RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 KDM5DQ9BY66 1539 aa28.92■■■□□ 2.22
PDLIM2-214ENST00000452226 FAM135AQ9P2D6 1515 aa28.91■■■□□ 2.22
PDLIM2-214ENST00000452226 MAST1Q9Y2H9 1570 aa28.91■■■□□ 2.22
PDLIM2-214ENST00000452226 NCKAP5LQ9HCH0 1330 aa28.91■■■□□ 2.22
PDLIM2-214ENST00000452226 APLP2Q06481 763 aa28.9■■■□□ 2.22
PDLIM2-214ENST00000452226 WASHC2CQ9Y4E1 1318 aa28.9■■■□□ 2.22
PDLIM2-214ENST00000452226 PLA2R1Q13018 1463 aa28.88■■■□□ 2.21
PDLIM2-214ENST00000452226 FBXO31Q5XUX0 539 aaPredicted RBP28.87■■■□□ 2.21
PDLIM2-214ENST00000452226 A2ML1A8K2U0 1454 aa28.85■■■□□ 2.21
PDLIM2-214ENST00000452226 PZPP20742 1482 aa28.85■■■□□ 2.21
PDLIM2-214ENST00000452226 PKD2Q13563 968 aa28.85■■■□□ 2.21
PDLIM2-214ENST00000452226 LTBP4Q8N2S1 1624 aa28.84■■■□□ 2.21
PDLIM2-214ENST00000452226 TNRQ92752 1358 aa28.84■■■□□ 2.21
PDLIM2-214ENST00000452226 TCOF1Q13428 1488 aaKnown RBP28.82■■■□□ 2.2
PDLIM2-214ENST00000452226 IQSEC2Q5JU85 1478 aa28.82■■■□□ 2.2
PDLIM2-214ENST00000452226 DNMT1P26358 1616 aaKnown RBP28.82■■■□□ 2.2
PDLIM2-214ENST00000452226 RNF17Q9BXT8 1623 aaKnown RBP28.82■■■□□ 2.2
PDLIM2-214ENST00000452226 EIF2AK4Q9P2K8 1649 aaKnown RBP28.79■■■□□ 2.2
PDLIM2-214ENST00000452226 PTPN23Q9H3S7 1636 aa28.77■■■□□ 2.2
PDLIM2-214ENST00000452226 DISP3Q9P2K9 1392 aa28.75■■■□□ 2.19
PDLIM2-214ENST00000452226 ABCC3O15438 1527 aa28.74■■■□□ 2.19
PDLIM2-214ENST00000452226 DUOX2Q9NRD8 1548 aa28.74■■■□□ 2.19
PDLIM2-214ENST00000452226 ZC3H13Q5T200 1668 aaKnown RBP28.74■■■□□ 2.19
PDLIM2-214ENST00000452226 CROCC2H7BZ55 1655 aa28.74■■■□□ 2.19
PDLIM2-214ENST00000452226 ZNF335Q9H4Z2 1342 aaPredicted RBP28.73■■■□□ 2.19
PDLIM2-214ENST00000452226 ABCC5O15440 1437 aa28.73■■■□□ 2.19
PDLIM2-214ENST00000452226 MROH1Q8NDA8 1641 aa28.71■■■□□ 2.19
PDLIM2-214ENST00000452226 NLRP1Q9C000 1473 aa28.71■■■□□ 2.19
PDLIM2-214ENST00000452226 SHANK2Q9UPX8 1470 aa28.71■■■□□ 2.19
PDLIM2-214ENST00000452226 FGD6Q6ZV73 1430 aa28.7■■■□□ 2.19
PDLIM2-214ENST00000452226 POLR1AO95602 1720 aaPredicted RBP28.7■■■□□ 2.19
PDLIM2-214ENST00000452226 KIF15Q9NS87 1388 aa28.7■■■□□ 2.18
PDLIM2-214ENST00000452226 CFAP65Q6ZU64 1925 aaKnown RBP28.69■■■□□ 2.18
PDLIM2-214ENST00000452226 CEP152O94986 1710 aa28.68■■■□□ 2.18
PDLIM2-214ENST00000452226 THEMISQ8N1K5 641 aaPredicted RBP28.67■■■□□ 2.18
PDLIM2-214ENST00000452226 RRP7BPQ9NSQ0 103 aa28.67■■■□□ 2.18
PDLIM2-214ENST00000452226 DAPK1P53355 1430 aa28.67■■■□□ 2.18
PDLIM2-214ENST00000452226 UGGT1Q9NYU2 1555 aa28.66■■■□□ 2.18
PDLIM2-214ENST00000452226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.65■■■□□ 2.18
PDLIM2-214ENST00000452226 SPATA31D1Q6ZQQ2 1576 aa28.64■■■□□ 2.18
PDLIM2-214ENST00000452226 NEURL4Q96JN8 1562 aa28.64■■■□□ 2.18
PDLIM2-214ENST00000452226 ERBINQ96RT1 1412 aa28.63■■■□□ 2.17
PDLIM2-214ENST00000452226 UBAP1LF5GYI3 381 aa28.63■■■□□ 2.17
PDLIM2-214ENST00000452226 ANKLE2Q86XL3 938 aa28.63■■■□□ 2.17
PDLIM2-214ENST00000452226 ERVK-7P63135 1459 aa28.62■■■□□ 2.17
PDLIM2-214ENST00000452226 PRDM15P57071 1507 aaPredicted RBP28.59■■■□□ 2.17
PDLIM2-214ENST00000452226 CHIC2Q9UKJ5 165 aa28.58■■■□□ 2.17
PDLIM2-214ENST00000452226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.56■■■□□ 2.16
PDLIM2-214ENST00000452226 ANKRD30AQ9BXX3 1397 aa28.56■■■□□ 2.16
PDLIM2-214ENST00000452226 DEPDC5O75140 1603 aa28.54■■■□□ 2.16
PDLIM2-214ENST00000452226 MED14O60244 1454 aa28.53■■■□□ 2.16
PDLIM2-214ENST00000452226 NPHP4O75161 1426 aaPredicted RBP28.52■■■□□ 2.16
PDLIM2-214ENST00000452226 ARHGAP31Q2M1Z3 1444 aa28.52■■■□□ 2.16
PDLIM2-214ENST00000452226 ILDR2Q71H61 639 aa28.52■■■□□ 2.16
PDLIM2-214ENST00000452226 KANK1Q14678 1352 aa28.5■■■□□ 2.15
PDLIM2-214ENST00000452226 FAM50AQ14320 339 aaKnown RBP28.5■■■□□ 2.15
PDLIM2-214ENST00000452226 UBR1Q8IWV7 1749 aa28.49■■■□□ 2.15
PDLIM2-214ENST00000452226 SOCS7O14512 581 aa28.49■■■□□ 2.15
PDLIM2-214ENST00000452226 CPS1P31327 1500 aa28.48■■■□□ 2.15
PDLIM2-214ENST00000452226 IQGAP1P46940 1657 aa28.48■■■□□ 2.15
PDLIM2-214ENST00000452226 VWDEQ8N2E2 1590 aa28.46■■■□□ 2.15
PDLIM2-214ENST00000452226 TOM1O60784 492 aa28.45■■■□□ 2.14
PDLIM2-214ENST00000452226 ADGRL2O95490 1459 aa28.45■■■□□ 2.14
PDLIM2-214ENST00000452226 SCAF1Q9H7N4 1312 aaKnown RBP28.43■■■□□ 2.14
PDLIM2-214ENST00000452226 LMTK2Q8IWU2 1503 aa28.42■■■□□ 2.14
PDLIM2-214ENST00000452226 PIK3C2BO00750 1634 aa28.38■■■□□ 2.13
PDLIM2-214ENST00000452226 SCAF11Q99590 1463 aaKnown RBP28.38■■■□□ 2.13
PDLIM2-214ENST00000452226 SLIT1O75093 1534 aa28.37■■■□□ 2.13
PDLIM2-214ENST00000452226 ARHGAP23Q9P227 1491 aa28.36■■■□□ 2.13
PDLIM2-214ENST00000452226 LTKP29376 864 aa28.36■■■□□ 2.13
PDLIM2-214ENST00000452226 PIP4K2BP78356 416 aa28.36■■■□□ 2.13
PDLIM2-214ENST00000452226 TXNDC2Q86VQ3 553 aa28.35■■■□□ 2.13
PDLIM2-214ENST00000452226 ANKRD50Q9ULJ7 1429 aa28.35■■■□□ 2.13
PDLIM2-214ENST00000452226 STRCP1A6NGW2 1772 aa28.34■■■□□ 2.13
PDLIM2-214ENST00000452226 STAG3Q9UJ98 1225 aa28.34■■■□□ 2.13
PDLIM2-214ENST00000452226 EFCAB6Q5THR3 1501 aa28.33■■■□□ 2.13
PDLIM2-214ENST00000452226 EID1Q9Y6B2 187 aa28.32■■■□□ 2.12
PDLIM2-214ENST00000452226 IDI1Q13907 227 aa28.31■■■□□ 2.12
PDLIM2-214ENST00000452226 SYNMO15061 1565 aa28.3■■■□□ 2.12
PDLIM2-214ENST00000452226 KDM5AP29375 1690 aaKnown RBP28.29■■■□□ 2.12
PDLIM2-214ENST00000452226 TMEM2Q9UHN6 1383 aa28.29■■■□□ 2.12
PDLIM2-214ENST00000452226 NOS1P29475 1434 aa28.28■■■□□ 2.12
PDLIM2-214ENST00000452226 HSPA1LP34931 641 aa28.28■■■□□ 2.12
PDLIM2-214ENST00000452226 LRRC7Q96NW7 1537 aa28.26■■■□□ 2.11
PDLIM2-214ENST00000452226 TET3O43151 1660 aa28.23■■■□□ 2.11
PDLIM2-214ENST00000452226 RPRD2Q5VT52 1461 aaKnown RBP28.22■■■□□ 2.11
PDLIM2-214ENST00000452226 PPARGC1BQ86YN6 1023 aaKnown RBP28.22■■■□□ 2.11
PDLIM2-214ENST00000452226 SLC52A1Q9NWF4 448 aa28.22■■■□□ 2.11
PDLIM2-214ENST00000452226 ROCK1Q13464 1354 aa28.21■■■□□ 2.11
PDLIM2-214ENST00000452226 ADGRB3O60242 1522 aa28.2■■■□□ 2.1
PDLIM2-214ENST00000452226 ALKQ9UM73 1620 aa28.2■■■□□ 2.1
PDLIM2-214ENST00000452226 UNC13BO14795 1591 aa28.2■■■□□ 2.1
PDLIM2-214ENST00000452226 GCC2Q8IWJ2 1684 aa28.18■■■□□ 2.1
PDLIM2-214ENST00000452226 ITGAEP38570 1179 aa28.16■■■□□ 2.1
PDLIM2-214ENST00000452226 MYO5BQ9ULV0 1848 aa28.14■■■□□ 2.1
PDLIM2-214ENST00000452226 XIRP1Q702N8 1843 aaKnown RBP28.13■■■□□ 2.09
PDLIM2-214ENST00000452226 SLC26A8Q96RN1 970 aa28.11■■■□□ 2.09
PDLIM2-214ENST00000452226 E9PCH4 1651 aa28.1■■■□□ 2.09
PDLIM2-214ENST00000452226 IQGAP3Q86VI3 1631 aa28.1■■■□□ 2.09
PDLIM2-214ENST00000452226 MED1Q15648 1581 aaPredicted RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms