RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 MYOM3Q5VTT5 1437 aa18.53■□□□□ 0.56
TTC28-203ENST00000442232 MAST1Q9Y2H9 1570 aa18.52■□□□□ 0.56
TTC28-203ENST00000442232 MIA2Q96PC5 1412 aa18.51■□□□□ 0.55
TTC28-203ENST00000442232 KANK4Q5T7N3 995 aaPredicted RBP18.49■□□□□ 0.55
TTC28-203ENST00000442232 PLA2R1Q13018 1463 aa18.49■□□□□ 0.55
TTC28-203ENST00000442232 WASHC2CQ9Y4E1 1318 aa18.49■□□□□ 0.55
TTC28-203ENST00000442232 EIF2AK4Q9P2K8 1649 aaKnown RBP18.48■□□□□ 0.55
TTC28-203ENST00000442232 A2ML1A8K2U0 1454 aa18.47■□□□□ 0.55
TTC28-203ENST00000442232 ZC3H13Q5T200 1668 aaKnown RBP18.47■□□□□ 0.55
TTC28-203ENST00000442232 PZPP20742 1482 aa18.46■□□□□ 0.55
TTC28-203ENST00000442232 RNF17Q9BXT8 1623 aaKnown RBP18.46■□□□□ 0.55
TTC28-203ENST00000442232 TNRQ92752 1358 aa18.45■□□□□ 0.54
TTC28-203ENST00000442232 PKD2Q13563 968 aa18.45■□□□□ 0.54
TTC28-203ENST00000442232 CROCC2H7BZ55 1655 aa18.44■□□□□ 0.54
TTC28-203ENST00000442232 DNMT1P26358 1616 aaKnown RBP18.44■□□□□ 0.54
TTC28-203ENST00000442232 NCKAP5LQ9HCH0 1330 aa18.44■□□□□ 0.54
TTC28-203ENST00000442232 POLR1AO95602 1720 aaPredicted RBP18.43■□□□□ 0.54
TTC28-203ENST00000442232 PTPN23Q9H3S7 1636 aa18.43■□□□□ 0.54
TTC28-203ENST00000442232 DUOX2Q9NRD8 1548 aa18.42■□□□□ 0.54
TTC28-203ENST00000442232 TCOF1Q13428 1488 aaKnown RBP18.41■□□□□ 0.54
TTC28-203ENST00000442232 IQSEC2Q5JU85 1478 aa18.41■□□□□ 0.54
TTC28-203ENST00000442232 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
TTC28-203ENST00000442232 SHANK2Q9UPX8 1470 aa18.4■□□□□ 0.54
TTC28-203ENST00000442232 FBXO31Q5XUX0 539 aaPredicted RBP18.39■□□□□ 0.53
TTC28-203ENST00000442232 NLRP1Q9C000 1473 aa18.39■□□□□ 0.53
TTC28-203ENST00000442232 ABCC3O15438 1527 aa18.39■□□□□ 0.53
TTC28-203ENST00000442232 CEP152O94986 1710 aa18.38■□□□□ 0.53
TTC28-203ENST00000442232 FGD6Q6ZV73 1430 aa18.36■□□□□ 0.53
TTC28-203ENST00000442232 KIF15Q9NS87 1388 aa18.36■□□□□ 0.53
TTC28-203ENST00000442232 UGGT1Q9NYU2 1555 aa18.35■□□□□ 0.53
TTC28-203ENST00000442232 MROH1Q8NDA8 1641 aa18.34■□□□□ 0.53
TTC28-203ENST00000442232 DAPK1P53355 1430 aa18.34■□□□□ 0.53
TTC28-203ENST00000442232 ERBINQ96RT1 1412 aa18.34■□□□□ 0.53
TTC28-203ENST00000442232 ZNF335Q9H4Z2 1342 aaPredicted RBP18.34■□□□□ 0.53
TTC28-203ENST00000442232 CFAP65Q6ZU64 1925 aaKnown RBP18.33■□□□□ 0.53
TTC28-203ENST00000442232 ABCC5O15440 1437 aa18.33■□□□□ 0.53
TTC28-203ENST00000442232 THEMISQ8N1K5 641 aaPredicted RBP18.33■□□□□ 0.52
TTC28-203ENST00000442232 SPATA31D1Q6ZQQ2 1576 aa18.33■□□□□ 0.52
TTC28-203ENST00000442232 PRDM15P57071 1507 aaPredicted RBP18.32■□□□□ 0.52
TTC28-203ENST00000442232 NEURL4Q96JN8 1562 aa18.31■□□□□ 0.52
TTC28-203ENST00000442232 ERVK-7P63135 1459 aa18.31■□□□□ 0.52
TTC28-203ENST00000442232 ANKLE2Q86XL3 938 aa18.3■□□□□ 0.52
TTC28-203ENST00000442232 RRP7BPQ9NSQ0 103 aa18.3■□□□□ 0.52
TTC28-203ENST00000442232 KANK1Q14678 1352 aa18.3■□□□□ 0.52
TTC28-203ENST00000442232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.52
TTC28-203ENST00000442232 DEPDC5O75140 1603 aa18.29■□□□□ 0.52
TTC28-203ENST00000442232 ANKRD30AQ9BXX3 1397 aa18.29■□□□□ 0.52
TTC28-203ENST00000442232 IQGAP1P46940 1657 aa18.26■□□□□ 0.51
TTC28-203ENST00000442232 CPS1P31327 1500 aa18.26■□□□□ 0.51
TTC28-203ENST00000442232 UBAP1LF5GYI3 381 aa18.25■□□□□ 0.51
TTC28-203ENST00000442232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.25■□□□□ 0.51
TTC28-203ENST00000442232 CHIC2Q9UKJ5 165 aa18.25■□□□□ 0.51
TTC28-203ENST00000442232 NPHP4O75161 1426 aaPredicted RBP18.24■□□□□ 0.51
TTC28-203ENST00000442232 UBR1Q8IWV7 1749 aa18.24■□□□□ 0.51
TTC28-203ENST00000442232 ARHGAP31Q2M1Z3 1444 aa18.23■□□□□ 0.51
TTC28-203ENST00000442232 MED14O60244 1454 aa18.23■□□□□ 0.51
TTC28-203ENST00000442232 FAM50AQ14320 339 aaKnown RBP18.23■□□□□ 0.51
TTC28-203ENST00000442232 ADGRL2O95490 1459 aa18.2■□□□□ 0.5
TTC28-203ENST00000442232 VWDEQ8N2E2 1590 aa18.19■□□□□ 0.5
TTC28-203ENST00000442232 LMTK2Q8IWU2 1503 aa18.18■□□□□ 0.5
TTC28-203ENST00000442232 DISP3Q9P2K9 1392 aa18.18■□□□□ 0.5
TTC28-203ENST00000442232 STAG3Q9UJ98 1225 aa18.17■□□□□ 0.5
TTC28-203ENST00000442232 SCAF11Q99590 1463 aaKnown RBP18.17■□□□□ 0.5
TTC28-203ENST00000442232 PIK3C2BO00750 1634 aa18.16■□□□□ 0.5
TTC28-203ENST00000442232 EFCAB6Q5THR3 1501 aa18.16■□□□□ 0.5
TTC28-203ENST00000442232 SCAF1Q9H7N4 1312 aaKnown RBP18.16■□□□□ 0.5
TTC28-203ENST00000442232 SYNMO15061 1565 aa18.16■□□□□ 0.5
TTC28-203ENST00000442232 KDM5AP29375 1690 aaKnown RBP18.15■□□□□ 0.5
TTC28-203ENST00000442232 SLIT1O75093 1534 aa18.14■□□□□ 0.49
TTC28-203ENST00000442232 TOM1O60784 492 aa18.14■□□□□ 0.49
TTC28-203ENST00000442232 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
TTC28-203ENST00000442232 ANKRD50Q9ULJ7 1429 aa18.14■□□□□ 0.49
TTC28-203ENST00000442232 ARHGAP23Q9P227 1491 aa18.13■□□□□ 0.49
TTC28-203ENST00000442232 TXNDC2Q86VQ3 553 aa18.11■□□□□ 0.49
TTC28-203ENST00000442232 TET3O43151 1660 aa18.1■□□□□ 0.49
TTC28-203ENST00000442232 PIP4K2BP78356 416 aa18.1■□□□□ 0.49
TTC28-203ENST00000442232 STRCP1A6NGW2 1772 aa18.09■□□□□ 0.49
TTC28-203ENST00000442232 GCC2Q8IWJ2 1684 aa18.09■□□□□ 0.49
TTC28-203ENST00000442232 ADGRB3O60242 1522 aa18.08■□□□□ 0.49
TTC28-203ENST00000442232 RPRD2Q5VT52 1461 aaKnown RBP18.08■□□□□ 0.49
TTC28-203ENST00000442232 TMEM2Q9UHN6 1383 aa18.07■□□□□ 0.48
TTC28-203ENST00000442232 UNC13BO14795 1591 aa18.07■□□□□ 0.48
TTC28-203ENST00000442232 LTKP29376 864 aa18.06■□□□□ 0.48
TTC28-203ENST00000442232 LRRC7Q96NW7 1537 aa18.06■□□□□ 0.48
TTC28-203ENST00000442232 NOS1P29475 1434 aa18.06■□□□□ 0.48
TTC28-203ENST00000442232 IDI1Q13907 227 aa18.04■□□□□ 0.48
TTC28-203ENST00000442232 SLC52A1Q9NWF4 448 aa18.04■□□□□ 0.48
TTC28-203ENST00000442232 ROCK1Q13464 1354 aa18.04■□□□□ 0.48
TTC28-203ENST00000442232 MYO5BQ9ULV0 1848 aa18.01■□□□□ 0.47
TTC28-203ENST00000442232 IQGAP3Q86VI3 1631 aa18.01■□□□□ 0.47
TTC28-203ENST00000442232 HSPA1LP34931 641 aa18■□□□□ 0.47
TTC28-203ENST00000442232 ITGAEP38570 1179 aa18■□□□□ 0.47
TTC28-203ENST00000442232 BCANQ96GW7 911 aa18■□□□□ 0.47
TTC28-203ENST00000442232 E9PCH4 1651 aa17.99■□□□□ 0.47
TTC28-203ENST00000442232 XIRP1Q702N8 1843 aaKnown RBP17.98■□□□□ 0.47
TTC28-203ENST00000442232 PPP1R15AO75807 674 aaPredicted RBP17.97■□□□□ 0.47
TTC28-203ENST00000442232 HDGFP51858 240 aaKnown RBP17.97■□□□□ 0.47
TTC28-203ENST00000442232 PPARGC1BQ86YN6 1023 aaKnown RBP17.97■□□□□ 0.47
TTC28-203ENST00000442232 ALKQ9UM73 1620 aa17.97■□□□□ 0.47
TTC28-203ENST00000442232 TMEM131LA2VDJ0 1609 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms