RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ATP10AO60312 1499 aa17.27■□□□□ 0.35
ECHDC1-209ENST00000454591 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
ECHDC1-209ENST00000454591 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
ECHDC1-209ENST00000454591 ARAP3Q8WWN8 1544 aa17.25■□□□□ 0.35
ECHDC1-209ENST00000454591 ZBED9Q6R2W3 1325 aa17.25■□□□□ 0.35
ECHDC1-209ENST00000454591 ARHGAP5Q13017 1502 aa17.24■□□□□ 0.35
ECHDC1-209ENST00000454591 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
ECHDC1-209ENST00000454591 HNRNPMP52272 730 aaKnown RBP eCLIP17.23■□□□□ 0.353e-8■■■■■ 29
ECHDC1-209ENST00000454591 KTN1Q86UP2 1357 aaKnown RBP17.23■□□□□ 0.35
ECHDC1-209ENST00000454591 ZCCHC11Q5TAX3 1644 aaKnown RBP17.21■□□□□ 0.35
ECHDC1-209ENST00000454591 ERBINQ96RT1 1412 aa17.21■□□□□ 0.35
ECHDC1-209ENST00000454591 GPRASP1Q5JY77 1395 aa17.21■□□□□ 0.35
ECHDC1-209ENST00000454591 CCDC184Q52MB2 194 aa17.21■□□□□ 0.34
ECHDC1-209ENST00000454591 ERCC6L2Q5T890 1561 aa17.2■□□□□ 0.34
ECHDC1-209ENST00000454591 PLCH2O75038 1416 aa17.2■□□□□ 0.34
ECHDC1-209ENST00000454591 EIF2AK4Q9P2K8 1649 aaKnown RBP17.19■□□□□ 0.34
ECHDC1-209ENST00000454591 MRS2Q9HD23 443 aa17.19■□□□□ 0.34
ECHDC1-209ENST00000454591 PLA2R1Q13018 1463 aa17.19■□□□□ 0.34
ECHDC1-209ENST00000454591 PRAG1Q86YV5 1406 aa17.18■□□□□ 0.34
ECHDC1-209ENST00000454591 ABCC1P33527 1531 aa17.18■□□□□ 0.34
ECHDC1-209ENST00000454591 CCDC144AA2RUR9 1427 aa17.16■□□□□ 0.34
ECHDC1-209ENST00000454591 PRDM15P57071 1507 aaPredicted RBP17.15■□□□□ 0.34
ECHDC1-209ENST00000454591 RTEL1-TNFRSF6BF6WH68 1400 aa17.14■□□□□ 0.33
ECHDC1-209ENST00000454591 RNF17Q9BXT8 1623 aaKnown RBP17.13■□□□□ 0.33
ECHDC1-209ENST00000454591 BCANQ96GW7 911 aa17.13■□□□□ 0.33
ECHDC1-209ENST00000454591 CARD11Q9BXL7 1154 aa17.13■□□□□ 0.33
ECHDC1-209ENST00000454591 A2MP01023 1474 aa17.13■□□□□ 0.33
ECHDC1-209ENST00000454591 SMG6Q86US8 1419 aaKnown RBP17.12■□□□□ 0.33
ECHDC1-209ENST00000454591 DEPDC5O75140 1603 aa17.11■□□□□ 0.33
ECHDC1-209ENST00000454591 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
ECHDC1-209ENST00000454591 NEURL4Q96JN8 1562 aa17.09■□□□□ 0.33
ECHDC1-209ENST00000454591 LRPPRCP42704 1394 aaKnown RBP17.09■□□□□ 0.33
ECHDC1-209ENST00000454591 COL17A1Q9UMD9 1497 aaPredicted RBP17.08■□□□□ 0.32
ECHDC1-209ENST00000454591 ZMYM4Q5VZL5 1548 aa17.08■□□□□ 0.32
ECHDC1-209ENST00000454591 RALBP1Q15311 655 aa17.07■□□□□ 0.32
ECHDC1-209ENST00000454591 EFCAB2Q5VUJ9 269 aa17.07■□□□□ 0.32
ECHDC1-209ENST00000454591 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
ECHDC1-209ENST00000454591 DCAF11Q8TEB1 546 aa17.07■□□□□ 0.32
ECHDC1-209ENST00000454591 INSRP06213 1382 aa17.07■□□□□ 0.32
ECHDC1-209ENST00000454591 ZNF326Q5BKZ1 582 aaKnown RBP17.06■□□□□ 0.32
ECHDC1-209ENST00000454591 RNF123Q5XPI4 1314 aa17.06■□□□□ 0.32
ECHDC1-209ENST00000454591 ABCA9Q8IUA7 1624 aa17.06■□□□□ 0.32
ECHDC1-209ENST00000454591 ST20-MTHFSA0A0A6YYL1 179 aa17.06■□□□□ 0.32
ECHDC1-209ENST00000454591 ZFYVE16Q7Z3T8 1539 aa17.06■□□□□ 0.32
ECHDC1-209ENST00000454591 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
ECHDC1-209ENST00000454591 VWDEQ8N2E2 1590 aa17.05■□□□□ 0.32
ECHDC1-209ENST00000454591 WDR7Q9Y4E6 1490 aa17.05■□□□□ 0.32
ECHDC1-209ENST00000454591 WASHC2CQ9Y4E1 1318 aa17.05■□□□□ 0.32
ECHDC1-209ENST00000454591 CEP152O94986 1710 aa17.04■□□□□ 0.32
ECHDC1-209ENST00000454591 INO80Q9ULG1 1556 aaPredicted RBP17.04■□□□□ 0.32
ECHDC1-209ENST00000454591 TRPM2O94759 1503 aa17.04■□□□□ 0.32
ECHDC1-209ENST00000454591 PNISRQ8TF01 805 aaKnown RBP17.04■□□□□ 0.32
ECHDC1-209ENST00000454591 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
ECHDC1-209ENST00000454591 MYBBP1AQ9BQG0 1328 aaKnown RBP17.03■□□□□ 0.32
ECHDC1-209ENST00000454591 SPHKAPQ2M3C7 1700 aa17.03■□□□□ 0.32
ECHDC1-209ENST00000454591 TET3O43151 1660 aa17.03■□□□□ 0.32
ECHDC1-209ENST00000454591 PTPRTO14522 1441 aa17.03■□□□□ 0.32
ECHDC1-209ENST00000454591 PARD3Q8TEW0 1356 aa17.02■□□□□ 0.32
ECHDC1-209ENST00000454591 TRAPPC8Q9Y2L5 1435 aa17.02■□□□□ 0.31
ECHDC1-209ENST00000454591 IQGAP1P46940 1657 aa17.02■□□□□ 0.31
ECHDC1-209ENST00000454591 MADDQ8WXG6 1647 aa17.01■□□□□ 0.31
ECHDC1-209ENST00000454591 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
ECHDC1-209ENST00000454591 NUDCQ9Y266 331 aa17■□□□□ 0.31
ECHDC1-209ENST00000454591 KDM2AQ9Y2K7 1162 aa17■□□□□ 0.31
ECHDC1-209ENST00000454591 RBM19Q9Y4C8 960 aaKnown RBP16.99■□□□□ 0.31
ECHDC1-209ENST00000454591 TESK2Q96S53 571 aa16.97■□□□□ 0.31
ECHDC1-209ENST00000454591 SCAPERQ9BY12 1400 aa16.97■□□□□ 0.31
ECHDC1-209ENST00000454591 PER1O15534 1290 aaPredicted RBP16.96■□□□□ 0.31
ECHDC1-209ENST00000454591 ATP7AQ04656 1500 aa16.96■□□□□ 0.31
ECHDC1-209ENST00000454591 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
ECHDC1-209ENST00000454591 NLRP13Q86W25 1043 aa16.94■□□□□ 0.3
ECHDC1-209ENST00000454591 CLTCL1P53675 1640 aa16.94■□□□□ 0.3
ECHDC1-209ENST00000454591 SPAG9O60271 1321 aaKnown RBP16.94■□□□□ 0.3
ECHDC1-209ENST00000454591 NBPF1Q3BBV0 1214 aa16.93■□□□□ 0.3
ECHDC1-209ENST00000454591 FANCIQ9NVI1 1328 aa16.92■□□□□ 0.3
ECHDC1-209ENST00000454591 MROH1Q8NDA8 1641 aa16.92■□□□□ 0.3
ECHDC1-209ENST00000454591 DISP3Q9P2K9 1392 aa16.91■□□□□ 0.3
ECHDC1-209ENST00000454591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.32e-7■■■□□ 17
ECHDC1-209ENST00000454591 POLR3GLQ9BT43 218 aa16.91■□□□□ 0.3
ECHDC1-209ENST00000454591 FANCAO15360 1455 aa16.9■□□□□ 0.3
ECHDC1-209ENST00000454591 LMTK2Q8IWU2 1503 aa16.9■□□□□ 0.3
ECHDC1-209ENST00000454591 SYNMO15061 1565 aa16.89■□□□□ 0.29
ECHDC1-209ENST00000454591 IRX6P78412 446 aaPredicted RBP16.89■□□□□ 0.29
ECHDC1-209ENST00000454591 PDE3BQ13370 1112 aa16.89■□□□□ 0.29
ECHDC1-209ENST00000454591 ANP32EQ9BTT0 268 aa16.89■□□□□ 0.29
ECHDC1-209ENST00000454591 MYOM2P54296 1465 aa16.88■□□□□ 0.29
ECHDC1-209ENST00000454591 TMF1P82094 1093 aa16.88■□□□□ 0.29
ECHDC1-209ENST00000454591 IFT172Q9UG01 1749 aa16.88■□□□□ 0.29
ECHDC1-209ENST00000454591 BLMP54132 1417 aaPredicted RBP16.88■□□□□ 0.29
ECHDC1-209ENST00000454591 SCAF11Q99590 1463 aaKnown RBP16.88■□□□□ 0.29
ECHDC1-209ENST00000454591 RGL3Q3MIN7 710 aa16.87■□□□□ 0.29
ECHDC1-209ENST00000454591 KANK1Q14678 1352 aa16.86■□□□□ 0.29
ECHDC1-209ENST00000454591 CFAP74Q9C0B2 1584 aa16.85■□□□□ 0.29
ECHDC1-209ENST00000454591 EFCAB6Q5THR3 1501 aa16.85■□□□□ 0.29
ECHDC1-209ENST00000454591 KIDINS220Q9ULH0 1771 aa16.85■□□□□ 0.29
ECHDC1-209ENST00000454591 ADGRL1O94910 1474 aa16.84■□□□□ 0.29
ECHDC1-209ENST00000454591 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
ECHDC1-209ENST00000454591 DNAJC5Q9H3Z4 198 aa16.84■□□□□ 0.29
ECHDC1-209ENST00000454591 KIF1BO60333 1816 aa16.83■□□□□ 0.29
ECHDC1-209ENST00000454591 MYOM1P52179 1685 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms