RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 RTEL1-TNFRSF6BF6WH68 1400 aa22.39■■□□□ 1.17
CDK3-202ENST00000448471 DHX29Q7Z478 1369 aaKnown RBP22.38■■□□□ 1.17
CDK3-202ENST00000448471 PPARGC1BQ86YN6 1023 aaKnown RBP22.36■■□□□ 1.17
CDK3-202ENST00000448471 EHBP1L1Q8N3D4 1523 aa22.36■■□□□ 1.17
CDK3-202ENST00000448471 TNRQ92752 1358 aa22.35■■□□□ 1.17
CDK3-202ENST00000448471 APLP2Q06481 763 aa22.35■■□□□ 1.17
CDK3-202ENST00000448471 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
CDK3-202ENST00000448471 NEURL4Q96JN8 1562 aa22.34■■□□□ 1.17
CDK3-202ENST00000448471 POLR1AO95602 1720 aaPredicted RBP22.34■■□□□ 1.17
CDK3-202ENST00000448471 CPS1P31327 1500 aa22.33■■□□□ 1.17
CDK3-202ENST00000448471 FBXO31Q5XUX0 539 aaPredicted RBP22.33■■□□□ 1.17
CDK3-202ENST00000448471 KDM5DQ9BY66 1539 aa22.32■■□□□ 1.16
CDK3-202ENST00000448471 KIF3BO15066 747 aa22.32■■□□□ 1.16
CDK3-202ENST00000448471 HSPA1LP34931 641 aa22.32■■□□□ 1.16
CDK3-202ENST00000448471 PIP4K2BP78356 416 aa22.32■■□□□ 1.16
CDK3-202ENST00000448471 PZPP20742 1482 aa22.32■■□□□ 1.16
CDK3-202ENST00000448471 SHANK2Q9UPX8 1470 aa22.31■■□□□ 1.16
CDK3-202ENST00000448471 TOM1O60784 492 aa22.3■■□□□ 1.16
CDK3-202ENST00000448471 FAM135AQ9P2D6 1515 aa22.3■■□□□ 1.16
CDK3-202ENST00000448471 CCDC141Q6ZP82 1450 aa22.29■■□□□ 1.16
CDK3-202ENST00000448471 MED1Q15648 1581 aaPredicted RBP22.29■■□□□ 1.16
CDK3-202ENST00000448471 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.27■■□□□ 1.16
CDK3-202ENST00000448471 WASHC2CQ9Y4E1 1318 aa22.27■■□□□ 1.16
CDK3-202ENST00000448471 ANKLE2Q86XL3 938 aa22.26■■□□□ 1.15
CDK3-202ENST00000448471 CAMSAP2Q08AD1 1489 aa22.25■■□□□ 1.15
CDK3-202ENST00000448471 THEMISQ8N1K5 641 aaPredicted RBP22.25■■□□□ 1.15
CDK3-202ENST00000448471 MIA2Q96PC5 1412 aa22.24■■□□□ 1.15
CDK3-202ENST00000448471 VWDEQ8N2E2 1590 aa22.24■■□□□ 1.15
CDK3-202ENST00000448471 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
CDK3-202ENST00000448471 NLRP1Q9C000 1473 aa22.24■■□□□ 1.15
CDK3-202ENST00000448471 UGGT1Q9NYU2 1555 aa22.23■■□□□ 1.15
CDK3-202ENST00000448471 NPHP4O75161 1426 aaPredicted RBP22.22■■□□□ 1.15
CDK3-202ENST00000448471 RSPH4AQ5TD94 716 aa22.22■■□□□ 1.15
CDK3-202ENST00000448471 NCOA2Q15596 1464 aa22.22■■□□□ 1.15
CDK3-202ENST00000448471 MED14O60244 1454 aa22.21■■□□□ 1.15
CDK3-202ENST00000448471 DEPDC5O75140 1603 aa22.2■■□□□ 1.14
CDK3-202ENST00000448471 ALKQ9UM73 1620 aa22.17■■□□□ 1.14
CDK3-202ENST00000448471 ARHGEF5Q12774 1597 aa22.16■■□□□ 1.14
CDK3-202ENST00000448471 TSPY4P0CV99 314 aa22.15■■□□□ 1.14
CDK3-202ENST00000448471 TSPY10P0CW01 314 aa22.15■■□□□ 1.14
CDK3-202ENST00000448471 IQGAP1P46940 1657 aa22.15■■□□□ 1.14
CDK3-202ENST00000448471 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
CDK3-202ENST00000448471 ABCC3O15438 1527 aa22.12■■□□□ 1.13
CDK3-202ENST00000448471 RNF17Q9BXT8 1623 aaKnown RBP22.12■■□□□ 1.13
CDK3-202ENST00000448471 LRRC7Q96NW7 1537 aa22.1■■□□□ 1.13
CDK3-202ENST00000448471 ZC3H13Q5T200 1668 aaKnown RBP22.1■■□□□ 1.13
CDK3-202ENST00000448471 KANK4Q5T7N3 995 aaPredicted RBP22.1■■□□□ 1.13
CDK3-202ENST00000448471 STRCP1A6NGW2 1772 aa22.08■■□□□ 1.13
CDK3-202ENST00000448471 SYNMO15061 1565 aa22.08■■□□□ 1.13
CDK3-202ENST00000448471 ERVK-7P63135 1459 aa22.08■■□□□ 1.13
CDK3-202ENST00000448471 SENP3Q9H4L4 574 aaPredicted RBP22.08■■□□□ 1.13
CDK3-202ENST00000448471 MAST1Q9Y2H9 1570 aa22.07■■□□□ 1.12
CDK3-202ENST00000448471 EIF2AK4Q9P2K8 1649 aaKnown RBP22.05■■□□□ 1.12
CDK3-202ENST00000448471 HRCP23327 699 aa22.05■■□□□ 1.12
CDK3-202ENST00000448471 LRRC9Q6ZRR7 1453 aa22.04■■□□□ 1.12
CDK3-202ENST00000448471 MROH1Q8NDA8 1641 aa22.03■■□□□ 1.12
CDK3-202ENST00000448471 UBR1Q8IWV7 1749 aa22.01■■□□□ 1.11
CDK3-202ENST00000448471 SCAF11Q99590 1463 aaKnown RBP22.01■■□□□ 1.11
CDK3-202ENST00000448471 CEP152O94986 1710 aa22■■□□□ 1.11
CDK3-202ENST00000448471 ARHGAP23Q9P227 1491 aa21.97■■□□□ 1.11
CDK3-202ENST00000448471 LTKP29376 864 aa21.96■■□□□ 1.11
CDK3-202ENST00000448471 SLIT1O75093 1534 aa21.96■■□□□ 1.11
CDK3-202ENST00000448471 DUOX2Q9NRD8 1548 aa21.96■■□□□ 1.11
CDK3-202ENST00000448471 TXNDC2Q86VQ3 553 aa21.95■■□□□ 1.11
CDK3-202ENST00000448471 RRBP1Q9P2E9 1410 aaKnown RBP21.95■■□□□ 1.11
CDK3-202ENST00000448471 ARHGAP31Q2M1Z3 1444 aa21.92■■□□□ 1.1
CDK3-202ENST00000448471 MYOM3Q5VTT5 1437 aa21.92■■□□□ 1.1
CDK3-202ENST00000448471 CFAP65Q6ZU64 1925 aaKnown RBP21.92■■□□□ 1.1
CDK3-202ENST00000448471 PRDM15P57071 1507 aaPredicted RBP21.92■■□□□ 1.1
CDK3-202ENST00000448471 EID1Q9Y6B2 187 aa21.91■■□□□ 1.1
CDK3-202ENST00000448471 RGS17Q9UGC6 210 aaPredicted RBP21.9■■□□□ 1.1
CDK3-202ENST00000448471 XIRP1Q702N8 1843 aaKnown RBP21.89■■□□□ 1.1
CDK3-202ENST00000448471 KIF15Q9NS87 1388 aa21.89■■□□□ 1.09
CDK3-202ENST00000448471 ERBINQ96RT1 1412 aa21.87■■□□□ 1.09
CDK3-202ENST00000448471 PIK3C2BO00750 1634 aa21.87■■□□□ 1.09
CDK3-202ENST00000448471 TMEM2Q9UHN6 1383 aa21.87■■□□□ 1.09
CDK3-202ENST00000448471 FAM135BQ49AJ0 1406 aa21.85■■□□□ 1.09
CDK3-202ENST00000448471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.84■■□□□ 1.094e-6■□□□□ 11.1
CDK3-202ENST00000448471 RRP7BPQ9NSQ0 103 aa21.84■■□□□ 1.09
CDK3-202ENST00000448471 STAG3Q9UJ98 1225 aa21.84■■□□□ 1.09
CDK3-202ENST00000448471 TMEM94Q12767 1356 aa21.83■■□□□ 1.08
CDK3-202ENST00000448471 ABCC5O15440 1437 aa21.82■■□□□ 1.08
CDK3-202ENST00000448471 CROCC2H7BZ55 1655 aa21.82■■□□□ 1.08
CDK3-202ENST00000448471 ZEB1P37275 1124 aaPredicted RBP21.82■■□□□ 1.08
CDK3-202ENST00000448471 EFCAB6Q5THR3 1501 aa21.81■■□□□ 1.08
CDK3-202ENST00000448471 KANK1Q14678 1352 aa21.81■■□□□ 1.08
CDK3-202ENST00000448471 KCNA6P17658 529 aa21.79■■□□□ 1.08
CDK3-202ENST00000448471 KDM5AP29375 1690 aaKnown RBP21.78■■□□□ 1.08
CDK3-202ENST00000448471 IDI1Q13907 227 aa21.78■■□□□ 1.08
CDK3-202ENST00000448471 PTPN23Q9H3S7 1636 aa21.77■■□□□ 1.08
CDK3-202ENST00000448471 POTEAQ6S8J7 498 aa21.77■■□□□ 1.08
CDK3-202ENST00000448471 SLC26A8Q96RN1 970 aa21.77■■□□□ 1.08
CDK3-202ENST00000448471 LMTK2Q8IWU2 1503 aa21.77■■□□□ 1.07
CDK3-202ENST00000448471 DAPK1P53355 1430 aa21.77■■□□□ 1.07
CDK3-202ENST00000448471 ROBO1Q9Y6N7 1651 aa21.76■■□□□ 1.07
CDK3-202ENST00000448471 PROSER2Q86WR7 435 aaPredicted RBP21.76■■□□□ 1.07
CDK3-202ENST00000448471 TET3O43151 1660 aa21.76■■□□□ 1.07
CDK3-202ENST00000448471 RBM33Q96EV2 1170 aaKnown RBP21.75■■□□□ 1.07
CDK3-202ENST00000448471 NKTRP30414 1462 aaKnown RBP21.72■■□□□ 1.07
CDK3-202ENST00000448471 ADGRB3O60242 1522 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms