RNA–Protein interactions for RNA: ENST00000463574.1

HLA-B-251, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-251ENST00000463574 ILDR2Q71H61 639 aa19.66■□□□□ 0.74
HLA-B-251ENST00000463574 TCOF1Q13428 1488 aaKnown RBP19.65■□□□□ 0.74
HLA-B-251ENST00000463574 RSPH4AQ5TD94 716 aa19.64■□□□□ 0.73
HLA-B-251ENST00000463574 CCDC141Q6ZP82 1450 aa19.64■□□□□ 0.73
HLA-B-251ENST00000463574 A2ML1A8K2U0 1454 aa19.62■□□□□ 0.73
HLA-B-251ENST00000463574 CAMSAP2Q08AD1 1489 aa19.62■□□□□ 0.73
HLA-B-251ENST00000463574 UBAP1LF5GYI3 381 aa19.62■□□□□ 0.73
HLA-B-251ENST00000463574 FBXO31Q5XUX0 539 aaPredicted RBP19.62■□□□□ 0.73
HLA-B-251ENST00000463574 DNMT1P26358 1616 aaKnown RBP19.61■□□□□ 0.73
HLA-B-251ENST00000463574 TNRQ92752 1358 aa19.6■□□□□ 0.73
HLA-B-251ENST00000463574 WASHC2CQ9Y4E1 1318 aa19.6■□□□□ 0.73
HLA-B-251ENST00000463574 SPATA31D1Q6ZQQ2 1576 aa19.59■□□□□ 0.73
HLA-B-251ENST00000463574 TSPY4P0CV99 314 aa19.59■□□□□ 0.73
HLA-B-251ENST00000463574 TSPY10P0CW01 314 aa19.59■□□□□ 0.73
HLA-B-251ENST00000463574 KDM5DQ9BY66 1539 aa19.57■□□□□ 0.72
HLA-B-251ENST00000463574 MYOM3Q5VTT5 1437 aa19.57■□□□□ 0.72
HLA-B-251ENST00000463574 PZPP20742 1482 aa19.56■□□□□ 0.72
HLA-B-251ENST00000463574 SOCS7O14512 581 aa19.56■□□□□ 0.72
HLA-B-251ENST00000463574 FAM135AQ9P2D6 1515 aa19.55■□□□□ 0.72
HLA-B-251ENST00000463574 POLR1AO95602 1720 aaPredicted RBP19.54■□□□□ 0.72
HLA-B-251ENST00000463574 ARHGEF5Q12774 1597 aa19.54■□□□□ 0.72
HLA-B-251ENST00000463574 PTPN23Q9H3S7 1636 aa19.54■□□□□ 0.72
HLA-B-251ENST00000463574 ANKLE2Q86XL3 938 aa19.52■□□□□ 0.72
HLA-B-251ENST00000463574 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
HLA-B-251ENST00000463574 THEMISQ8N1K5 641 aaPredicted RBP19.51■□□□□ 0.71
HLA-B-251ENST00000463574 NEURL4Q96JN8 1562 aa19.5■□□□□ 0.71
HLA-B-251ENST00000463574 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.5■□□□□ 0.71
HLA-B-251ENST00000463574 CROCC2H7BZ55 1655 aa19.49■□□□□ 0.71
HLA-B-251ENST00000463574 NLRP1Q9C000 1473 aa19.48■□□□□ 0.71
HLA-B-251ENST00000463574 SHANK2Q9UPX8 1470 aa19.48■□□□□ 0.71
HLA-B-251ENST00000463574 UGGT1Q9NYU2 1555 aa19.47■□□□□ 0.71
HLA-B-251ENST00000463574 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
HLA-B-251ENST00000463574 CPS1P31327 1500 aa19.46■□□□□ 0.71
HLA-B-251ENST00000463574 CFAP65Q6ZU64 1925 aaKnown RBP19.45■□□□□ 0.7
HLA-B-251ENST00000463574 FGD6Q6ZV73 1430 aa19.45■□□□□ 0.7
HLA-B-251ENST00000463574 TOM1O60784 492 aa19.45■□□□□ 0.7
HLA-B-251ENST00000463574 PIP4K2BP78356 416 aa19.45■□□□□ 0.7
HLA-B-251ENST00000463574 MAST1Q9Y2H9 1570 aa19.44■□□□□ 0.7
HLA-B-251ENST00000463574 RNF17Q9BXT8 1623 aaKnown RBP19.44■□□□□ 0.7
HLA-B-251ENST00000463574 PPARGC1BQ86YN6 1023 aaKnown RBP19.43■□□□□ 0.7
HLA-B-251ENST00000463574 NPHP4O75161 1426 aaPredicted RBP19.42■□□□□ 0.7
HLA-B-251ENST00000463574 ABCC3O15438 1527 aa19.42■□□□□ 0.7
HLA-B-251ENST00000463574 MED14O60244 1454 aa19.41■□□□□ 0.7
HLA-B-251ENST00000463574 DEPDC5O75140 1603 aa19.41■□□□□ 0.7
HLA-B-251ENST00000463574 ZC3H13Q5T200 1668 aaKnown RBP19.41■□□□□ 0.7
HLA-B-251ENST00000463574 HSPA1LP34931 641 aa19.41■□□□□ 0.7
HLA-B-251ENST00000463574 VWDEQ8N2E2 1590 aa19.4■□□□□ 0.7
HLA-B-251ENST00000463574 EIF2AK4Q9P2K8 1649 aaKnown RBP19.4■□□□□ 0.7
HLA-B-251ENST00000463574 IQGAP1P46940 1657 aa19.38■□□□□ 0.69
HLA-B-251ENST00000463574 ERVK-7P63135 1459 aa19.38■□□□□ 0.69
HLA-B-251ENST00000463574 CEP152O94986 1710 aa19.37■□□□□ 0.69
HLA-B-251ENST00000463574 MROH1Q8NDA8 1641 aa19.36■□□□□ 0.69
HLA-B-251ENST00000463574 DUOX2Q9NRD8 1548 aa19.35■□□□□ 0.69
HLA-B-251ENST00000463574 ABCC5O15440 1437 aa19.35■□□□□ 0.69
HLA-B-251ENST00000463574 DAPK1P53355 1430 aa19.35■□□□□ 0.69
HLA-B-251ENST00000463574 FAM50AQ14320 339 aaKnown RBP19.33■□□□□ 0.68
HLA-B-251ENST00000463574 RRP7BPQ9NSQ0 103 aa19.33■□□□□ 0.68
HLA-B-251ENST00000463574 STRCP1A6NGW2 1772 aa19.32■□□□□ 0.68
HLA-B-251ENST00000463574 KIF15Q9NS87 1388 aa19.32■□□□□ 0.68
HLA-B-251ENST00000463574 UBR1Q8IWV7 1749 aa19.31■□□□□ 0.68
HLA-B-251ENST00000463574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.68
HLA-B-251ENST00000463574 MED1Q15648 1581 aaPredicted RBP19.3■□□□□ 0.68
HLA-B-251ENST00000463574 TXNDC2Q86VQ3 553 aa19.29■□□□□ 0.68
HLA-B-251ENST00000463574 LRRC7Q96NW7 1537 aa19.29■□□□□ 0.68
HLA-B-251ENST00000463574 ALKQ9UM73 1620 aa19.29■□□□□ 0.68
HLA-B-251ENST00000463574 CHIC2Q9UKJ5 165 aa19.28■□□□□ 0.68
HLA-B-251ENST00000463574 SCAF11Q99590 1463 aaKnown RBP19.28■□□□□ 0.68
HLA-B-251ENST00000463574 ARHGAP31Q2M1Z3 1444 aa19.27■□□□□ 0.68
HLA-B-251ENST00000463574 ERBINQ96RT1 1412 aa19.27■□□□□ 0.68
HLA-B-251ENST00000463574 LTKP29376 864 aa19.27■□□□□ 0.68
HLA-B-251ENST00000463574 SENP3Q9H4L4 574 aaPredicted RBP19.27■□□□□ 0.68
HLA-B-251ENST00000463574 PRDM15P57071 1507 aaPredicted RBP19.26■□□□□ 0.67
HLA-B-251ENST00000463574 SYNMO15061 1565 aa19.25■□□□□ 0.67
HLA-B-251ENST00000463574 EID1Q9Y6B2 187 aa19.25■□□□□ 0.67
HLA-B-251ENST00000463574 ARHGAP23Q9P227 1491 aa19.24■□□□□ 0.67
HLA-B-251ENST00000463574 KANK1Q14678 1352 aa19.24■□□□□ 0.67
HLA-B-251ENST00000463574 STAG3Q9UJ98 1225 aa19.24■□□□□ 0.67
HLA-B-251ENST00000463574 SLIT1O75093 1534 aa19.24■□□□□ 0.67
HLA-B-251ENST00000463574 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
HLA-B-251ENST00000463574 PIK3C2BO00750 1634 aa19.22■□□□□ 0.67
HLA-B-251ENST00000463574 ANKRD30AQ9BXX3 1397 aa19.21■□□□□ 0.67
HLA-B-251ENST00000463574 ADGRL2O95490 1459 aa19.2■□□□□ 0.66
HLA-B-251ENST00000463574 TMEM2Q9UHN6 1383 aa19.19■□□□□ 0.66
HLA-B-251ENST00000463574 ITGAEP38570 1179 aa19.18■□□□□ 0.66
HLA-B-251ENST00000463574 IDI1Q13907 227 aa19.18■□□□□ 0.66
HLA-B-251ENST00000463574 XIRP1Q702N8 1843 aaKnown RBP19.17■□□□□ 0.66
HLA-B-251ENST00000463574 EFCAB6Q5THR3 1501 aa19.15■□□□□ 0.66
HLA-B-251ENST00000463574 LMTK2Q8IWU2 1503 aa19.15■□□□□ 0.66
HLA-B-251ENST00000463574 RRBP1Q9P2E9 1410 aaKnown RBP19.14■□□□□ 0.65
HLA-B-251ENST00000463574 KDM5AP29375 1690 aaKnown RBP19.14■□□□□ 0.65
HLA-B-251ENST00000463574 SLC26A8Q96RN1 970 aa19.13■□□□□ 0.65
HLA-B-251ENST00000463574 KCNA6P17658 529 aa19.11■□□□□ 0.65
HLA-B-251ENST00000463574 NOS1P29475 1434 aa19.1■□□□□ 0.65
HLA-B-251ENST00000463574 ANKRD50Q9ULJ7 1429 aa19.09■□□□□ 0.65
HLA-B-251ENST00000463574 TMEM94Q12767 1356 aa19.09■□□□□ 0.65
HLA-B-251ENST00000463574 PROSER2Q86WR7 435 aaPredicted RBP19.09■□□□□ 0.65
HLA-B-251ENST00000463574 BCANQ96GW7 911 aa19.09■□□□□ 0.65
HLA-B-251ENST00000463574 SLC52A1Q9NWF4 448 aa19.09■□□□□ 0.65
HLA-B-251ENST00000463574 TET3O43151 1660 aa19.08■□□□□ 0.65
HLA-B-251ENST00000463574 RBM33Q96EV2 1170 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms