RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 DHX29Q7Z478 1369 aaKnown RBP22.27■■□□□ 1.16
PABPC4-208ENST00000461578 TNRQ92752 1358 aa22.27■■□□□ 1.16
PABPC4-208ENST00000461578 MED1Q15648 1581 aaPredicted RBP22.27■■□□□ 1.16
PABPC4-208ENST00000461578 NEURL4Q96JN8 1562 aa22.27■■□□□ 1.16
PABPC4-208ENST00000461578 KIF3BO15066 747 aa22.26■■□□□ 1.15
PABPC4-208ENST00000461578 RTEL1-TNFRSF6BF6WH68 1400 aa22.25■■□□□ 1.15
PABPC4-208ENST00000461578 TOM1O60784 492 aa22.25■■□□□ 1.15
PABPC4-208ENST00000461578 CPS1P31327 1500 aa22.25■■□□□ 1.15
PABPC4-208ENST00000461578 SHANK2Q9UPX8 1470 aa22.24■■□□□ 1.15
PABPC4-208ENST00000461578 EHBP1L1Q8N3D4 1523 aa22.24■■□□□ 1.15
PABPC4-208ENST00000461578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.23■■□□□ 1.15
PABPC4-208ENST00000461578 PZPP20742 1482 aa22.22■■□□□ 1.15
PABPC4-208ENST00000461578 KDM5DQ9BY66 1539 aa22.22■■□□□ 1.15
PABPC4-208ENST00000461578 ANKLE2Q86XL3 938 aa22.2■■□□□ 1.14
PABPC4-208ENST00000461578 WASHC2CQ9Y4E1 1318 aa22.2■■□□□ 1.14
PABPC4-208ENST00000461578 CCDC141Q6ZP82 1450 aa22.19■■□□□ 1.14
PABPC4-208ENST00000461578 CEP162Q5TB80 1403 aa22.18■■□□□ 1.14
PABPC4-208ENST00000461578 VWDEQ8N2E2 1590 aa22.17■■□□□ 1.14
PABPC4-208ENST00000461578 CAMSAP2Q08AD1 1489 aa22.16■■□□□ 1.14
PABPC4-208ENST00000461578 THEMISQ8N1K5 641 aaPredicted RBP22.16■■□□□ 1.14
PABPC4-208ENST00000461578 SENP3Q9H4L4 574 aaPredicted RBP22.16■■□□□ 1.14
PABPC4-208ENST00000461578 UGGT1Q9NYU2 1555 aa22.16■■□□□ 1.14
PABPC4-208ENST00000461578 NPHP4O75161 1426 aaPredicted RBP22.15■■□□□ 1.14
PABPC4-208ENST00000461578 MIA2Q96PC5 1412 aa22.15■■□□□ 1.14
PABPC4-208ENST00000461578 FAM135AQ9P2D6 1515 aa22.15■■□□□ 1.14
PABPC4-208ENST00000461578 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
PABPC4-208ENST00000461578 NLRP1Q9C000 1473 aa22.13■■□□□ 1.13
PABPC4-208ENST00000461578 ALKQ9UM73 1620 aa22.12■■□□□ 1.13
PABPC4-208ENST00000461578 NCOA2Q15596 1464 aa22.11■■□□□ 1.13
PABPC4-208ENST00000461578 DEPDC5O75140 1603 aa22.11■■□□□ 1.13
PABPC4-208ENST00000461578 IQGAP1P46940 1657 aa22.11■■□□□ 1.13
PABPC4-208ENST00000461578 MED14O60244 1454 aa22.09■■□□□ 1.13
PABPC4-208ENST00000461578 RSPH4AQ5TD94 716 aa22.08■■□□□ 1.13
PABPC4-208ENST00000461578 STRCP1A6NGW2 1772 aa22.07■■□□□ 1.12
PABPC4-208ENST00000461578 TSPY4P0CV99 314 aa22.06■■□□□ 1.12
PABPC4-208ENST00000461578 TSPY10P0CW01 314 aa22.06■■□□□ 1.12
PABPC4-208ENST00000461578 ARHGEF5Q12774 1597 aa22.04■■□□□ 1.12
PABPC4-208ENST00000461578 LRRC7Q96NW7 1537 aa22.04■■□□□ 1.12
PABPC4-208ENST00000461578 ABCC3O15438 1527 aa22.02■■□□□ 1.12
PABPC4-208ENST00000461578 RNF17Q9BXT8 1623 aaKnown RBP22.02■■□□□ 1.11
PABPC4-208ENST00000461578 ERVK-7P63135 1459 aa22■■□□□ 1.11
PABPC4-208ENST00000461578 ZC3H13Q5T200 1668 aaKnown RBP22■■□□□ 1.11
PABPC4-208ENST00000461578 SYNMO15061 1565 aa21.99■■□□□ 1.11
PABPC4-208ENST00000461578 CFAP65Q6ZU64 1925 aaKnown RBP21.99■■□□□ 1.11
PABPC4-208ENST00000461578 CEP152O94986 1710 aa21.97■■□□□ 1.11
PABPC4-208ENST00000461578 UBR1Q8IWV7 1749 aa21.95■■□□□ 1.1
PABPC4-208ENST00000461578 MAST1Q9Y2H9 1570 aa21.95■■□□□ 1.1
PABPC4-208ENST00000461578 MROH1Q8NDA8 1641 aa21.95■■□□□ 1.1
PABPC4-208ENST00000461578 EIF2AK4Q9P2K8 1649 aaKnown RBP21.94■■□□□ 1.1
PABPC4-208ENST00000461578 SCAF11Q99590 1463 aaKnown RBP21.93■■□□□ 1.1
PABPC4-208ENST00000461578 LTKP29376 864 aa21.91■■□□□ 1.1
PABPC4-208ENST00000461578 TXNDC2Q86VQ3 553 aa21.9■■□□□ 1.1
PABPC4-208ENST00000461578 LRRC9Q6ZRR7 1453 aa21.9■■□□□ 1.1
PABPC4-208ENST00000461578 XIRP1Q702N8 1843 aaKnown RBP21.88■■□□□ 1.09
PABPC4-208ENST00000461578 RGS17Q9UGC6 210 aaPredicted RBP21.88■■□□□ 1.09
PABPC4-208ENST00000461578 ARHGAP23Q9P227 1491 aa21.86■■□□□ 1.09
PABPC4-208ENST00000461578 SLIT1O75093 1534 aa21.85■■□□□ 1.09
PABPC4-208ENST00000461578 DUOX2Q9NRD8 1548 aa21.85■■□□□ 1.09
PABPC4-208ENST00000461578 EID1Q9Y6B2 187 aa21.84■■□□□ 1.09
PABPC4-208ENST00000461578 KANK4Q5T7N3 995 aaPredicted RBP21.83■■□□□ 1.09
PABPC4-208ENST00000461578 PIK3C2BO00750 1634 aa21.82■■□□□ 1.08
PABPC4-208ENST00000461578 MYOM3Q5VTT5 1437 aa21.81■■□□□ 1.08
PABPC4-208ENST00000461578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.81■■□□□ 1.08
PABPC4-208ENST00000461578 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
PABPC4-208ENST00000461578 KIF15Q9NS87 1388 aa21.8■■□□□ 1.08
PABPC4-208ENST00000461578 STAG3Q9UJ98 1225 aa21.8■■□□□ 1.08
PABPC4-208ENST00000461578 PRDM15P57071 1507 aaPredicted RBP21.8■■□□□ 1.08
PABPC4-208ENST00000461578 RRP7BPQ9NSQ0 103 aa21.79■■□□□ 1.08
PABPC4-208ENST00000461578 ARHGAP31Q2M1Z3 1444 aa21.79■■□□□ 1.08
PABPC4-208ENST00000461578 TMEM2Q9UHN6 1383 aa21.77■■□□□ 1.08
PABPC4-208ENST00000461578 FAM135BQ49AJ0 1406 aa21.77■■□□□ 1.08
PABPC4-208ENST00000461578 TMEM94Q12767 1356 aa21.76■■□□□ 1.07
PABPC4-208ENST00000461578 RBM33Q96EV2 1170 aaKnown RBP21.76■■□□□ 1.07
PABPC4-208ENST00000461578 ERBINQ96RT1 1412 aa21.75■■□□□ 1.07
PABPC4-208ENST00000461578 POTEAQ6S8J7 498 aa21.75■■□□□ 1.07
PABPC4-208ENST00000461578 CROCC2H7BZ55 1655 aa21.75■■□□□ 1.07
PABPC4-208ENST00000461578 ROBO1Q9Y6N7 1651 aa21.74■■□□□ 1.07
PABPC4-208ENST00000461578 SLC26A8Q96RN1 970 aa21.73■■□□□ 1.07
PABPC4-208ENST00000461578 EFCAB6Q5THR3 1501 aa21.73■■□□□ 1.07
PABPC4-208ENST00000461578 ABCC5O15440 1437 aa21.72■■□□□ 1.07
PABPC4-208ENST00000461578 PROSER2Q86WR7 435 aaPredicted RBP21.72■■□□□ 1.07
PABPC4-208ENST00000461578 KANK1Q14678 1352 aa21.72■■□□□ 1.07
PABPC4-208ENST00000461578 KCNA6P17658 529 aa21.71■■□□□ 1.07
PABPC4-208ENST00000461578 IDI1Q13907 227 aa21.71■■□□□ 1.07
PABPC4-208ENST00000461578 MAP3K1Q13233 1512 aa21.7■■□□□ 1.07
PABPC4-208ENST00000461578 LOC105371045A0A1W2PR82 267 aa21.69■■□□□ 1.06
PABPC4-208ENST00000461578 PTPN23Q9H3S7 1636 aa21.69■■□□□ 1.06
PABPC4-208ENST00000461578 TET3O43151 1660 aa21.67■■□□□ 1.06
PABPC4-208ENST00000461578 KDM5AP29375 1690 aaKnown RBP21.67■■□□□ 1.06
PABPC4-208ENST00000461578 DAPK1P53355 1430 aa21.66■■□□□ 1.06
PABPC4-208ENST00000461578 BCANQ96GW7 911 aa21.66■■□□□ 1.06
PABPC4-208ENST00000461578 CHIC2Q9UKJ5 165 aa21.66■■□□□ 1.06
PABPC4-208ENST00000461578 SETD1AO15047 1707 aaKnown RBP21.64■■□□□ 1.06
PABPC4-208ENST00000461578 ADGRB3O60242 1522 aa21.63■■□□□ 1.05
PABPC4-208ENST00000461578 LMTK2Q8IWU2 1503 aa21.63■■□□□ 1.05
PABPC4-208ENST00000461578 MSH6P52701 1360 aa21.62■■□□□ 1.05
PABPC4-208ENST00000461578 NWD1Q149M9 1564 aa21.62■■□□□ 1.05
PABPC4-208ENST00000461578 PHLPP1O60346 1717 aa21.62■■□□□ 1.05
PABPC4-208ENST00000461578 NKTRP30414 1462 aaKnown RBP21.62■■□□□ 1.05
PABPC4-208ENST00000461578 NOS1P29475 1434 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms