ 0.66
ITGB5-204ENST00000465464 ZC3H13Q5T200 1668 aaKnown RBP19.14■□□□□ 0.66
ITGB5-204ENST00000465464 ZNF335Q9H4Z2 1342 aaPredicted RBP19.14■□□□□ 0.65
ITGB5-204ENST00000465464 ERBINQ96RT1 1412 aa19.13■□□□□ 0.65
ITGB5-204ENST00000465464 ERVK-7P63135 1459 aa19.13■□□□□ 0.65
ITGB5-204ENST00000465464 CFAP65Q6ZU64 1925 aaKnown RBP19.13■□□□□ 0.65
ITGB5-204ENST00000465464 LTBP4Q8N2S1 1624 aa19.12■□□□□ 0.65
ITGB5-204ENST00000465464 PRDM15P57071 1507 aaPredicted RBP19.12■□□□□ 0.65
ITGB5-204ENST00000465464 ANKRD30AQ9BXX3 1397 aa19.12■□□□□ 0.65
ITGB5-204ENST00000465464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.12■□□□□ 0.65
ITGB5-204ENST00000465464 PLA2R1Q13018 1463 aa19.11■□□□□ 0.65
ITGB5-204ENST00000465464 ITGAEP38570 1179 aa19.11■□□□□ 0.65
ITGB5-204ENST00000465464 SPATA31D1Q6ZQQ2 1576 aa19.1■□□□□ 0.65
ITGB5-204ENST00000465464 NEURL4Q96JN8 1562 aa19.1■□□□□ 0.65
ITGB5-204ENST00000465464 DEPDC5O75140 1603 aa19.09■□□□□ 0.65
ITGB5-204ENST00000465464 UGGT1Q9NYU2 1555 aa19.09■□□□□ 0.65
ITGB5-204ENST00000465464 POLR1AO95602 1720 aaPredicted RBP19.08■□□□□ 0.64
ITGB5-204ENST00000465464 PKD2Q13563 968 aa19.07■□□□□ 0.64
ITGB5-204ENST00000465464 ADGRL2O95490 1459 aa19.06■□□□□ 0.64
ITGB5-204ENST00000465464 NLRP1Q9C000 1473 aa19.06■□□□□ 0.64
ITGB5-204ENST00000465464 KANK1Q14678 1352 aa19.03■□□□□ 0.64
ITGB5-204ENST00000465464 UBR1Q8IWV7 1749 aa19.01■□□□□ 0.63
ITGB5-204ENST00000465464 THEMISQ8N1K5 641 aaPredicted RBP19.01■□□□□ 0.63
ITGB5-204ENST00000465464 VWDEQ8N2E2 1590 aa19.01■□□□□ 0.63
ITGB5-204ENST00000465464 ANKRD50Q9ULJ7 1429 aa19■□□□□ 0.63
ITGB5-204ENST00000465464 PIK3C2BO00750 1634 aa19■□□□□ 0.63
ITGB5-204ENST00000465464 ANKLE2Q86XL3 938 aa18.99■□□□□ 0.63
ITGB5-204ENST00000465464 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
ITGB5-204ENST00000465464 SYNMO15061 1565 aa18.98■□□□□ 0.63
ITGB5-204ENST00000465464 EFCAB6Q5THR3 1501 aa18.98■□□□□ 0.63
ITGB5-204ENST00000465464 NPHP4O75161 1426 aaPredicted RBP18.98■□□□□ 0.63
ITGB5-204ENST00000465464 ARHGAP31Q2M1Z3 1444 aa18.98■□□□□ 0.63
ITGB5-204ENST00000465464 LMTK2Q8IWU2 1503 aa18.96■□□□□ 0.63
ITGB5-204ENST00000465464 IQGAP1P46940 1657 aa18.95■□□□□ 0.62
ITGB5-204ENST00000465464 LTKP29376 864 aa18.94■□□□□ 0.62
ITGB5-204ENST00000465464 UBAP1LF5GYI3 381 aa18.92■□□□□ 0.62
ITGB5-204ENST00000465464 IDI1Q13907 227 aa18.92■□□□□ 0.62
ITGB5-204ENST00000465464 UNC13BO14795 1591 aa18.92■□□□□ 0.62
ITGB5-204ENST00000465464 MED14O60244 1454 aa18.91■□□□□ 0.62
ITGB5-204ENST00000465464 STAG3Q9UJ98 1225 aa18.91■□□□□ 0.62
ITGB5-204ENST00000465464 SCAF11Q99590 1463 aaKnown RBP18.9■□□□□ 0.62
ITGB5-204ENST00000465464 TXNDC2Q86VQ3 553 aa18.9■□□□□ 0.62
ITGB5-204ENST00000465464 STRCP1A6NGW2 1772 aa18.9■□□□□ 0.62
ITGB5-204ENST00000465464 ROCK1Q13464 1354 aa18.89■□□□□ 0.61
ITGB5-204ENST00000465464 NOS1P29475 1434 aa18.89■□□□□ 0.61
ITGB5-204ENST00000465464 TET3O43151 1660 aa18.89■□□□□ 0.61
ITGB5-204ENST00000465464 ARHGAP23Q9P227 1491 aa18.88■□□□□ 0.61
ITGB5-204ENST00000465464 SLIT1O75093 1534 aa18.87■□□□□ 0.61
ITGB5-204ENST00000465464 IQSEC2Q5JU85 1478 aa18.87■□□□□ 0.61
ITGB5-204ENST00000465464 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
ITGB5-204ENST00000465464 E9PCH4 1651 aa18.86■□□□□ 0.61
ITGB5-204ENST00000465464 ADGRB3O60242 1522 aa18.86■□□□□ 0.61
ITGB5-204ENST00000465464 TMEM2Q9UHN6 1383 aa18.85■□□□□ 0.61
ITGB5-204ENST00000465464 PIP4K2BP78356 416 aa18.85■□□□□ 0.61
ITGB5-204ENST00000465464 GCC2Q8IWJ2 1684 aa18.85■□□□□ 0.61
ITGB5-204ENST00000465464 NUP155O75694 1391 aa18.84■□□□□ 0.61
ITGB5-204ENST00000465464 IQGAP3Q86VI3 1631 aa18.84■□□□□ 0.61
ITGB5-204ENST00000465464 CPS1P31327 1500 aa18.84■□□□□ 0.61
ITGB5-204ENST00000465464 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
ITGB5-204ENST00000465464 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.61
ITGB5-204ENST00000465464 CHGAP10645 457 aaKnown RBP18.83■□□□□ 0.6
ITGB5-204ENST00000465464 EID1Q9Y6B2 187 aa18.82■□□□□ 0.6
ITGB5-204ENST00000465464 NUTM2DQ5VT03 806 aaPredicted RBP18.81■□□□□ 0.6
ITGB5-204ENST00000465464 SLC26A8Q96RN1 970 aa18.81■□□□□ 0.6
ITGB5-204ENST00000465464 RPRD2Q5VT52 1461 aaKnown RBP18.8■□□□□ 0.6
ITGB5-204ENST00000465464 LRRC7Q96NW7 1537 aa18.79■□□□□ 0.6
ITGB5-204ENST00000465464 RBM33Q96EV2 1170 aaKnown RBP18.79■□□□□ 0.6
ITGB5-204ENST00000465464 ALKQ9UM73 1620 aa18.78■□□□□ 0.6
ITGB5-204ENST00000465464 BCANQ96GW7 911 aa18.78■□□□□ 0.6
ITGB5-204ENST00000465464 KDM5AP29375 1690 aaKnown RBP18.77■□□□□ 0.6
ITGB5-204ENST00000465464 TMEM131LA2VDJ0 1609 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms