RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 KANK4Q5T7N3 995 aaPredicted RBP25.71■■□□□ 1.71
CTDSP1-204ENST00000443891 MYO3AQ8NEV4 1616 aa25.7■■□□□ 1.71
CTDSP1-204ENST00000443891 KDM5DQ9BY66 1539 aa25.7■■□□□ 1.7
CTDSP1-204ENST00000443891 MAST1Q9Y2H9 1570 aa25.69■■□□□ 1.7
CTDSP1-204ENST00000443891 CEP170BQ9Y4F5 1589 aaPredicted RBP25.69■■□□□ 1.7
CTDSP1-204ENST00000443891 WASHC2CQ9Y4E1 1318 aa25.68■■□□□ 1.7
CTDSP1-204ENST00000443891 APLP2Q06481 763 aa25.68■■□□□ 1.7
CTDSP1-204ENST00000443891 IQSEC2Q5JU85 1478 aa25.67■■□□□ 1.7
CTDSP1-204ENST00000443891 A2ML1A8K2U0 1454 aa25.66■■□□□ 1.7
CTDSP1-204ENST00000443891 PZPP20742 1482 aa25.66■■□□□ 1.7
CTDSP1-204ENST00000443891 TCOF1Q13428 1488 aaKnown RBP25.66■■□□□ 1.7
CTDSP1-204ENST00000443891 TNRQ92752 1358 aa25.63■■□□□ 1.69
CTDSP1-204ENST00000443891 LTBP4Q8N2S1 1624 aa25.63■■□□□ 1.69
CTDSP1-204ENST00000443891 NCKAP5LQ9HCH0 1330 aa25.62■■□□□ 1.69
CTDSP1-204ENST00000443891 EIF2AK4Q9P2K8 1649 aaKnown RBP25.59■■□□□ 1.69
CTDSP1-204ENST00000443891 RNF17Q9BXT8 1623 aaKnown RBP25.58■■□□□ 1.69
CTDSP1-204ENST00000443891 DNMT1P26358 1616 aaKnown RBP25.57■■□□□ 1.68
CTDSP1-204ENST00000443891 FBXO31Q5XUX0 539 aaPredicted RBP25.57■■□□□ 1.68
CTDSP1-204ENST00000443891 NLRP1Q9C000 1473 aa25.57■■□□□ 1.68
CTDSP1-204ENST00000443891 SHANK2Q9UPX8 1470 aa25.55■■□□□ 1.68
CTDSP1-204ENST00000443891 DUOX2Q9NRD8 1548 aa25.55■■□□□ 1.68
CTDSP1-204ENST00000443891 THEMISQ8N1K5 641 aaPredicted RBP25.54■■□□□ 1.68
CTDSP1-204ENST00000443891 ZC3H13Q5T200 1668 aaKnown RBP25.54■■□□□ 1.68
CTDSP1-204ENST00000443891 ABCC3O15438 1527 aa25.51■■□□□ 1.67
CTDSP1-204ENST00000443891 ABCC5O15440 1437 aa25.49■■□□□ 1.67
CTDSP1-204ENST00000443891 ZNF335Q9H4Z2 1342 aaPredicted RBP25.49■■□□□ 1.67
CTDSP1-204ENST00000443891 PTPN23Q9H3S7 1636 aa25.48■■□□□ 1.67
CTDSP1-204ENST00000443891 FGD6Q6ZV73 1430 aa25.48■■□□□ 1.67
CTDSP1-204ENST00000443891 ERBINQ96RT1 1412 aa25.48■■□□□ 1.67
CTDSP1-204ENST00000443891 KIF15Q9NS87 1388 aa25.48■■□□□ 1.67
CTDSP1-204ENST00000443891 ANKLE2Q86XL3 938 aa25.48■■□□□ 1.67
CTDSP1-204ENST00000443891 SPATA31D1Q6ZQQ2 1576 aa25.47■■□□□ 1.67
CTDSP1-204ENST00000443891 UGGT1Q9NYU2 1555 aa25.46■■□□□ 1.67
CTDSP1-204ENST00000443891 DAPK1P53355 1430 aa25.45■■□□□ 1.66
CTDSP1-204ENST00000443891 MROH1Q8NDA8 1641 aa25.44■■□□□ 1.66
CTDSP1-204ENST00000443891 ARHGAP31Q2M1Z3 1444 aa25.43■■□□□ 1.66
CTDSP1-204ENST00000443891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.43■■□□□ 1.668e-9■■■■■ 55.4
CTDSP1-204ENST00000443891 ERVK-7P63135 1459 aa25.42■■□□□ 1.66
CTDSP1-204ENST00000443891 CROCC2H7BZ55 1655 aa25.42■■□□□ 1.66
CTDSP1-204ENST00000443891 MED14O60244 1454 aa25.41■■□□□ 1.66
CTDSP1-204ENST00000443891 ANKRD30AQ9BXX3 1397 aa25.41■■□□□ 1.66
CTDSP1-204ENST00000443891 POLR1AO95602 1720 aaPredicted RBP25.4■■□□□ 1.66
CTDSP1-204ENST00000443891 RRP7BPQ9NSQ0 103 aa25.4■■□□□ 1.66
CTDSP1-204ENST00000443891 PRDM15P57071 1507 aaPredicted RBP25.4■■□□□ 1.66
CTDSP1-204ENST00000443891 NEURL4Q96JN8 1562 aa25.39■■□□□ 1.66
CTDSP1-204ENST00000443891 DEPDC5O75140 1603 aa25.39■■□□□ 1.66
CTDSP1-204ENST00000443891 CPS1P31327 1500 aa25.37■■□□□ 1.65
CTDSP1-204ENST00000443891 KANK1Q14678 1352 aa25.37■■□□□ 1.65
CTDSP1-204ENST00000443891 NPHP4O75161 1426 aaPredicted RBP25.36■■□□□ 1.65
CTDSP1-204ENST00000443891 UBAP1LF5GYI3 381 aa25.34■■□□□ 1.65
CTDSP1-204ENST00000443891 CEP152O94986 1710 aa25.32■■□□□ 1.64
CTDSP1-204ENST00000443891 ADGRL2O95490 1459 aa25.3■■□□□ 1.64
CTDSP1-204ENST00000443891 LMTK2Q8IWU2 1503 aa25.3■■□□□ 1.64
CTDSP1-204ENST00000443891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.28■■□□□ 1.644e-17■□□□□ 10.2
CTDSP1-204ENST00000443891 CHIC2Q9UKJ5 165 aa25.28■■□□□ 1.64
CTDSP1-204ENST00000443891 TOM1O60784 492 aa25.26■■□□□ 1.63
CTDSP1-204ENST00000443891 VWDEQ8N2E2 1590 aa25.26■■□□□ 1.63
CTDSP1-204ENST00000443891 IQGAP1P46940 1657 aa25.25■■□□□ 1.63
CTDSP1-204ENST00000443891 UBR1Q8IWV7 1749 aa25.24■■□□□ 1.63
CTDSP1-204ENST00000443891 SLIT1O75093 1534 aa25.24■■□□□ 1.63
CTDSP1-204ENST00000443891 ARHGAP23Q9P227 1491 aa25.24■■□□□ 1.63
CTDSP1-204ENST00000443891 DISP3Q9P2K9 1392 aa25.23■■□□□ 1.63
CTDSP1-204ENST00000443891 FAM50AQ14320 339 aaKnown RBP25.23■■□□□ 1.63
CTDSP1-204ENST00000443891 SCAF11Q99590 1463 aaKnown RBP25.22■■□□□ 1.63
CTDSP1-204ENST00000443891 EID1Q9Y6B2 187 aa25.21■■□□□ 1.63
CTDSP1-204ENST00000443891 TXNDC2Q86VQ3 553 aa25.19■■□□□ 1.62
CTDSP1-204ENST00000443891 ANKRD50Q9ULJ7 1429 aa25.19■■□□□ 1.62
CTDSP1-204ENST00000443891 KDM5AP29375 1690 aaKnown RBP25.18■■□□□ 1.62
CTDSP1-204ENST00000443891 STAG3Q9UJ98 1225 aa25.17■■□□□ 1.62
CTDSP1-204ENST00000443891 TMEM2Q9UHN6 1383 aa25.17■■□□□ 1.62
CTDSP1-204ENST00000443891 CFAP65Q6ZU64 1925 aaKnown RBP25.16■■□□□ 1.62
CTDSP1-204ENST00000443891 LTKP29376 864 aa25.16■■□□□ 1.62
CTDSP1-204ENST00000443891 NOS1P29475 1434 aa25.16■■□□□ 1.62
CTDSP1-204ENST00000443891 SLC52A1Q9NWF4 448 aa25.16■■□□□ 1.62
CTDSP1-204ENST00000443891 RPRD2Q5VT52 1461 aaKnown RBP25.15■■□□□ 1.62
CTDSP1-204ENST00000443891 EFCAB6Q5THR3 1501 aa25.15■■□□□ 1.62
CTDSP1-204ENST00000443891 IDI1Q13907 227 aa25.14■■□□□ 1.62
CTDSP1-204ENST00000443891 PIK3C2BO00750 1634 aa25.12■■□□□ 1.61
CTDSP1-204ENST00000443891 ROCK1Q13464 1354 aa25.12■■□□□ 1.61
CTDSP1-204ENST00000443891 SYNMO15061 1565 aa25.12■■□□□ 1.61
CTDSP1-204ENST00000443891 LRRC7Q96NW7 1537 aa25.11■■□□□ 1.61
CTDSP1-204ENST00000443891 PIP4K2BP78356 416 aa25.08■■□□□ 1.61
CTDSP1-204ENST00000443891 SCAF1Q9H7N4 1312 aaKnown RBP25.08■■□□□ 1.6
CTDSP1-204ENST00000443891 ADGRB3O60242 1522 aa25.04■■□□□ 1.6
CTDSP1-204ENST00000443891 HSPA1LP34931 641 aa25.04■■□□□ 1.6
CTDSP1-204ENST00000443891 STRCP1A6NGW2 1772 aa25.03■■□□□ 1.6
CTDSP1-204ENST00000443891 HDGFP51858 240 aaKnown RBP25.03■■□□□ 1.6
CTDSP1-204ENST00000443891 TET3O43151 1660 aa25.03■■□□□ 1.6
CTDSP1-204ENST00000443891 ILDR2Q71H61 639 aa25.02■■□□□ 1.6
CTDSP1-204ENST00000443891 UNC13BO14795 1591 aa25.01■■□□□ 1.59
CTDSP1-204ENST00000443891 ALKQ9UM73 1620 aa25■■□□□ 1.59
CTDSP1-204ENST00000443891 KCNA6P17658 529 aa24.99■■□□□ 1.59
CTDSP1-204ENST00000443891 SOCS7O14512 581 aa24.98■■□□□ 1.59
CTDSP1-204ENST00000443891 GCC2Q8IWJ2 1684 aa24.97■■□□□ 1.59
CTDSP1-204ENST00000443891 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.93■■□□□ 1.58
CTDSP1-204ENST00000443891 ZFYVE9O95405 1425 aa24.93■■□□□ 1.58
CTDSP1-204ENST00000443891 IQGAP3Q86VI3 1631 aa24.92■■□□□ 1.58
CTDSP1-204ENST00000443891 PLEKHG1Q9ULL1 1385 aa24.92■■□□□ 1.58
CTDSP1-204ENST00000443891 SLC26A8Q96RN1 970 aa24.91■■□□□ 1.58
CTDSP1-204ENST00000443891 NUP155O75694 1391 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms