RNA–Protein interactions for RNA: ENST00000465464.5

ITGB5-204, Transcript of integrin subunit beta 5, humanhuman

TSL 5

Gene ITGB5, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-204ENST00000465464 NISCHQ9Y2I1 1504 aa30.58■■■□□ 2.49
ITGB5-204ENST00000465464 CCDC180Q9P1Z9 1646 aa27.26■■□□□ 1.95
ITGB5-204ENST00000465464 ABCC9O60706 1549 aa27.21■■□□□ 1.95
ITGB5-204ENST00000465464 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
ITGB5-204ENST00000465464 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
ITGB5-204ENST00000465464 NACADO15069 1562 aa25.69■■□□□ 1.7
ITGB5-204ENST00000465464 PABPN1Q86U42 306 aaKnown RBP eCLIP25.42■■□□□ 1.66
ITGB5-204ENST00000465464 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
ITGB5-204ENST00000465464 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
ITGB5-204ENST00000465464 MYO15BQ96JP2 1530 aa25.32■■□□□ 1.64
ITGB5-204ENST00000465464 DNAJC5BQ9UF47 199 aa25.31■■□□□ 1.64
ITGB5-204ENST00000465464 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
ITGB5-204ENST00000465464 DCAF1Q9Y4B6 1507 aa25.14■■□□□ 1.62
ITGB5-204ENST00000465464 SCRIBQ14160 1630 aa25.07■■□□□ 1.6
ITGB5-204ENST00000465464 SHROOM4Q9ULL8 1493 aa24.62■■□□□ 1.53
ITGB5-204ENST00000465464 CC2D2AQ9P2K1 1620 aa24.53■■□□□ 1.52
ITGB5-204ENST00000465464 EIF4G1Q04637 1599 aaKnown RBP24.51■■□□□ 1.51
ITGB5-204ENST00000465464 CECR2Q9BXF3 1484 aa24.41■■□□□ 1.5
ITGB5-204ENST00000465464 SMARCA4P51532 1647 aa23.83■■□□□ 1.41
ITGB5-204ENST00000465464 ATAD2BQ9ULI0 1458 aa23.77■■□□□ 1.4
ITGB5-204ENST00000465464 NCAPD3P42695 1498 aa23.72■■□□□ 1.39
ITGB5-204ENST00000465464 BAZ1AQ9NRL2 1556 aaPredicted RBP23.68■■□□□ 1.38
ITGB5-204ENST00000465464 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
ITGB5-204ENST00000465464 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
ITGB5-204ENST00000465464 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
ITGB5-204ENST00000465464 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
ITGB5-204ENST00000465464 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
ITGB5-204ENST00000465464 NESP48681 1621 aa23.48■■□□□ 1.35
ITGB5-204ENST00000465464 ERCC6Q03468 1493 aa23.42■■□□□ 1.34
ITGB5-204ENST00000465464 WIZO95785 1651 aa23.41■■□□□ 1.34
ITGB5-204ENST00000465464 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
ITGB5-204ENST00000465464 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
ITGB5-204ENST00000465464 CUX2O14529 1486 aa23.16■■□□□ 1.3
ITGB5-204ENST00000465464 KIF21AQ7Z4S6 1674 aa23.14■■□□□ 1.29
ITGB5-204ENST00000465464 THOC2Q8NI27 1593 aaKnown RBP23.1■■□□□ 1.29
ITGB5-204ENST00000465464 CADPSQ9ULU8 1353 aa23.05■■□□□ 1.28
ITGB5-204ENST00000465464 TOP2AP11388 1531 aaKnown RBP23.04■■□□□ 1.28
ITGB5-204ENST00000465464 PDS5BQ9NTI5 1447 aa23.01■■□□□ 1.27
ITGB5-204ENST00000465464 DNAJC5Q9H3Z4 198 aa22.9■■□□□ 1.26
ITGB5-204ENST00000465464 MRC2Q9UBG0 1479 aa22.87■■□□□ 1.25
ITGB5-204ENST00000465464 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
ITGB5-204ENST00000465464 CFTRP13569 1480 aa22.85■■□□□ 1.25
ITGB5-204ENST00000465464 CEP164Q9UPV0 1460 aa22.84■■□□□ 1.25
ITGB5-204ENST00000465464 CCDC88BA6NC98 1476 aa22.81■■□□□ 1.24
ITGB5-204ENST00000465464 WDR62O43379 1518 aa22.79■■□□□ 1.24
ITGB5-204ENST00000465464 URB2Q14146 1524 aaKnown RBP22.69■■□□□ 1.22
ITGB5-204ENST00000465464 PRDM2Q13029 1718 aa22.64■■□□□ 1.21
ITGB5-204ENST00000465464 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
ITGB5-204ENST00000465464 TOPBP1Q92547 1522 aa22.45■■□□□ 1.18
ITGB5-204ENST00000465464 ZNF608Q9ULD9 1512 aaPredicted RBP22.41■■□□□ 1.18
ITGB5-204ENST00000465464 DNMBPQ6XZF7 1577 aa22.37■■□□□ 1.17
ITGB5-204ENST00000465464 IFT140Q96RY7 1462 aa22.32■■□□□ 1.16
ITGB5-204ENST00000465464 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
ITGB5-204ENST00000465464 ABCC8Q09428 1581 aa22.25■■□□□ 1.15
ITGB5-204ENST00000465464 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
ITGB5-204ENST00000465464 RAD54L2Q9Y4B4 1467 aa22.23■■□□□ 1.15
ITGB5-204ENST00000465464 TARBP1Q13395 1621 aaKnown RBP22.23■■□□□ 1.15
ITGB5-204ENST00000465464 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
ITGB5-204ENST00000465464 CUX1P39880 1505 aa22.21■■□□□ 1.15
ITGB5-204ENST00000465464 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
ITGB5-204ENST00000465464 OSCARQ8IYS5 282 aa22.17■■□□□ 1.14
ITGB5-204ENST00000465464 FGD5Q6ZNL6 1462 aa22.16■■□□□ 1.14
ITGB5-204ENST00000465464 SOGA1O94964 1423 aa22.13■■□□□ 1.13
ITGB5-204ENST00000465464 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
ITGB5-204ENST00000465464 CHD1O14646 1710 aa22.06■■□□□ 1.12
ITGB5-204ENST00000465464 FBLN2P98095 1184 aa22.04■■□□□ 1.12
ITGB5-204ENST00000465464 SNAPC4Q5SXM2 1469 aa21.99■■□□□ 1.11
ITGB5-204ENST00000465464 WDR97A6NE52 1622 aa21.97■■□□□ 1.11
ITGB5-204ENST00000465464 RIMBP3CA6NJZ7 1639 aa21.96■■□□□ 1.11
ITGB5-204ENST00000465464 RIMBP3BA6NNM3 1639 aa21.96■■□□□ 1.11
ITGB5-204ENST00000465464 RIMBP3Q9UFD9 1639 aa21.96■■□□□ 1.11
ITGB5-204ENST00000465464 SYNJ1O43426 1573 aa21.93■■□□□ 1.1
ITGB5-204ENST00000465464 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
ITGB5-204ENST00000465464 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
ITGB5-204ENST00000465464 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
ITGB5-204ENST00000465464 WRNQ14191 1432 aaPredicted RBP eCLIP21.88■■□□□ 1.09
ITGB5-204ENST00000465464 GAPVD1Q14C86 1478 aa21.86■■□□□ 1.09
ITGB5-204ENST00000465464 BIVM-ERCC5R4GMW8 1640 aa21.85■■□□□ 1.09
ITGB5-204ENST00000465464 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
ITGB5-204ENST00000465464 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
ITGB5-204ENST00000465464 ABCA5Q8WWZ7 1642 aa21.84■■□□□ 1.09
ITGB5-204ENST00000465464 CHMP7Q8WUX9 453 aaPredicted RBP21.82■■□□□ 1.08
ITGB5-204ENST00000465464 MAGI1Q96QZ7 1491 aaPredicted RBP21.82■■□□□ 1.08
ITGB5-204ENST00000465464 SYNJ2O15056 1496 aa21.77■■□□□ 1.08
ITGB5-204ENST00000465464 CYB5RLQ6IPT4 315 aa21.76■■□□□ 1.07
ITGB5-204ENST00000465464 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
ITGB5-204ENST00000465464 ARAP1Q96P48 1450 aa21.73■■□□□ 1.07
ITGB5-204ENST00000465464 ADAMTS12P58397 1594 aa21.68■■□□□ 1.06
ITGB5-204ENST00000465464 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
ITGB5-204ENST00000465464 CEP170Q5SW79 1584 aa21.6■■□□□ 1.05
ITGB5-204ENST00000465464 ERCC6L2Q5T890 1561 aa21.57■■□□□ 1.04
ITGB5-204ENST00000465464 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
ITGB5-204ENST00000465464 ERICH3Q5RHP9 1530 aa21.55■■□□□ 1.04
ITGB5-204ENST00000465464 NUP160Q12769 1436 aa21.51■■□□□ 1.03
ITGB5-204ENST00000465464 TRHP20396 242 aaPredicted RBP21.45■■□□□ 1.02
ITGB5-204ENST00000465464 KIF27Q86VH2 1401 aa21.4■■□□□ 1.02
ITGB5-204ENST00000465464 IGF1RP08069 1367 aa21.39■■□□□ 1.02
ITGB5-204ENST00000465464 SHROOM2Q13796 1616 aa21.39■■□□□ 1.01
ITGB5-204ENST00000465464 RUSC2Q8N2Y8 1516 aa21.37■■□□□ 1.01
ITGB5-204ENST00000465464 PRG4Q92954 1404 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms