RNA–Protein interactions for RNA: ENST00000443002.5

POLR2F-206, Transcript of RNA polymerase II subunit F, humanhuman

TSL 2

Gene POLR2F, Length 1,890 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-206ENST00000443002 NISCHQ9Y2I1 1504 aa47.21■■■■■ 5.15
POLR2F-206ENST00000443002 CCDC180Q9P1Z9 1646 aa40.58■■■■■ 4.09
POLR2F-206ENST00000443002 ZCCHC6Q5VYS8 1495 aaKnown RBP39.9■■■■□ 3.98
POLR2F-206ENST00000443002 SHROOM4Q9ULL8 1493 aa39.28■■■■□ 3.88
POLR2F-206ENST00000443002 DCAF1Q9Y4B6 1507 aa39.09■■■■□ 3.85
POLR2F-206ENST00000443002 DCAF8L2P0C7V8 631 aa38.56■■■■□ 3.76
POLR2F-206ENST00000443002 SUPT5HO00267 1087 aaKnown RBP38.44■■■■□ 3.74
POLR2F-206ENST00000443002 MYO15BQ96JP2 1530 aa38.19■■■■□ 3.7
POLR2F-206ENST00000443002 ABCC9O60706 1549 aa37.55■■■■□ 3.6
POLR2F-206ENST00000443002 NACADO15069 1562 aa37.55■■■■□ 3.6
POLR2F-206ENST00000443002 CHIC1Q5VXU3 224 aa37.5■■■■□ 3.59
POLR2F-206ENST00000443002 SCRIBQ14160 1630 aa37.44■■■■□ 3.58
POLR2F-206ENST00000443002 RSF1Q96T23 1441 aaPredicted RBP37.1■■■■□ 3.53
POLR2F-206ENST00000443002 RB1CC1Q8TDY2 1594 aa36.91■■■■□ 3.5
POLR2F-206ENST00000443002 CECR2Q9BXF3 1484 aa36.56■■■■□ 3.44
POLR2F-206ENST00000443002 MROH2BQ7Z745 1585 aa36.5■■■■□ 3.43
POLR2F-206ENST00000443002 BAZ1AQ9NRL2 1556 aaPredicted RBP36.36■■■■□ 3.41
POLR2F-206ENST00000443002 WIZO95785 1651 aa36.24■■■■□ 3.39
POLR2F-206ENST00000443002 UNC13AQ9UPW8 1703 aa36.16■■■■□ 3.38
POLR2F-206ENST00000443002 TRIM41Q8WV44 630 aa36.1■■■■□ 3.37
POLR2F-206ENST00000443002 LOC105371045A0A1W2PR82 267 aa36.06■■■■□ 3.36
POLR2F-206ENST00000443002 SMARCA4P51532 1647 aa36.01■■■■□ 3.35
POLR2F-206ENST00000443002 TOP2AP11388 1531 aaKnown RBP35.93■■■■□ 3.34
POLR2F-206ENST00000443002 EIF4G1Q04637 1599 aaKnown RBP35.81■■■■□ 3.32
POLR2F-206ENST00000443002 BICRAQ9NZM4 1560 aa35.78■■■■□ 3.32
POLR2F-206ENST00000443002 HRCP23327 699 aa35.72■■■■□ 3.31
POLR2F-206ENST00000443002 PCGF6Q9BYE7 350 aa35.7■■■■□ 3.31
POLR2F-206ENST00000443002 SMARCA2P51531 1590 aa35.62■■■■□ 3.29
POLR2F-206ENST00000443002 CCDC88BA6NC98 1476 aa35.6■■■■□ 3.29
POLR2F-206ENST00000443002 PEG3Q9GZU2 1588 aa35.57■■■■□ 3.29
POLR2F-206ENST00000443002 TRIM26Q12899 539 aaPredicted RBP35.48■■■■□ 3.27
POLR2F-206ENST00000443002 PABPN1Q86U42 306 aaKnown RBP eCLIP35.41■■■■□ 3.26
POLR2F-206ENST00000443002 FAM9AQ8IZU1 332 aaPredicted RBP35.41■■■■□ 3.26
POLR2F-206ENST00000443002 ABCC8Q09428 1581 aa35.18■■■■□ 3.22
POLR2F-206ENST00000443002 ATAD2BQ9ULI0 1458 aa35.15■■■■□ 3.22
POLR2F-206ENST00000443002 EEA1Q15075 1411 aa35.09■■■■□ 3.21
POLR2F-206ENST00000443002 BAZ1BQ9UIG0 1483 aaKnown RBP35■■■■□ 3.19
POLR2F-206ENST00000443002 WRNQ14191 1432 aaPredicted RBP eCLIP34.88■■■■□ 3.17
POLR2F-206ENST00000443002 SOGA1O94964 1423 aa34.81■■■■□ 3.16
POLR2F-206ENST00000443002 EHMT2Q96KQ7 1210 aa34.8■■■■□ 3.16
POLR2F-206ENST00000443002 TNIKQ9UKE5 1360 aa34.76■■■■□ 3.16
POLR2F-206ENST00000443002 ZEB1P37275 1124 aaPredicted RBP34.75■■■■□ 3.15
POLR2F-206ENST00000443002 CSRNP3Q8WYN3 585 aa34.75■■■■□ 3.15
POLR2F-206ENST00000443002 HMGXB3Q12766 1538 aa34.7■■■■□ 3.14
POLR2F-206ENST00000443002 NCAPD3P42695 1498 aa34.67■■■■□ 3.14
POLR2F-206ENST00000443002 SYNJ1O43426 1573 aa34.64■■■■□ 3.14
POLR2F-206ENST00000443002 CEP162Q5TB80 1403 aa34.61■■■■□ 3.13
POLR2F-206ENST00000443002 GOLGA3Q08378 1498 aa34.59■■■■□ 3.13
POLR2F-206ENST00000443002 RUSC2Q8N2Y8 1516 aa34.59■■■■□ 3.13
POLR2F-206ENST00000443002 PPARGC1BQ86YN6 1023 aaKnown RBP34.57■■■■□ 3.12
POLR2F-206ENST00000443002 KIF21BO75037 1637 aa34.5■■■■□ 3.11
POLR2F-206ENST00000443002 CEP164Q9UPV0 1460 aa34.48■■■■□ 3.11
POLR2F-206ENST00000443002 TOP2BQ02880 1626 aa34.45■■■■□ 3.1
POLR2F-206ENST00000443002 BIVM-ERCC5R4GMW8 1640 aa34.38■■■■□ 3.09
POLR2F-206ENST00000443002 UBTFP17480 764 aaKnown RBP34.37■■■■□ 3.09
POLR2F-206ENST00000443002 CFTRP13569 1480 aa34.23■■■■□ 3.07
POLR2F-206ENST00000443002 CLIP1P30622 1438 aa34.07■■■■□ 3.04
POLR2F-206ENST00000443002 ERICH3Q5RHP9 1530 aa34.07■■■■□ 3.04
POLR2F-206ENST00000443002 PRDM2Q13029 1718 aa34.06■■■■□ 3.04
POLR2F-206ENST00000443002 RAPGEF2Q9Y4G8 1499 aa34.05■■■■□ 3.04
POLR2F-206ENST00000443002 CUX1P39880 1505 aa34.05■■■■□ 3.04
POLR2F-206ENST00000443002 PRXQ9BXM0 1461 aa33.99■■■■□ 3.03
POLR2F-206ENST00000443002 VPS8Q8N3P4 1428 aa33.97■■■■□ 3.03
POLR2F-206ENST00000443002 KIF27Q86VH2 1401 aa33.91■■■■□ 3.02
POLR2F-206ENST00000443002 CADPSQ9ULU8 1353 aa33.87■■■■□ 3.01
POLR2F-206ENST00000443002 CCER1Q8TC90 406 aaPredicted RBP33.82■■■■□ 3.01
POLR2F-206ENST00000443002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.77■■■■□ 3
POLR2F-206ENST00000443002 CC2D2AQ9P2K1 1620 aa33.77■■■■□ 3
POLR2F-206ENST00000443002 APLP2Q06481 763 aa33.69■■■□□ 2.98
POLR2F-206ENST00000443002 TTBK1Q5TCY1 1321 aaPredicted RBP33.65■■■□□ 2.98
POLR2F-206ENST00000443002 ARAP1Q96P48 1450 aa33.57■■■□□ 2.96
POLR2F-206ENST00000443002 CUX2O14529 1486 aa33.5■■■□□ 2.95
POLR2F-206ENST00000443002 IGF1RP08069 1367 aa33.49■■■□□ 2.95
POLR2F-206ENST00000443002 FGD5Q6ZNL6 1462 aa33.49■■■□□ 2.95
POLR2F-206ENST00000443002 FANCD2Q9BXW9 1451 aa33.46■■■□□ 2.95
POLR2F-206ENST00000443002 DNMBPQ6XZF7 1577 aa33.38■■■□□ 2.93
POLR2F-206ENST00000443002 ARHGAP35Q9NRY4 1499 aa33.36■■■□□ 2.93
POLR2F-206ENST00000443002 RANGAP1P46060 587 aaPredicted RBP33.35■■■□□ 2.93
POLR2F-206ENST00000443002 CARMIL1Q5VZK9 1371 aa33.34■■■□□ 2.93
POLR2F-206ENST00000443002 LAMC3Q9Y6N6 1575 aa33.27■■■□□ 2.92
POLR2F-206ENST00000443002 ABCA10Q8WWZ4 1543 aa33.26■■■□□ 2.92
POLR2F-206ENST00000443002 HNRNPUL2Q1KMD3 747 aaKnown RBP33.24■■■□□ 2.91
POLR2F-206ENST00000443002 TOPBP1Q92547 1522 aa33.24■■■□□ 2.91
POLR2F-206ENST00000443002 MAP3K1Q13233 1512 aa33.22■■■□□ 2.91
POLR2F-206ENST00000443002 RRBP1Q9P2E9 1410 aaKnown RBP33.18■■■□□ 2.9
POLR2F-206ENST00000443002 POLA1P09884 1462 aaPredicted RBP33.16■■■□□ 2.9
POLR2F-206ENST00000443002 KANK4Q5T7N3 995 aaPredicted RBP33.12■■■□□ 2.89
POLR2F-206ENST00000443002 CLSPNQ9HAW4 1339 aa33.1■■■□□ 2.89
POLR2F-206ENST00000443002 NESP48681 1621 aa33.1■■■□□ 2.89
POLR2F-206ENST00000443002 CUL7Q14999 1698 aa33.09■■■□□ 2.89
POLR2F-206ENST00000443002 RAD54L2Q9Y4B4 1467 aa33.05■■■□□ 2.88
POLR2F-206ENST00000443002 FHAD1B1AJZ9 1412 aa33.04■■■□□ 2.88
POLR2F-206ENST00000443002 TIAM1Q13009 1591 aa33.01■■■□□ 2.87
POLR2F-206ENST00000443002 PDS5BQ9NTI5 1447 aa33■■■□□ 2.87
POLR2F-206ENST00000443002 DIEXFQ68CQ4 756 aaKnown RBP32.99■■■□□ 2.87
POLR2F-206ENST00000443002 WDR97A6NE52 1622 aa32.98■■■□□ 2.87
POLR2F-206ENST00000443002 EFCAB5A4FU69 1503 aa32.97■■■□□ 2.87
POLR2F-206ENST00000443002 ZNF316A6NFI3 1004 aaPredicted RBP32.97■■■□□ 2.87
POLR2F-206ENST00000443002 URB2Q14146 1524 aaKnown RBP32.96■■■□□ 2.87
POLR2F-206ENST00000443002 CCNB3Q8WWL7 1395 aa32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms