RNA–Protein interactions for RNA: ENST00000447633.1

PSMD1-207, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 2

Gene PSMD1, Length 696 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-207ENST00000447633 NEURL4Q96JN8 1562 aa11.43□□□□□ -0.58
PSMD1-207ENST00000447633 PLEKHH2Q8IVE3 1493 aa11.43□□□□□ -0.58
PSMD1-207ENST00000447633 RNF17Q9BXT8 1623 aaKnown RBP11.41□□□□□ -0.58
PSMD1-207ENST00000447633 ANKLE2Q86XL3 938 aa11.4□□□□□ -0.58
PSMD1-207ENST00000447633 EHMT2Q96KQ7 1210 aa11.4□□□□□ -0.58
PSMD1-207ENST00000447633 SYNMO15061 1565 aa11.4□□□□□ -0.58
PSMD1-207ENST00000447633 VWDEQ8N2E2 1590 aa11.4□□□□□ -0.58
PSMD1-207ENST00000447633 TNRQ92752 1358 aa11.4□□□□□ -0.59
PSMD1-207ENST00000447633 RNF39Q9H2S5 420 aa11.39□□□□□ -0.59
PSMD1-207ENST00000447633 CASKIN1Q8WXD9 1431 aa11.38□□□□□ -0.59
PSMD1-207ENST00000447633 KIAA1107Q9UPP5 1409 aa11.38□□□□□ -0.59
PSMD1-207ENST00000447633 HNRNPMP52272 730 aaKnown RBP eCLIP11.38□□□□□ -0.59
PSMD1-207ENST00000447633 DEPDC5O75140 1603 aa11.38□□□□□ -0.59
PSMD1-207ENST00000447633 IQGAP1P46940 1657 aa11.37□□□□□ -0.59
PSMD1-207ENST00000447633 NPHP4O75161 1426 aaPredicted RBP11.37□□□□□ -0.59
PSMD1-207ENST00000447633 FAM135AQ9P2D6 1515 aa11.37□□□□□ -0.59
PSMD1-207ENST00000447633 ALKQ9UM73 1620 aa11.37□□□□□ -0.59
PSMD1-207ENST00000447633 KDM5DQ9BY66 1539 aa11.36□□□□□ -0.59
PSMD1-207ENST00000447633 THEMISQ8N1K5 641 aaPredicted RBP11.36□□□□□ -0.59
PSMD1-207ENST00000447633 PZPP20742 1482 aa11.36□□□□□ -0.59
PSMD1-207ENST00000447633 UGGT1Q9NYU2 1555 aa11.36□□□□□ -0.59
PSMD1-207ENST00000447633 GPATCH8Q9UKJ3 1502 aaKnown RBP11.35□□□□□ -0.59
PSMD1-207ENST00000447633 CFDP1Q9UEE9 299 aaPredicted RBP11.35□□□□□ -0.59
PSMD1-207ENST00000447633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.35□□□□□ -0.59
PSMD1-207ENST00000447633 FYCO1Q9BQS8 1478 aa11.35□□□□□ -0.59
PSMD1-207ENST00000447633 NLRP1Q9C000 1473 aa11.35□□□□□ -0.59
PSMD1-207ENST00000447633 MED14O60244 1454 aa11.34□□□□□ -0.59
PSMD1-207ENST00000447633 CCNB3Q8WWL7 1395 aa11.34□□□□□ -0.59
PSMD1-207ENST00000447633 LRRC7Q96NW7 1537 aa11.33□□□□□ -0.6
PSMD1-207ENST00000447633 HOXD11P31277 338 aaPredicted RBP11.32□□□□□ -0.6
PSMD1-207ENST00000447633 FBXO31Q5XUX0 539 aaPredicted RBP11.31□□□□□ -0.6
PSMD1-207ENST00000447633 STRCP1A6NGW2 1772 aa11.31□□□□□ -0.6
PSMD1-207ENST00000447633 RTEL1-TNFRSF6BF6WH68 1400 aa11.3□□□□□ -0.6
PSMD1-207ENST00000447633 MIA2Q96PC5 1412 aa11.3□□□□□ -0.6
PSMD1-207ENST00000447633 WASHC2CQ9Y4E1 1318 aa11.3□□□□□ -0.6
PSMD1-207ENST00000447633 DHX29Q7Z478 1369 aaKnown RBP11.29□□□□□ -0.6
PSMD1-207ENST00000447633 KIF3BO15066 747 aa11.29□□□□□ -0.6
PSMD1-207ENST00000447633 RGS17Q9UGC6 210 aaPredicted RBP11.29□□□□□ -0.6
PSMD1-207ENST00000447633 MTUS2Q5JR59 1369 aa11.28□□□□□ -0.6
PSMD1-207ENST00000447633 C1QBPQ07021 282 aaKnown RBP11.27□□□□□ -0.61
PSMD1-207ENST00000447633 SETD1AO15047 1707 aaKnown RBP11.26□□□□□ -0.61
PSMD1-207ENST00000447633 ZC3H13Q5T200 1668 aaKnown RBP11.26□□□□□ -0.61
PSMD1-207ENST00000447633 CCDC141Q6ZP82 1450 aa11.25□□□□□ -0.61
PSMD1-207ENST00000447633 SCAF11Q99590 1463 aaKnown RBP11.25□□□□□ -0.61
PSMD1-207ENST00000447633 TIAM1Q13009 1591 aa11.24□□□□□ -0.61
PSMD1-207ENST00000447633 POTEAQ6S8J7 498 aa11.24□□□□□ -0.61
PSMD1-207ENST00000447633 MBD5Q9P267 1494 aa11.24□□□□□ -0.61
PSMD1-207ENST00000447633 FAM135BQ49AJ0 1406 aa11.23□□□□□ -0.61
PSMD1-207ENST00000447633 EHBP1L1Q8N3D4 1523 aa11.23□□□□□ -0.61
PSMD1-207ENST00000447633 XIRP1Q702N8 1843 aaKnown RBP11.22□□□□□ -0.61
PSMD1-207ENST00000447633 UBR1Q8IWV7 1749 aa11.21□□□□□ -0.61
PSMD1-207ENST00000447633 ROBO1Q9Y6N7 1651 aa11.21□□□□□ -0.61
PSMD1-207ENST00000447633 ERVK-7P63135 1459 aa11.21□□□□□ -0.61
PSMD1-207ENST00000447633 LRRC9Q6ZRR7 1453 aa11.21□□□□□ -0.61
PSMD1-207ENST00000447633 ZNF644Q9H582 1327 aaPredicted RBP11.21□□□□□ -0.61
PSMD1-207ENST00000447633 ABCC3O15438 1527 aa11.2□□□□□ -0.62
PSMD1-207ENST00000447633 RSPH4AQ5TD94 716 aa11.19□□□□□ -0.62
PSMD1-207ENST00000447633 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
PSMD1-207ENST00000447633 EID1Q9Y6B2 187 aa11.19□□□□□ -0.62
PSMD1-207ENST00000447633 CAMSAP2Q08AD1 1489 aa11.19□□□□□ -0.62
PSMD1-207ENST00000447633 EIF2AK4Q9P2K8 1649 aaKnown RBP11.17□□□□□ -0.62
PSMD1-207ENST00000447633 TXNDC2Q86VQ3 553 aa11.17□□□□□ -0.62
PSMD1-207ENST00000447633 SLIT1O75093 1534 aa11.17□□□□□ -0.62
PSMD1-207ENST00000447633 PHLPP1O60346 1717 aa11.17□□□□□ -0.62
PSMD1-207ENST00000447633 CEP162Q5TB80 1403 aa11.17□□□□□ -0.62
PSMD1-207ENST00000447633 CEP152O94986 1710 aa11.16□□□□□ -0.62
PSMD1-207ENST00000447633 TSPY4P0CV99 314 aa11.16□□□□□ -0.62
PSMD1-207ENST00000447633 TSPY10P0CW01 314 aa11.16□□□□□ -0.62
PSMD1-207ENST00000447633 ARHGAP23Q9P227 1491 aa11.16□□□□□ -0.62
PSMD1-207ENST00000447633 ARHGEF5Q12774 1597 aa11.16□□□□□ -0.62
PSMD1-207ENST00000447633 TMEM94Q12767 1356 aa11.16□□□□□ -0.62
PSMD1-207ENST00000447633 JCADQ9P266 1359 aa11.16□□□□□ -0.62
PSMD1-207ENST00000447633 RNF216Q9NWF9 866 aaPredicted RBP11.15□□□□□ -0.62
PSMD1-207ENST00000447633 CFAP65Q6ZU64 1925 aaKnown RBP11.15□□□□□ -0.62
PSMD1-207ENST00000447633 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
PSMD1-207ENST00000447633 MEX3CQ5U5Q3 659 aaKnown RBP11.14□□□□□ -0.63
PSMD1-207ENST00000447633 CNKSR2Q8WXI2 1034 aa11.14□□□□□ -0.63
PSMD1-207ENST00000447633 LTKP29376 864 aa11.13□□□□□ -0.63
PSMD1-207ENST00000447633 ZNF772Q68DY9 489 aaPredicted RBP11.13□□□□□ -0.63
PSMD1-207ENST00000447633 UPF1Q92900 1129 aaKnown RBP eCLIP11.13□□□□□ -0.63
PSMD1-207ENST00000447633 STAG3Q9UJ98 1225 aa11.13□□□□□ -0.63
PSMD1-207ENST00000447633 MAP3K1Q13233 1512 aa11.13□□□□□ -0.63
PSMD1-207ENST00000447633 MSH6P52701 1360 aa11.13□□□□□ -0.63
PSMD1-207ENST00000447633 NKTRP30414 1462 aaKnown RBP11.12□□□□□ -0.63
PSMD1-207ENST00000447633 PROSER2Q86WR7 435 aaPredicted RBP11.12□□□□□ -0.63
PSMD1-207ENST00000447633 TRIM52Q96A61 297 aa11.12□□□□□ -0.63
PSMD1-207ENST00000447633 PRDM15P57071 1507 aaPredicted RBP11.11□□□□□ -0.63
PSMD1-207ENST00000447633 PIK3C2BO00750 1634 aa11.11□□□□□ -0.63
PSMD1-207ENST00000447633 MAST1Q9Y2H9 1570 aa11.11□□□□□ -0.63
PSMD1-207ENST00000447633 MROH1Q8NDA8 1641 aa11.1□□□□□ -0.63
PSMD1-207ENST00000447633 KCNA6P17658 529 aa11.1□□□□□ -0.63
PSMD1-207ENST00000447633 TMEM2Q9UHN6 1383 aa11.1□□□□□ -0.63
PSMD1-207ENST00000447633 SPATA31A6Q5VVP1 1343 aa11.09□□□□□ -0.63
PSMD1-207ENST00000447633 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
PSMD1-207ENST00000447633 KDM5AP29375 1690 aaKnown RBP11.09□□□□□ -0.63
PSMD1-207ENST00000447633 NWD1Q149M9 1564 aa11.09□□□□□ -0.63
PSMD1-207ENST00000447633 COL16A1Q07092 1604 aaPredicted RBP11.09□□□□□ -0.63
PSMD1-207ENST00000447633 FGD6Q6ZV73 1430 aa11.09□□□□□ -0.63
PSMD1-207ENST00000447633 ARHGAP31Q2M1Z3 1444 aa11.08□□□□□ -0.64
PSMD1-207ENST00000447633 RXRBP28702 533 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms