RNA–Protein interactions for RNA: ENST00000453208.5

GGA1-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 5

Gene GGA1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-215	ENST00000453208	HSPA1L	P34931	641 aa		29.46	■■■□□ 2.31
GGA1-215	ENST00000453208	DHX29	Q7Z478	1369 aa	Known RBP	29.45	■■■□□ 2.31
GGA1-215	ENST00000453208	ADGB	Q8N7X0	1667 aa		29.44	■■■□□ 2.3
GGA1-215	ENST00000453208	TNR	Q92752	1358 aa		29.41	■■■□□ 2.3
GGA1-215	ENST00000453208	KIF3B	O15066	747 aa		29.41	■■■□□ 2.3
GGA1-215	ENST00000453208	PIP4K2B	P78356	416 aa		29.41	■■■□□ 2.3
GGA1-215	ENST00000453208	MAP3K1	Q13233	1512 aa		29.4	■■■□□ 2.3
GGA1-215	ENST00000453208	RTEL1-TNFRSF6B	F6WH68	1400 aa		29.4	■■■□□ 2.3
GGA1-215	ENST00000453208	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	29.38	■■■□□ 2.29
GGA1-215	ENST00000453208	SCAF1	Q9H7N4	1312 aa	Known RBP	29.37	■■■□□ 2.29
GGA1-215	ENST00000453208	ALK	Q9UM73	1620 aa		29.36	■■■□□ 2.29
GGA1-215	ENST00000453208	PZP	P20742	1482 aa		29.36	■■■□□ 2.29
GGA1-215	ENST00000453208	SHANK2	Q9UPX8	1470 aa		29.36	■■■□□ 2.29
GGA1-215	ENST00000453208	LRRC9	Q6ZRR7	1453 aa		29.34	■■■□□ 2.29
GGA1-215	ENST00000453208	VWDE	Q8N2E2	1590 aa		29.33	■■■□□ 2.29
GGA1-215	ENST00000453208	MED1	Q15648	1581 aa	Predicted RBP	29.32	■■■□□ 2.28
GGA1-215	ENST00000453208	KDM5D	Q9BY66	1539 aa		29.31	■■■□□ 2.28
GGA1-215	ENST00000453208	CAMSAP2	Q08AD1	1489 aa		29.31	■■■□□ 2.28
GGA1-215	ENST00000453208	NCOA2	Q15596	1464 aa		29.31	■■■□□ 2.28
GGA1-215	ENST00000453208	CCDC141	Q6ZP82	1450 aa		29.31	■■■□□ 2.28
GGA1-215	ENST00000453208	POLR1A	O95602	1720 aa	Predicted RBP	29.28	■■■□□ 2.28
GGA1-215	ENST00000453208	MIA2	Q96PC5	1412 aa		29.28	■■■□□ 2.28
GGA1-215	ENST00000453208	WASHC2C	Q9Y4E1	1318 aa		29.27	■■■□□ 2.28
GGA1-215	ENST00000453208	CPS1	P31327	1500 aa		29.27	■■■□□ 2.28
GGA1-215	ENST00000453208	NPHP4	O75161	1426 aa	Predicted RBP	29.23	■■■□□ 2.27
GGA1-215	ENST00000453208	ANKLE2	Q86XL3	938 aa		29.23	■■■□□ 2.27
GGA1-215	ENST00000453208	TOM1	O60784	492 aa		29.22	■■■□□ 2.27
GGA1-215	ENST00000453208	KANK4	Q5T7N3	995 aa	Predicted RBP	29.22	■■■□□ 2.27
GGA1-215	ENST00000453208	SENP3	Q9H4L4	574 aa	Predicted RBP	29.22	■■■□□ 2.27
GGA1-215	ENST00000453208	UGGT1	Q9NYU2	1555 aa		29.21	■■■□□ 2.27
GGA1-215	ENST00000453208	MED14	O60244	1454 aa		29.2	■■■□□ 2.26
GGA1-215	ENST00000453208	NLRP1	Q9C000	1473 aa		29.18	■■■□□ 2.26
GGA1-215	ENST00000453208	APLP2	Q06481	763 aa		29.18	■■■□□ 2.26
GGA1-215	ENST00000453208	STRCP1	A6NGW2	1772 aa		29.18	■■■□□ 2.26
GGA1-215	ENST00000453208	THEMIS	Q8N1K5	641 aa	Predicted RBP	29.17	■■■□□ 2.26
GGA1-215	ENST00000453208	FAM135A	Q9P2D6	1515 aa		29.15	■■■□□ 2.26
GGA1-215	ENST00000453208	ABCC3	O15438	1527 aa		29.15	■■■□□ 2.26
GGA1-215	ENST00000453208	LRRC7	Q96NW7	1537 aa		29.13	■■■□□ 2.25
GGA1-215	ENST00000453208	DEPDC5	O75140	1603 aa		29.12	■■■□□ 2.25
GGA1-215	ENST00000453208	ARHGEF5	Q12774	1597 aa		29.12	■■■□□ 2.25
GGA1-215	ENST00000453208	MROH1	Q8NDA8	1641 aa		29.1	■■■□□ 2.25
GGA1-215	ENST00000453208	ERVK-7	P63135	1459 aa		29.1	■■■□□ 2.25
GGA1-215	ENST00000453208	RSPH4A	Q5TD94	716 aa		29.09	■■■□□ 2.25
GGA1-215	ENST00000453208	IQGAP1	P46940	1657 aa		29.09	■■■□□ 2.25
GGA1-215	ENST00000453208	RNF17	Q9BXT8	1623 aa	Known RBP	29.08	■■■□□ 2.25
GGA1-215	ENST00000453208	MYOM3	Q5VTT5	1437 aa		29.07	■■■□□ 2.24
GGA1-215	ENST00000453208	TSPY4	P0CV99	314 aa		29.05	■■■□□ 2.24
GGA1-215	ENST00000453208	TSPY10	P0CW01	314 aa		29.05	■■■□□ 2.24
GGA1-215	ENST00000453208	LTK	P29376	864 aa		29.03	■■■□□ 2.24
GGA1-215	ENST00000453208	ZC3H13	Q5T200	1668 aa	Known RBP	29.01	■■■□□ 2.23
GGA1-215	ENST00000453208	RGS17	Q9UGC6	210 aa	Predicted RBP	29	■■■□□ 2.23
GGA1-215	ENST00000453208	MAST1	Q9Y2H9	1570 aa		29	■■■□□ 2.23
GGA1-215	ENST00000453208	PHF23	Q9BUL5	403 aa	Predicted RBP	28.99	■■■□□ 2.23
GGA1-215	ENST00000453208	CEP152	O94986	1710 aa		28.96	■■■□□ 2.23
GGA1-215	ENST00000453208	UBR1	Q8IWV7	1749 aa		28.95	■■■□□ 2.23
GGA1-215	ENST00000453208	SCAF11	Q99590	1463 aa	Known RBP	28.94	■■■□□ 2.22
GGA1-215	ENST00000453208	ARHGAP23	Q9P227	1491 aa		28.93	■■■□□ 2.22
GGA1-215	ENST00000453208	SYNM	O15061	1565 aa		28.92	■■■□□ 2.22
GGA1-215	ENST00000453208	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.91	■■■□□ 2.22
GGA1-215	ENST00000453208	TXNDC2	Q86VQ3	553 aa		28.9	■■■□□ 2.22
GGA1-215	ENST00000453208	CFAP65	Q6ZU64	1925 aa	Known RBP	28.89	■■■□□ 2.22
GGA1-215	ENST00000453208	FGD6	Q6ZV73	1430 aa		28.89	■■■□□ 2.22
GGA1-215	ENST00000453208	SLIT1	O75093	1534 aa		28.88	■■■□□ 2.21
GGA1-215	ENST00000453208	PTPN23	Q9H3S7	1636 aa		28.87	■■■□□ 2.21
GGA1-215	ENST00000453208	XIRP1	Q702N8	1843 aa	Known RBP	28.86	■■■□□ 2.21
GGA1-215	ENST00000453208	RBM33	Q96EV2	1170 aa	Known RBP	28.85	■■■□□ 2.21
GGA1-215	ENST00000453208	DUOX2	Q9NRD8	1548 aa		28.84	■■■□□ 2.21
GGA1-215	ENST00000453208	RRP7BP	Q9NSQ0	103 aa		28.83	■■■□□ 2.21
GGA1-215	ENST00000453208	KIF15	Q9NS87	1388 aa		28.83	■■■□□ 2.21
GGA1-215	ENST00000453208	ABCC5	O15440	1437 aa		28.83	■■■□□ 2.21
GGA1-215	ENST00000453208	ARHGAP31	Q2M1Z3	1444 aa		28.82	■■■□□ 2.2
GGA1-215	ENST00000453208	PRDM15	P57071	1507 aa	Predicted RBP	28.82	■■■□□ 2.2
GGA1-215	ENST00000453208	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.81	■■■□□ 2.2	2e-8	■■□□□ 11.8
GGA1-215	ENST00000453208	PIK3C2B	O00750	1634 aa		28.8	■■■□□ 2.2
GGA1-215	ENST00000453208	TMEM2	Q9UHN6	1383 aa		28.78	■■■□□ 2.2
GGA1-215	ENST00000453208	POTEA	Q6S8J7	498 aa		28.77	■■■□□ 2.2
GGA1-215	ENST00000453208	TMEM94	Q12767	1356 aa		28.76	■■■□□ 2.2
GGA1-215	ENST00000453208	IDI1	Q13907	227 aa		28.75	■■■□□ 2.19
GGA1-215	ENST00000453208	SLC26A8	Q96RN1	970 aa		28.74	■■■□□ 2.19
GGA1-215	ENST00000453208	CROCC2	H7BZ55	1655 aa		28.74	■■■□□ 2.19
GGA1-215	ENST00000453208	DAPK1	P53355	1430 aa		28.73	■■■□□ 2.19
GGA1-215	ENST00000453208	ERBIN	Q96RT1	1412 aa		28.73	■■■□□ 2.19
GGA1-215	ENST00000453208	FAM135B	Q49AJ0	1406 aa		28.72	■■■□□ 2.19
GGA1-215	ENST00000453208	EID1	Q9Y6B2	187 aa		28.7	■■■□□ 2.18
GGA1-215	ENST00000453208	TET3	O43151	1660 aa		28.69	■■■□□ 2.18
GGA1-215	ENST00000453208	CHIC2	Q9UKJ5	165 aa		28.67	■■■□□ 2.18
GGA1-215	ENST00000453208	EFCAB6	Q5THR3	1501 aa		28.66	■■■□□ 2.18
GGA1-215	ENST00000453208	KCNA6	P17658	529 aa		28.66	■■■□□ 2.18
GGA1-215	ENST00000453208	STAG3	Q9UJ98	1225 aa		28.63	■■■□□ 2.17
GGA1-215	ENST00000453208	LMTK2	Q8IWU2	1503 aa		28.63	■■■□□ 2.17
GGA1-215	ENST00000453208	NOS1	P29475	1434 aa		28.62	■■■□□ 2.17
GGA1-215	ENST00000453208	ROBO1	Q9Y6N7	1651 aa		28.62	■■■□□ 2.17
GGA1-215	ENST00000453208	PROSER2	Q86WR7	435 aa	Predicted RBP	28.62	■■■□□ 2.17
GGA1-215	ENST00000453208	FAM50A	Q14320	339 aa	Known RBP	28.61	■■■□□ 2.17
GGA1-215	ENST00000453208	PPARGC1B	Q86YN6	1023 aa	Known RBP	28.6	■■■□□ 2.17
GGA1-215	ENST00000453208	ADGRL2	O95490	1459 aa		28.56	■■■□□ 2.16
GGA1-215	ENST00000453208	ANKRD30A	Q9BXX3	1397 aa		28.56	■■■□□ 2.16
GGA1-215	ENST00000453208	NWD1	Q149M9	1564 aa		28.55	■■■□□ 2.16
GGA1-215	ENST00000453208	ADGRB3	O60242	1522 aa		28.55	■■■□□ 2.16
GGA1-215	ENST00000453208	KANK1	Q14678	1352 aa		28.55	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms