RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 KDM5DQ9BY66 1539 aa33.07■■■□□ 2.88
VSX1-206ENST00000444511 WASHC2CQ9Y4E1 1318 aa33.06■■■□□ 2.88
VSX1-206ENST00000444511 ZNF142P52746 1687 aaPredicted RBP33.06■■■□□ 2.88
VSX1-206ENST00000444511 FAM135AQ9P2D6 1515 aa33.06■■■□□ 2.88
VSX1-206ENST00000444511 MAST1Q9Y2H9 1570 aa33.04■■■□□ 2.88
VSX1-206ENST00000444511 NCKAP5LQ9HCH0 1330 aa33.02■■■□□ 2.88
VSX1-206ENST00000444511 PLA2R1Q13018 1463 aa33■■■□□ 2.87
VSX1-206ENST00000444511 PKD2Q13563 968 aa32.99■■■□□ 2.87
VSX1-206ENST00000444511 FBXO31Q5XUX0 539 aaPredicted RBP32.99■■■□□ 2.87
VSX1-206ENST00000444511 PZPP20742 1482 aa32.99■■■□□ 2.87
VSX1-206ENST00000444511 TNRQ92752 1358 aa32.98■■■□□ 2.87
VSX1-206ENST00000444511 A2ML1A8K2U0 1454 aa32.98■■■□□ 2.87
VSX1-206ENST00000444511 TCOF1Q13428 1488 aaKnown RBP32.93■■■□□ 2.86
VSX1-206ENST00000444511 LTBP4Q8N2S1 1624 aa32.92■■■□□ 2.86
VSX1-206ENST00000444511 RNF17Q9BXT8 1623 aaKnown RBP32.91■■■□□ 2.86
VSX1-206ENST00000444511 DNMT1P26358 1616 aaKnown RBP32.9■■■□□ 2.86
VSX1-206ENST00000444511 EIF2AK4Q9P2K8 1649 aaKnown RBP32.89■■■□□ 2.86
VSX1-206ENST00000444511 PTPN23Q9H3S7 1636 aa32.88■■■□□ 2.85
VSX1-206ENST00000444511 DUOX2Q9NRD8 1548 aa32.87■■■□□ 2.85
VSX1-206ENST00000444511 ABCC3O15438 1527 aa32.86■■■□□ 2.85
VSX1-206ENST00000444511 ABCC5O15440 1437 aa32.85■■■□□ 2.85
VSX1-206ENST00000444511 SHANK2Q9UPX8 1470 aa32.85■■■□□ 2.85
VSX1-206ENST00000444511 ZNF335Q9H4Z2 1342 aaPredicted RBP32.84■■■□□ 2.85
VSX1-206ENST00000444511 FGD6Q6ZV73 1430 aa32.84■■■□□ 2.85
VSX1-206ENST00000444511 KIF15Q9NS87 1388 aa32.83■■■□□ 2.85
VSX1-206ENST00000444511 ZC3H13Q5T200 1668 aaKnown RBP32.83■■■□□ 2.85
VSX1-206ENST00000444511 IQSEC2Q5JU85 1478 aa32.82■■■□□ 2.84
VSX1-206ENST00000444511 NLRP1Q9C000 1473 aa32.82■■■□□ 2.84
VSX1-206ENST00000444511 RRP7BPQ9NSQ0 103 aa32.8■■■□□ 2.84
VSX1-206ENST00000444511 CROCC2H7BZ55 1655 aa32.79■■■□□ 2.84
VSX1-206ENST00000444511 DAPK1P53355 1430 aa32.79■■■□□ 2.84
VSX1-206ENST00000444511 MROH1Q8NDA8 1641 aa32.79■■■□□ 2.84
VSX1-206ENST00000444511 THEMISQ8N1K5 641 aaPredicted RBP32.78■■■□□ 2.84
VSX1-206ENST00000444511 ERBINQ96RT1 1412 aa32.76■■■□□ 2.83
VSX1-206ENST00000444511 UGGT1Q9NYU2 1555 aa32.75■■■□□ 2.83
VSX1-206ENST00000444511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.75■■■□□ 2.83
VSX1-206ENST00000444511 ANKLE2Q86XL3 938 aa32.73■■■□□ 2.83
VSX1-206ENST00000444511 SPATA31D1Q6ZQQ2 1576 aa32.73■■■□□ 2.83
VSX1-206ENST00000444511 ERVK-7P63135 1459 aa32.72■■■□□ 2.83
VSX1-206ENST00000444511 POLR1AO95602 1720 aaPredicted RBP32.71■■■□□ 2.83
VSX1-206ENST00000444511 CHIC2Q9UKJ5 165 aa32.7■■■□□ 2.83
VSX1-206ENST00000444511 CEP152O94986 1710 aa32.7■■■□□ 2.83
VSX1-206ENST00000444511 NEURL4Q96JN8 1562 aa32.7■■■□□ 2.82
VSX1-206ENST00000444511 PRDM15P57071 1507 aaPredicted RBP32.69■■■□□ 2.82
VSX1-206ENST00000444511 ANKRD30AQ9BXX3 1397 aa32.69■■■□□ 2.82
VSX1-206ENST00000444511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.67■■■□□ 2.82
VSX1-206ENST00000444511 KANK1Q14678 1352 aa32.63■■■□□ 2.81
VSX1-206ENST00000444511 ARHGAP31Q2M1Z3 1444 aa32.62■■■□□ 2.81
VSX1-206ENST00000444511 UBAP1LF5GYI3 381 aa32.62■■■□□ 2.81
VSX1-206ENST00000444511 FAM50AQ14320 339 aaKnown RBP32.62■■■□□ 2.81
VSX1-206ENST00000444511 NPHP4O75161 1426 aaPredicted RBP32.61■■■□□ 2.81
VSX1-206ENST00000444511 DEPDC5O75140 1603 aa32.59■■■□□ 2.81
VSX1-206ENST00000444511 MED14O60244 1454 aa32.59■■■□□ 2.81
VSX1-206ENST00000444511 CPS1P31327 1500 aa32.56■■■□□ 2.8
VSX1-206ENST00000444511 ADGRL2O95490 1459 aa32.54■■■□□ 2.8
VSX1-206ENST00000444511 CFAP65Q6ZU64 1925 aaKnown RBP32.53■■■□□ 2.8
VSX1-206ENST00000444511 UBR1Q8IWV7 1749 aa32.51■■■□□ 2.79
VSX1-206ENST00000444511 IQGAP1P46940 1657 aa32.5■■■□□ 2.79
VSX1-206ENST00000444511 VWDEQ8N2E2 1590 aa32.49■■■□□ 2.79
VSX1-206ENST00000444511 LMTK2Q8IWU2 1503 aa32.49■■■□□ 2.79
VSX1-206ENST00000444511 DISP3Q9P2K9 1392 aa32.45■■■□□ 2.79
VSX1-206ENST00000444511 SCAF11Q99590 1463 aaKnown RBP32.45■■■□□ 2.79
VSX1-206ENST00000444511 ANKRD50Q9ULJ7 1429 aa32.43■■■□□ 2.78
VSX1-206ENST00000444511 STAG3Q9UJ98 1225 aa32.43■■■□□ 2.78
VSX1-206ENST00000444511 TXNDC2Q86VQ3 553 aa32.42■■■□□ 2.78
VSX1-206ENST00000444511 ARHGAP23Q9P227 1491 aa32.42■■■□□ 2.78
VSX1-206ENST00000444511 SLIT1O75093 1534 aa32.41■■■□□ 2.78
VSX1-206ENST00000444511 TOM1O60784 492 aa32.4■■■□□ 2.78
VSX1-206ENST00000444511 LTKP29376 864 aa32.4■■■□□ 2.78
VSX1-206ENST00000444511 EID1Q9Y6B2 187 aa32.4■■■□□ 2.78
VSX1-206ENST00000444511 PIK3C2BO00750 1634 aa32.4■■■□□ 2.78
VSX1-206ENST00000444511 SCAF1Q9H7N4 1312 aaKnown RBP32.39■■■□□ 2.78
VSX1-206ENST00000444511 EFCAB6Q5THR3 1501 aa32.39■■■□□ 2.78
VSX1-206ENST00000444511 IDI1Q13907 227 aa32.37■■■□□ 2.77
VSX1-206ENST00000444511 PIP4K2BP78356 416 aa32.36■■■□□ 2.77
VSX1-206ENST00000444511 TMEM2Q9UHN6 1383 aa32.35■■■□□ 2.77
VSX1-206ENST00000444511 NOS1P29475 1434 aa32.34■■■□□ 2.77
VSX1-206ENST00000444511 SYNMO15061 1565 aa32.33■■■□□ 2.77
VSX1-206ENST00000444511 KDM5AP29375 1690 aaKnown RBP32.29■■■□□ 2.76
VSX1-206ENST00000444511 LRRC7Q96NW7 1537 aa32.29■■■□□ 2.76
VSX1-206ENST00000444511 RPRD2Q5VT52 1461 aaKnown RBP32.29■■■□□ 2.76
VSX1-206ENST00000444511 STRCP1A6NGW2 1772 aa32.28■■■□□ 2.76
VSX1-206ENST00000444511 PPARGC1BQ86YN6 1023 aaKnown RBP32.28■■■□□ 2.76
VSX1-206ENST00000444511 SLC52A1Q9NWF4 448 aa32.28■■■□□ 2.76
VSX1-206ENST00000444511 ROCK1Q13464 1354 aa32.28■■■□□ 2.76
VSX1-206ENST00000444511 HSPA1LP34931 641 aa32.24■■■□□ 2.75
VSX1-206ENST00000444511 ITGAEP38570 1179 aa32.24■■■□□ 2.75
VSX1-206ENST00000444511 ADGRB3O60242 1522 aa32.24■■■□□ 2.75
VSX1-206ENST00000444511 TET3O43151 1660 aa32.23■■■□□ 2.75
VSX1-206ENST00000444511 UNC13BO14795 1591 aa32.22■■■□□ 2.75
VSX1-206ENST00000444511 ILDR2Q71H61 639 aa32.2■■■□□ 2.75
VSX1-206ENST00000444511 ALKQ9UM73 1620 aa32.18■■■□□ 2.74
VSX1-206ENST00000444511 GCC2Q8IWJ2 1684 aa32.15■■■□□ 2.74
VSX1-206ENST00000444511 SLC26A8Q96RN1 970 aa32.14■■■□□ 2.74
VSX1-206ENST00000444511 BCANQ96GW7 911 aa32.12■■■□□ 2.73
VSX1-206ENST00000444511 NUP155O75694 1391 aa32.1■■■□□ 2.73
VSX1-206ENST00000444511 IQGAP3Q86VI3 1631 aa32.09■■■□□ 2.73
VSX1-206ENST00000444511 KCNA6P17658 529 aa32.09■■■□□ 2.73
VSX1-206ENST00000444511 HDGFP51858 240 aaKnown RBP32.08■■■□□ 2.73
VSX1-206ENST00000444511 PPP1R15AO75807 674 aaPredicted RBP32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms