RNA–Protein interactions for RNA: ENST00000443002.5

POLR2F-206, Transcript of RNA polymerase II subunit F, humanhuman

TSL 2

Gene POLR2F, Length 1,890 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-206ENST00000443002 ATP10AO60312 1499 aa30.47■■■□□ 2.47
POLR2F-206ENST00000443002 CCDC144AA2RUR9 1427 aa30.47■■■□□ 2.47
POLR2F-206ENST00000443002 ZNF326Q5BKZ1 582 aaKnown RBP30.46■■■□□ 2.47
POLR2F-206ENST00000443002 CARD11Q9BXL7 1154 aa30.46■■■□□ 2.47
POLR2F-206ENST00000443002 MRS2Q9HD23 443 aa30.44■■■□□ 2.46
POLR2F-206ENST00000443002 ABCC1P33527 1531 aa30.43■■■□□ 2.46
POLR2F-206ENST00000443002 DCAF11Q8TEB1 546 aa30.42■■■□□ 2.46
POLR2F-206ENST00000443002 CCDC184Q52MB2 194 aa30.4■■■□□ 2.46
POLR2F-206ENST00000443002 PLA2R1Q13018 1463 aa30.4■■■□□ 2.46
POLR2F-206ENST00000443002 RTEL1-TNFRSF6BF6WH68 1400 aa30.38■■■□□ 2.45
POLR2F-206ENST00000443002 PRAG1Q86YV5 1406 aa30.38■■■□□ 2.45
POLR2F-206ENST00000443002 ZBED9Q6R2W3 1325 aa30.37■■■□□ 2.45
POLR2F-206ENST00000443002 LAMC1P11047 1609 aa30.37■■■□□ 2.45
POLR2F-206ENST00000443002 ERICH6BQ5W0A0 696 aa30.37■■■□□ 2.45
POLR2F-206ENST00000443002 TRPM1Q7Z4N2 1603 aa30.36■■■□□ 2.45
POLR2F-206ENST00000443002 KTN1Q86UP2 1357 aaKnown RBP30.36■■■□□ 2.45
POLR2F-206ENST00000443002 GPRASP1Q5JY77 1395 aa30.35■■■□□ 2.45
POLR2F-206ENST00000443002 KDM2AQ9Y2K7 1162 aa30.33■■■□□ 2.45
POLR2F-206ENST00000443002 EIF2AK4Q9P2K8 1649 aaKnown RBP30.31■■■□□ 2.44
POLR2F-206ENST00000443002 TSHZ2Q9NRE2 1034 aa30.3■■■□□ 2.44
POLR2F-206ENST00000443002 ST20-MTHFSA0A0A6YYL1 179 aa30.29■■■□□ 2.44
POLR2F-206ENST00000443002 FAM9BQ8IZU0 186 aa30.29■■■□□ 2.44
POLR2F-206ENST00000443002 A2MP01023 1474 aa30.28■■■□□ 2.44
POLR2F-206ENST00000443002 TRAPPC8Q9Y2L5 1435 aa30.27■■■□□ 2.44
POLR2F-206ENST00000443002 BCANQ96GW7 911 aa30.27■■■□□ 2.44
POLR2F-206ENST00000443002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.25■■■□□ 2.434e-8■■□□□ 13.2
POLR2F-206ENST00000443002 E9PCH4 1651 aa30.24■■■□□ 2.43
POLR2F-206ENST00000443002 WDR7Q9Y4E6 1490 aa30.24■■■□□ 2.43
POLR2F-206ENST00000443002 SPAG9O60271 1321 aaKnown RBP30.22■■■□□ 2.43
POLR2F-206ENST00000443002 PRDM15P57071 1507 aaPredicted RBP30.21■■■□□ 2.43
POLR2F-206ENST00000443002 ZFYVE16Q7Z3T8 1539 aa30.21■■■□□ 2.43
POLR2F-206ENST00000443002 STAC3Q96MF2 364 aa30.21■■■□□ 2.43
POLR2F-206ENST00000443002 RALBP1Q15311 655 aa30.2■■■□□ 2.42
POLR2F-206ENST00000443002 ABCA9Q8IUA7 1624 aa30.19■■■□□ 2.42
POLR2F-206ENST00000443002 POLR3GLQ9BT43 218 aa30.19■■■□□ 2.42
POLR2F-206ENST00000443002 DEPDC5O75140 1603 aa30.17■■■□□ 2.42
POLR2F-206ENST00000443002 BRD4O60885 1362 aaPredicted RBP30.15■■■□□ 2.42
POLR2F-206ENST00000443002 RGL3Q3MIN7 710 aa30.14■■■□□ 2.42
POLR2F-206ENST00000443002 TRPM2O94759 1503 aa30.12■■■□□ 2.41
POLR2F-206ENST00000443002 WASHC2CQ9Y4E1 1318 aa30.12■■■□□ 2.41
POLR2F-206ENST00000443002 PTPRTO14522 1441 aa30.12■■■□□ 2.41
POLR2F-206ENST00000443002 INO80Q9ULG1 1556 aaPredicted RBP30.12■■■□□ 2.41
POLR2F-206ENST00000443002 PNISRQ8TF01 805 aaKnown RBP30.11■■■□□ 2.41
POLR2F-206ENST00000443002 FANCAO15360 1455 aa30.11■■■□□ 2.41
POLR2F-206ENST00000443002 COL17A1Q9UMD9 1497 aaPredicted RBP30.11■■■□□ 2.41
POLR2F-206ENST00000443002 MYBBP1AQ9BQG0 1328 aaKnown RBP30.11■■■□□ 2.41
POLR2F-206ENST00000443002 SMG6Q86US8 1419 aaKnown RBP30.1■■■□□ 2.41
POLR2F-206ENST00000443002 RNF17Q9BXT8 1623 aaKnown RBP30.1■■■□□ 2.41
POLR2F-206ENST00000443002 MYT1Q01538 1121 aa30.08■■■□□ 2.41
POLR2F-206ENST00000443002 NBPF1Q3BBV0 1214 aa30.08■■■□□ 2.41
POLR2F-206ENST00000443002 ATP7AQ04656 1500 aa30.08■■■□□ 2.41
POLR2F-206ENST00000443002 VWDEQ8N2E2 1590 aa30.08■■■□□ 2.41
POLR2F-206ENST00000443002 TMC1Q8TDI8 760 aa30.08■■■□□ 2.41
POLR2F-206ENST00000443002 TET3O43151 1660 aa30.07■■■□□ 2.4
POLR2F-206ENST00000443002 NEURL4Q96JN8 1562 aa30.07■■■□□ 2.4
POLR2F-206ENST00000443002 AFAP1Q8N556 730 aa30.06■■■□□ 2.4
POLR2F-206ENST00000443002 LRPPRCP42704 1394 aaKnown RBP30.06■■■□□ 2.4
POLR2F-206ENST00000443002 KANK1Q14678 1352 aa30.05■■■□□ 2.4
POLR2F-206ENST00000443002 TESK2Q96S53 571 aa30.04■■■□□ 2.4
POLR2F-206ENST00000443002 CEP152O94986 1710 aa30.03■■■□□ 2.4
POLR2F-206ENST00000443002 SPHKAPQ2M3C7 1700 aa30.03■■■□□ 2.4
POLR2F-206ENST00000443002 PPP4R2Q9NY27 417 aa30.02■■■□□ 2.4
POLR2F-206ENST00000443002 PARD3Q8TEW0 1356 aa30.02■■■□□ 2.4
POLR2F-206ENST00000443002 ADGRL1O94910 1474 aa30■■■□□ 2.39
POLR2F-206ENST00000443002 MADDQ8WXG6 1647 aa29.99■■■□□ 2.39
POLR2F-206ENST00000443002 SCAPERQ9BY12 1400 aa29.98■■■□□ 2.39
POLR2F-206ENST00000443002 PER1O15534 1290 aaPredicted RBP29.98■■■□□ 2.39
POLR2F-206ENST00000443002 TMF1P82094 1093 aa29.98■■■□□ 2.39
POLR2F-206ENST00000443002 ASXL2Q76L83 1435 aa29.98■■■□□ 2.39
POLR2F-206ENST00000443002 NUDCQ9Y266 331 aa29.97■■■□□ 2.39
POLR2F-206ENST00000443002 NLRP13Q86W25 1043 aa29.96■■■□□ 2.39
POLR2F-206ENST00000443002 INSRP06213 1382 aa29.96■■■□□ 2.39
POLR2F-206ENST00000443002 CLTCL1P53675 1640 aa29.93■■■□□ 2.38
POLR2F-206ENST00000443002 DISP3Q9P2K9 1392 aa29.93■■■□□ 2.38
POLR2F-206ENST00000443002 RNF123Q5XPI4 1314 aa29.92■■■□□ 2.38
POLR2F-206ENST00000443002 ZMYM4Q5VZL5 1548 aa29.92■■■□□ 2.38
POLR2F-206ENST00000443002 IQGAP1P46940 1657 aa29.92■■■□□ 2.38
POLR2F-206ENST00000443002 KIAA1210Q9ULL0 1709 aa29.91■■■□□ 2.38
POLR2F-206ENST00000443002 MROH1Q8NDA8 1641 aa29.88■■■□□ 2.37
POLR2F-206ENST00000443002 IRX6P78412 446 aaPredicted RBP29.87■■■□□ 2.37
POLR2F-206ENST00000443002 CFAP74Q9C0B2 1584 aa29.87■■■□□ 2.37
POLR2F-206ENST00000443002 ZNF518AQ6AHZ1 1483 aa29.87■■■□□ 2.37
POLR2F-206ENST00000443002 SCAF11Q99590 1463 aaKnown RBP29.87■■■□□ 2.37
POLR2F-206ENST00000443002 LMTK2Q8IWU2 1503 aa29.86■■■□□ 2.37
POLR2F-206ENST00000443002 CDCA8Q53HL2 280 aa29.86■■■□□ 2.37
POLR2F-206ENST00000443002 KIF3BO15066 747 aa29.85■■■□□ 2.37
POLR2F-206ENST00000443002 SLC24A1O60721 1099 aa29.85■■■□□ 2.37
POLR2F-206ENST00000443002 CNGB1Q14028 1251 aaPredicted RBP29.85■■■□□ 2.37
POLR2F-206ENST00000443002 KIDINS220Q9ULH0 1771 aa29.82■■■□□ 2.37
POLR2F-206ENST00000443002 NPM1P06748 294 aaKnown RBP eCLIP29.82■■■□□ 2.36
POLR2F-206ENST00000443002 MYOM2P54296 1465 aa29.81■■■□□ 2.36
POLR2F-206ENST00000443002 RBM19Q9Y4C8 960 aaKnown RBP29.81■■■□□ 2.36
POLR2F-206ENST00000443002 EFCAB6Q5THR3 1501 aa29.81■■■□□ 2.36
POLR2F-206ENST00000443002 OSCARQ8IYS5 282 aa29.8■■■□□ 2.36
POLR2F-206ENST00000443002 PANK3Q9H999 370 aa29.8■■■□□ 2.36
POLR2F-206ENST00000443002 EIF3AQ14152 1382 aaKnown RBP29.79■■■□□ 2.36
POLR2F-206ENST00000443002 PDE3BQ13370 1112 aa29.79■■■□□ 2.36
POLR2F-206ENST00000443002 MYT1LQ9UL68 1186 aa29.75■■■□□ 2.35
POLR2F-206ENST00000443002 MLH3Q9UHC1 1453 aa29.75■■■□□ 2.35
POLR2F-206ENST00000443002 SYNMO15061 1565 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms