RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 MYO3AQ8NEV4 1616 aa12.27□□□□□ -0.44
RBM39-218ENST00000449489 SUPT6HQ7KZ85 1726 aaKnown RBP12.27□□□□□ -0.45
RBM39-218ENST00000449489 PTPRKQ15262 1439 aa12.27□□□□□ -0.45
RBM39-218ENST00000449489 ITSN2Q9NZM3 1697 aa12.26□□□□□ -0.45
RBM39-218ENST00000449489 PREX2Q70Z35 1606 aa12.26□□□□□ -0.45
RBM39-218ENST00000449489 SHANK2Q9UPX8 1470 aa12.23□□□□□ -0.45
RBM39-218ENST00000449489 PIP4K2BP78356 416 aa12.23□□□□□ -0.45
RBM39-218ENST00000449489 ATP1B4Q9UN42 357 aaPredicted RBP12.23□□□□□ -0.45
RBM39-218ENST00000449489 SAMD9LQ8IVG5 1584 aa12.22□□□□□ -0.45
RBM39-218ENST00000449489 A2ML1A8K2U0 1454 aa12.22□□□□□ -0.45
RBM39-218ENST00000449489 CLTCQ00610 1675 aaKnown RBP12.22□□□□□ -0.45
RBM39-218ENST00000449489 PLXNC1O60486 1568 aa12.22□□□□□ -0.45
RBM39-218ENST00000449489 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.46
RBM39-218ENST00000449489 SPAG9O60271 1321 aaKnown RBP12.2□□□□□ -0.46
RBM39-218ENST00000449489 ARHGAP35Q9NRY4 1499 aa12.2□□□□□ -0.46
RBM39-218ENST00000449489 POTEHQ6S545 545 aa12.19□□□□□ -0.46
RBM39-218ENST00000449489 POLR1AO95602 1720 aaPredicted RBP12.19□□□□□ -0.46
RBM39-218ENST00000449489 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
RBM39-218ENST00000449489 SRCAPQ6ZRS2 3230 aa12.18□□□□□ -0.46
RBM39-218ENST00000449489 CDC42BPAQ5VT25 1732 aa12.18□□□□□ -0.46
RBM39-218ENST00000449489 LRRIQ1Q96JM4 1722 aa12.18□□□□□ -0.46
RBM39-218ENST00000449489 A2MP01023 1474 aa12.18□□□□□ -0.46
RBM39-218ENST00000449489 KIAA1107Q9UPP5 1409 aa12.18□□□□□ -0.46
RBM39-218ENST00000449489 NEURL4Q96JN8 1562 aa12.18□□□□□ -0.46
RBM39-218ENST00000449489 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
RBM39-218ENST00000449489 MED14O60244 1454 aa12.16□□□□□ -0.46
RBM39-218ENST00000449489 CCDC18Q5T9S5 1454 aa12.16□□□□□ -0.46
RBM39-218ENST00000449489 VWDEQ8N2E2 1590 aa12.16□□□□□ -0.46
RBM39-218ENST00000449489 INO80Q9ULG1 1556 aaPredicted RBP12.15□□□□□ -0.46
RBM39-218ENST00000449489 GGT6Q6P531 493 aa12.15□□□□□ -0.46
RBM39-218ENST00000449489 ANKLE2Q86XL3 938 aa12.15□□□□□ -0.46
RBM39-218ENST00000449489 PLEKHH2Q8IVE3 1493 aa12.14□□□□□ -0.47
RBM39-218ENST00000449489 RGS17Q9UGC6 210 aaPredicted RBP12.14□□□□□ -0.47
RBM39-218ENST00000449489 SYCP2Q9BX26 1530 aa12.14□□□□□ -0.47
RBM39-218ENST00000449489 DEPDC5O75140 1603 aa12.13□□□□□ -0.47
RBM39-218ENST00000449489 THEMISQ8N1K5 641 aaPredicted RBP12.13□□□□□ -0.47
RBM39-218ENST00000449489 CASKIN1Q8WXD9 1431 aa12.12□□□□□ -0.47
RBM39-218ENST00000449489 FAM135AQ9P2D6 1515 aa12.12□□□□□ -0.47
RBM39-218ENST00000449489 GPATCH8Q9UKJ3 1502 aaKnown RBP12.12□□□□□ -0.47
RBM39-218ENST00000449489 HNRNPMP52272 730 aaKnown RBP eCLIP12.12□□□□□ -0.47
RBM39-218ENST00000449489 TNRQ92752 1358 aa12.12□□□□□ -0.47
RBM39-218ENST00000449489 ADGBQ8N7X0 1667 aa12.12□□□□□ -0.47
RBM39-218ENST00000449489 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
RBM39-218ENST00000449489 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
RBM39-218ENST00000449489 NPHP4O75161 1426 aaPredicted RBP12.11□□□□□ -0.47
RBM39-218ENST00000449489 NLRP1Q9C000 1473 aa12.1□□□□□ -0.47
RBM39-218ENST00000449489 POLA2Q14181 598 aa12.1□□□□□ -0.47
RBM39-218ENST00000449489 ZNF777Q9ULD5 760 aaPredicted RBP12.1□□□□□ -0.47
RBM39-218ENST00000449489 PZPP20742 1482 aa12.09□□□□□ -0.47
RBM39-218ENST00000449489 RNF17Q9BXT8 1623 aaKnown RBP12.09□□□□□ -0.47
RBM39-218ENST00000449489 LRRC7Q96NW7 1537 aa12.09□□□□□ -0.47
RBM39-218ENST00000449489 RTEL1-TNFRSF6BF6WH68 1400 aa12.09□□□□□ -0.47
RBM39-218ENST00000449489 SYNMO15061 1565 aa12.09□□□□□ -0.47
RBM39-218ENST00000449489 DHX29Q7Z478 1369 aaKnown RBP12.08□□□□□ -0.48
RBM39-218ENST00000449489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.08□□□□□ -0.48
RBM39-218ENST00000449489 MIA2Q96PC5 1412 aa12.08□□□□□ -0.48
RBM39-218ENST00000449489 FBXO31Q5XUX0 539 aaPredicted RBP12.07□□□□□ -0.48
RBM39-218ENST00000449489 CFDP1Q9UEE9 299 aaPredicted RBP12.07□□□□□ -0.48
RBM39-218ENST00000449489 IQGAP1P46940 1657 aa12.06□□□□□ -0.48
RBM39-218ENST00000449489 UGGT1Q9NYU2 1555 aa12.06□□□□□ -0.48
RBM39-218ENST00000449489 RBM42Q9BTD8 480 aaKnown RBP12.06□□□□□ -0.48
RBM39-218ENST00000449489 STRCP1A6NGW2 1772 aa12.05□□□□□ -0.48
RBM39-218ENST00000449489 KDM5DQ9BY66 1539 aa12.05□□□□□ -0.48
RBM39-218ENST00000449489 FYCO1Q9BQS8 1478 aa12.04□□□□□ -0.48
RBM39-218ENST00000449489 POTEAQ6S8J7 498 aa12.04□□□□□ -0.48
RBM39-218ENST00000449489 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
RBM39-218ENST00000449489 MBD5Q9P267 1494 aa12.03□□□□□ -0.48
RBM39-218ENST00000449489 CCNB3Q8WWL7 1395 aa12.03□□□□□ -0.48
RBM39-218ENST00000449489 WASHC2CQ9Y4E1 1318 aa12.02□□□□□ -0.49
RBM39-218ENST00000449489 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
RBM39-218ENST00000449489 KIF3BO15066 747 aa12□□□□□ -0.49
RBM39-218ENST00000449489 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
RBM39-218ENST00000449489 ZC3H13Q5T200 1668 aaKnown RBP12□□□□□ -0.49
RBM39-218ENST00000449489 RSPH4AQ5TD94 716 aa11.99□□□□□ -0.49
RBM39-218ENST00000449489 MKRN4PQ13434 485 aaPredicted RBP11.98□□□□□ -0.49
RBM39-218ENST00000449489 XIRP1Q702N8 1843 aaKnown RBP11.97□□□□□ -0.49
RBM39-218ENST00000449489 ZNF644Q9H582 1327 aaPredicted RBP11.95□□□□□ -0.5
RBM39-218ENST00000449489 FBXO3Q9UK99 471 aa11.95□□□□□ -0.5
RBM39-218ENST00000449489 SCAF11Q99590 1463 aaKnown RBP11.95□□□□□ -0.5
RBM39-218ENST00000449489 ARHGAP23Q9P227 1491 aa11.94□□□□□ -0.5
RBM39-218ENST00000449489 SLIT1O75093 1534 aa11.93□□□□□ -0.5
RBM39-218ENST00000449489 CCDC141Q6ZP82 1450 aa11.93□□□□□ -0.5
RBM39-218ENST00000449489 MTUS2Q5JR59 1369 aa11.92□□□□□ -0.5
RBM39-218ENST00000449489 TIAM1Q13009 1591 aa11.92□□□□□ -0.5
RBM39-218ENST00000449489 UBR1Q8IWV7 1749 aa11.92□□□□□ -0.5
RBM39-218ENST00000449489 ERVK-7P63135 1459 aa11.91□□□□□ -0.5
RBM39-218ENST00000449489 LRRC9Q6ZRR7 1453 aa11.91□□□□□ -0.5
RBM39-218ENST00000449489 UPF1Q92900 1129 aaKnown RBP eCLIP11.91□□□□□ -0.5
RBM39-218ENST00000449489 LTKP29376 864 aa11.9□□□□□ -0.5
RBM39-218ENST00000449489 CEP162Q5TB80 1403 aa11.9□□□□□ -0.5
RBM39-218ENST00000449489 TXNDC2Q86VQ3 553 aa11.9□□□□□ -0.5
RBM39-218ENST00000449489 ROBO1Q9Y6N7 1651 aa11.9□□□□□ -0.5
RBM39-218ENST00000449489 ABCC3O15438 1527 aa11.9□□□□□ -0.5
RBM39-218ENST00000449489 NCOA2Q15596 1464 aa11.89□□□□□ -0.51
RBM39-218ENST00000449489 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
RBM39-218ENST00000449489 EID1Q9Y6B2 187 aa11.89□□□□□ -0.51
RBM39-218ENST00000449489 TMEM94Q12767 1356 aa11.89□□□□□ -0.51
RBM39-218ENST00000449489 JCADQ9P266 1359 aa11.89□□□□□ -0.51
RBM39-218ENST00000449489 KCNA6P17658 529 aa11.88□□□□□ -0.51
RBM39-218ENST00000449489 CAMSAP2Q08AD1 1489 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms