RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 CEP170BQ9Y4F5 1589 aaPredicted RBP32.7■■■□□ 2.83
CPNE1-219ENST00000440240 ZNF142P52746 1687 aaPredicted RBP32.69■■■□□ 2.82
CPNE1-219ENST00000440240 FAM135AQ9P2D6 1515 aa32.69■■■□□ 2.82
CPNE1-219ENST00000440240 MIA2Q96PC5 1412 aa32.68■■■□□ 2.82
CPNE1-219ENST00000440240 LTBP4Q8N2S1 1624 aa32.67■■■□□ 2.82
CPNE1-219ENST00000440240 FBXO31Q5XUX0 539 aaPredicted RBP32.67■■■□□ 2.82
CPNE1-219ENST00000440240 KDM5DQ9BY66 1539 aa32.66■■■□□ 2.82
CPNE1-219ENST00000440240 A2ML1A8K2U0 1454 aa32.65■■■□□ 2.82
CPNE1-219ENST00000440240 APLP2Q06481 763 aa32.64■■■□□ 2.82
CPNE1-219ENST00000440240 TCOF1Q13428 1488 aaKnown RBP32.64■■■□□ 2.82
CPNE1-219ENST00000440240 TNRQ92752 1358 aa32.64■■■□□ 2.82
CPNE1-219ENST00000440240 MYOM3Q5VTT5 1437 aa32.63■■■□□ 2.81
CPNE1-219ENST00000440240 PZPP20742 1482 aa32.62■■■□□ 2.81
CPNE1-219ENST00000440240 IQSEC2Q5JU85 1478 aa32.61■■■□□ 2.81
CPNE1-219ENST00000440240 MAST1Q9Y2H9 1570 aa32.58■■■□□ 2.81
CPNE1-219ENST00000440240 ZNF335Q9H4Z2 1342 aaPredicted RBP32.58■■■□□ 2.81
CPNE1-219ENST00000440240 DNMT1P26358 1616 aaKnown RBP32.56■■■□□ 2.8
CPNE1-219ENST00000440240 THEMISQ8N1K5 641 aaPredicted RBP32.54■■■□□ 2.8
CPNE1-219ENST00000440240 NLRP1Q9C000 1473 aa32.49■■■□□ 2.79
CPNE1-219ENST00000440240 ANKLE2Q86XL3 938 aa32.49■■■□□ 2.79
CPNE1-219ENST00000440240 RNF17Q9BXT8 1623 aaKnown RBP32.47■■■□□ 2.79
CPNE1-219ENST00000440240 EIF2AK4Q9P2K8 1649 aaKnown RBP32.45■■■□□ 2.79
CPNE1-219ENST00000440240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.44■■■□□ 2.787e-10■■□□□ 13.2
CPNE1-219ENST00000440240 ABCC3O15438 1527 aa32.43■■■□□ 2.78
CPNE1-219ENST00000440240 DUOX2Q9NRD8 1548 aa32.43■■■□□ 2.78
CPNE1-219ENST00000440240 UBAP1LF5GYI3 381 aa32.41■■■□□ 2.78
CPNE1-219ENST00000440240 ABCC5O15440 1437 aa32.41■■■□□ 2.78
CPNE1-219ENST00000440240 UGGT1Q9NYU2 1555 aa32.41■■■□□ 2.78
CPNE1-219ENST00000440240 RRP7BPQ9NSQ0 103 aa32.4■■■□□ 2.78
CPNE1-219ENST00000440240 ZC3H13Q5T200 1668 aaKnown RBP32.4■■■□□ 2.78
CPNE1-219ENST00000440240 KIF15Q9NS87 1388 aa32.39■■■□□ 2.78
CPNE1-219ENST00000440240 SHANK2Q9UPX8 1470 aa32.38■■■□□ 2.77
CPNE1-219ENST00000440240 PTPN23Q9H3S7 1636 aa32.36■■■□□ 2.77
CPNE1-219ENST00000440240 SPATA31D1Q6ZQQ2 1576 aa32.35■■■□□ 2.77
CPNE1-219ENST00000440240 POLR1AO95602 1720 aaPredicted RBP32.34■■■□□ 2.77
CPNE1-219ENST00000440240 NEURL4Q96JN8 1562 aa32.34■■■□□ 2.77
CPNE1-219ENST00000440240 FGD6Q6ZV73 1430 aa32.34■■■□□ 2.77
CPNE1-219ENST00000440240 ERBINQ96RT1 1412 aa32.34■■■□□ 2.77
CPNE1-219ENST00000440240 MROH1Q8NDA8 1641 aa32.33■■■□□ 2.77
CPNE1-219ENST00000440240 ERVK-7P63135 1459 aa32.33■■■□□ 2.77
CPNE1-219ENST00000440240 DAPK1P53355 1430 aa32.33■■■□□ 2.77
CPNE1-219ENST00000440240 DISP3Q9P2K9 1392 aa32.32■■■□□ 2.77
CPNE1-219ENST00000440240 MED14O60244 1454 aa32.3■■■□□ 2.76
CPNE1-219ENST00000440240 NPHP4O75161 1426 aaPredicted RBP32.3■■■□□ 2.76
CPNE1-219ENST00000440240 CPS1P31327 1500 aa32.28■■■□□ 2.76
CPNE1-219ENST00000440240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.28■■■□□ 2.763e-9■□□□□ 9.4
CPNE1-219ENST00000440240 ARHGAP31Q2M1Z3 1444 aa32.27■■■□□ 2.76
CPNE1-219ENST00000440240 DEPDC5O75140 1603 aa32.27■■■□□ 2.76
CPNE1-219ENST00000440240 ANKRD30AQ9BXX3 1397 aa32.27■■■□□ 2.76
CPNE1-219ENST00000440240 CHIC2Q9UKJ5 165 aa32.26■■■□□ 2.75
CPNE1-219ENST00000440240 CROCC2H7BZ55 1655 aa32.26■■■□□ 2.75
CPNE1-219ENST00000440240 KANK1Q14678 1352 aa32.25■■■□□ 2.75
CPNE1-219ENST00000440240 CEP152O94986 1710 aa32.23■■■□□ 2.75
CPNE1-219ENST00000440240 PRDM15P57071 1507 aaPredicted RBP32.23■■■□□ 2.75
CPNE1-219ENST00000440240 TOM1O60784 492 aa32.23■■■□□ 2.75
CPNE1-219ENST00000440240 CFAP65Q6ZU64 1925 aaKnown RBP32.2■■■□□ 2.74
CPNE1-219ENST00000440240 VWDEQ8N2E2 1590 aa32.17■■■□□ 2.74
CPNE1-219ENST00000440240 FAM50AQ14320 339 aaKnown RBP32.15■■■□□ 2.74
CPNE1-219ENST00000440240 TXNDC2Q86VQ3 553 aa32.14■■■□□ 2.74
CPNE1-219ENST00000440240 SCAF1Q9H7N4 1312 aaKnown RBP32.14■■■□□ 2.74
CPNE1-219ENST00000440240 IQGAP1P46940 1657 aa32.14■■■□□ 2.74
CPNE1-219ENST00000440240 PIP4K2BP78356 416 aa32.13■■■□□ 2.73
CPNE1-219ENST00000440240 ILDR2Q71H61 639 aa32.12■■■□□ 2.73
CPNE1-219ENST00000440240 EID1Q9Y6B2 187 aa32.12■■■□□ 2.73
CPNE1-219ENST00000440240 UBR1Q8IWV7 1749 aa32.12■■■□□ 2.73
CPNE1-219ENST00000440240 STAG3Q9UJ98 1225 aa32.11■■■□□ 2.73
CPNE1-219ENST00000440240 SCAF11Q99590 1463 aaKnown RBP32.1■■■□□ 2.73
CPNE1-219ENST00000440240 LTKP29376 864 aa32.1■■■□□ 2.73
CPNE1-219ENST00000440240 LMTK2Q8IWU2 1503 aa32.08■■■□□ 2.73
CPNE1-219ENST00000440240 ARHGAP23Q9P227 1491 aa32.08■■■□□ 2.73
CPNE1-219ENST00000440240 SLIT1O75093 1534 aa32.07■■■□□ 2.72
CPNE1-219ENST00000440240 ADGRL2O95490 1459 aa32.07■■■□□ 2.72
CPNE1-219ENST00000440240 IDI1Q13907 227 aa32.05■■■□□ 2.72
CPNE1-219ENST00000440240 HSPA1LP34931 641 aa32.04■■■□□ 2.72
CPNE1-219ENST00000440240 TMEM2Q9UHN6 1383 aa32.03■■■□□ 2.72
CPNE1-219ENST00000440240 ANKRD50Q9ULJ7 1429 aa32■■■□□ 2.71
CPNE1-219ENST00000440240 LRRC7Q96NW7 1537 aa32■■■□□ 2.71
CPNE1-219ENST00000440240 PIK3C2BO00750 1634 aa31.98■■■□□ 2.71
CPNE1-219ENST00000440240 SOCS7O14512 581 aa31.98■■■□□ 2.71
CPNE1-219ENST00000440240 SLC52A1Q9NWF4 448 aa31.98■■■□□ 2.71
CPNE1-219ENST00000440240 NOS1P29475 1434 aa31.96■■■□□ 2.71
CPNE1-219ENST00000440240 EFCAB6Q5THR3 1501 aa31.95■■■□□ 2.7
CPNE1-219ENST00000440240 STRCP1A6NGW2 1772 aa31.94■■■□□ 2.7
CPNE1-219ENST00000440240 KDM5AP29375 1690 aaKnown RBP31.92■■■□□ 2.7
CPNE1-219ENST00000440240 SYNMO15061 1565 aa31.91■■■□□ 2.7
CPNE1-219ENST00000440240 RPRD2Q5VT52 1461 aaKnown RBP31.91■■■□□ 2.7
CPNE1-219ENST00000440240 ALKQ9UM73 1620 aa31.88■■■□□ 2.69
CPNE1-219ENST00000440240 ROCK1Q13464 1354 aa31.84■■■□□ 2.69
CPNE1-219ENST00000440240 KCNA6P17658 529 aa31.84■■■□□ 2.69
CPNE1-219ENST00000440240 SLC26A8Q96RN1 970 aa31.83■■■□□ 2.69
CPNE1-219ENST00000440240 HDGFP51858 240 aaKnown RBP31.82■■■□□ 2.68
CPNE1-219ENST00000440240 ADGRB3O60242 1522 aa31.81■■■□□ 2.68
CPNE1-219ENST00000440240 BCANQ96GW7 911 aa31.8■■■□□ 2.68
CPNE1-219ENST00000440240 TET3O43151 1660 aa31.78■■■□□ 2.68
CPNE1-219ENST00000440240 PROSER2Q86WR7 435 aaPredicted RBP31.75■■■□□ 2.67
CPNE1-219ENST00000440240 ITGAEP38570 1179 aa31.74■■■□□ 2.67
CPNE1-219ENST00000440240 SENP3Q9H4L4 574 aaPredicted RBP31.74■■■□□ 2.67
CPNE1-219ENST00000440240 TMEM94Q12767 1356 aa31.73■■■□□ 2.67
CPNE1-219ENST00000440240 UNC13BO14795 1591 aa31.73■■■□□ 2.67
CPNE1-219ENST00000440240 MED1Q15648 1581 aaPredicted RBP31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms