RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 MYO3AQ8NEV4 1616 aa31.81■■■□□ 2.68
NCKIPSD-206ENST00000439518 WASHC2CQ9Y4E1 1318 aa31.79■■■□□ 2.68
NCKIPSD-206ENST00000439518 ZNF142P52746 1687 aaPredicted RBP31.79■■■□□ 2.68
NCKIPSD-206ENST00000439518 CAMSAP1Q5T5Y3 1602 aa31.78■■■□□ 2.68
NCKIPSD-206ENST00000439518 PTPN23Q9H3S7 1636 aa31.77■■■□□ 2.68
NCKIPSD-206ENST00000439518 CEP170BQ9Y4F5 1589 aaPredicted RBP31.77■■■□□ 2.68
NCKIPSD-206ENST00000439518 FGD6Q6ZV73 1430 aa31.75■■■□□ 2.67
NCKIPSD-206ENST00000439518 FBXO31Q5XUX0 539 aaPredicted RBP31.75■■■□□ 2.67
NCKIPSD-206ENST00000439518 PZPP20742 1482 aa31.75■■■□□ 2.67
NCKIPSD-206ENST00000439518 RNF17Q9BXT8 1623 aaKnown RBP31.75■■■□□ 2.67
NCKIPSD-206ENST00000439518 ABCC5O15440 1437 aa31.75■■■□□ 2.67
NCKIPSD-206ENST00000439518 TCOF1Q13428 1488 aaKnown RBP31.72■■■□□ 2.67
NCKIPSD-206ENST00000439518 SHANK2Q9UPX8 1470 aa31.72■■■□□ 2.67
NCKIPSD-206ENST00000439518 EIF2AK4Q9P2K8 1649 aaKnown RBP31.71■■■□□ 2.67
NCKIPSD-206ENST00000439518 A2ML1A8K2U0 1454 aa31.71■■■□□ 2.67
NCKIPSD-206ENST00000439518 PLA2R1Q13018 1463 aa31.71■■■□□ 2.67
NCKIPSD-206ENST00000439518 TNRQ92752 1358 aa31.7■■■□□ 2.67
NCKIPSD-206ENST00000439518 DUOX2Q9NRD8 1548 aa31.7■■■□□ 2.66
NCKIPSD-206ENST00000439518 NCKAP5LQ9HCH0 1330 aa31.69■■■□□ 2.66
NCKIPSD-206ENST00000439518 CROCC2H7BZ55 1655 aa31.68■■■□□ 2.66
NCKIPSD-206ENST00000439518 DAPK1P53355 1430 aa31.67■■■□□ 2.66
NCKIPSD-206ENST00000439518 KIF15Q9NS87 1388 aa31.67■■■□□ 2.66
NCKIPSD-206ENST00000439518 ABCC3O15438 1527 aa31.66■■■□□ 2.66
NCKIPSD-206ENST00000439518 DNMT1P26358 1616 aaKnown RBP31.65■■■□□ 2.66
NCKIPSD-206ENST00000439518 MROH1Q8NDA8 1641 aa31.65■■■□□ 2.66
NCKIPSD-206ENST00000439518 PKD2Q13563 968 aa31.65■■■□□ 2.66
NCKIPSD-206ENST00000439518 RRP7BPQ9NSQ0 103 aa31.62■■■□□ 2.65
NCKIPSD-206ENST00000439518 ZC3H13Q5T200 1668 aaKnown RBP31.61■■■□□ 2.65
NCKIPSD-206ENST00000439518 LTBP4Q8N2S1 1624 aa31.6■■■□□ 2.65
NCKIPSD-206ENST00000439518 ERBINQ96RT1 1412 aa31.59■■■□□ 2.65
NCKIPSD-206ENST00000439518 NLRP1Q9C000 1473 aa31.58■■■□□ 2.65
NCKIPSD-206ENST00000439518 ANKRD30AQ9BXX3 1397 aa31.54■■■□□ 2.64
NCKIPSD-206ENST00000439518 CHIC2Q9UKJ5 165 aa31.53■■■□□ 2.64
NCKIPSD-206ENST00000439518 PRDM15P57071 1507 aaPredicted RBP31.53■■■□□ 2.64
NCKIPSD-206ENST00000439518 SPATA31D1Q6ZQQ2 1576 aa31.52■■■□□ 2.64
NCKIPSD-206ENST00000439518 CEP152O94986 1710 aa31.51■■■□□ 2.63
NCKIPSD-206ENST00000439518 ERVK-7P63135 1459 aa31.51■■■□□ 2.63
NCKIPSD-206ENST00000439518 THEMISQ8N1K5 641 aaPredicted RBP31.5■■■□□ 2.63
NCKIPSD-206ENST00000439518 ZNF335Q9H4Z2 1342 aaPredicted RBP31.49■■■□□ 2.63
NCKIPSD-206ENST00000439518 UGGT1Q9NYU2 1555 aa31.47■■■□□ 2.63
NCKIPSD-206ENST00000439518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.47■■■□□ 2.63
NCKIPSD-206ENST00000439518 DEPDC5O75140 1603 aa31.47■■■□□ 2.63
NCKIPSD-206ENST00000439518 FAM50AQ14320 339 aaKnown RBP31.47■■■□□ 2.63
NCKIPSD-206ENST00000439518 ARHGAP31Q2M1Z3 1444 aa31.47■■■□□ 2.63
NCKIPSD-206ENST00000439518 ADGRL2O95490 1459 aa31.46■■■□□ 2.63
NCKIPSD-206ENST00000439518 IQSEC2Q5JU85 1478 aa31.46■■■□□ 2.63
NCKIPSD-206ENST00000439518 NEURL4Q96JN8 1562 aa31.44■■■□□ 2.62
NCKIPSD-206ENST00000439518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.44■■■□□ 2.62
NCKIPSD-206ENST00000439518 ANKLE2Q86XL3 938 aa31.43■■■□□ 2.62
NCKIPSD-206ENST00000439518 POLR1AO95602 1720 aaPredicted RBP31.43■■■□□ 2.62
NCKIPSD-206ENST00000439518 KANK1Q14678 1352 aa31.41■■■□□ 2.62
NCKIPSD-206ENST00000439518 CFAP65Q6ZU64 1925 aaKnown RBP31.38■■■□□ 2.61
NCKIPSD-206ENST00000439518 VWDEQ8N2E2 1590 aa31.38■■■□□ 2.61
NCKIPSD-206ENST00000439518 LMTK2Q8IWU2 1503 aa31.36■■■□□ 2.61
NCKIPSD-206ENST00000439518 MED14O60244 1454 aa31.36■■■□□ 2.61
NCKIPSD-206ENST00000439518 NPHP4O75161 1426 aaPredicted RBP31.32■■■□□ 2.6
NCKIPSD-206ENST00000439518 ANKRD50Q9ULJ7 1429 aa31.32■■■□□ 2.6
NCKIPSD-206ENST00000439518 UBR1Q8IWV7 1749 aa31.29■■■□□ 2.6
NCKIPSD-206ENST00000439518 EFCAB6Q5THR3 1501 aa31.24■■■□□ 2.59
NCKIPSD-206ENST00000439518 ARHGAP23Q9P227 1491 aa31.23■■■□□ 2.59
NCKIPSD-206ENST00000439518 ROCK1Q13464 1354 aa31.23■■■□□ 2.59
NCKIPSD-206ENST00000439518 PPARGC1BQ86YN6 1023 aaKnown RBP31.23■■■□□ 2.59
NCKIPSD-206ENST00000439518 IQGAP1P46940 1657 aa31.22■■■□□ 2.59
NCKIPSD-206ENST00000439518 SLIT1O75093 1534 aa31.22■■■□□ 2.59
NCKIPSD-206ENST00000439518 CPS1P31327 1500 aa31.22■■■□□ 2.59
NCKIPSD-206ENST00000439518 NOS1P29475 1434 aa31.21■■■□□ 2.59
NCKIPSD-206ENST00000439518 PIK3C2BO00750 1634 aa31.2■■■□□ 2.58
NCKIPSD-206ENST00000439518 UBAP1LF5GYI3 381 aa31.19■■■□□ 2.58
NCKIPSD-206ENST00000439518 LTKP29376 864 aa31.19■■■□□ 2.58
NCKIPSD-206ENST00000439518 IDI1Q13907 227 aa31.19■■■□□ 2.58
NCKIPSD-206ENST00000439518 SCAF11Q99590 1463 aaKnown RBP31.19■■■□□ 2.58
NCKIPSD-206ENST00000439518 SYNMO15061 1565 aa31.18■■■□□ 2.58
NCKIPSD-206ENST00000439518 TXNDC2Q86VQ3 553 aa31.16■■■□□ 2.58
NCKIPSD-206ENST00000439518 RPRD2Q5VT52 1461 aaKnown RBP31.14■■■□□ 2.58
NCKIPSD-206ENST00000439518 KDM5AP29375 1690 aaKnown RBP31.14■■■□□ 2.58
NCKIPSD-206ENST00000439518 TMEM2Q9UHN6 1383 aa31.14■■■□□ 2.58
NCKIPSD-206ENST00000439518 UNC13BO14795 1591 aa31.13■■■□□ 2.57
NCKIPSD-206ENST00000439518 STAG3Q9UJ98 1225 aa31.12■■■□□ 2.57
NCKIPSD-206ENST00000439518 EID1Q9Y6B2 187 aa31.12■■■□□ 2.57
NCKIPSD-206ENST00000439518 TET3O43151 1660 aa31.1■■■□□ 2.57
NCKIPSD-206ENST00000439518 SLC52A1Q9NWF4 448 aa31.1■■■□□ 2.57
NCKIPSD-206ENST00000439518 ITGAEP38570 1179 aa31.09■■■□□ 2.57
NCKIPSD-206ENST00000439518 STRCP1A6NGW2 1772 aa31.05■■■□□ 2.56
NCKIPSD-206ENST00000439518 ADGRB3O60242 1522 aa31.04■■■□□ 2.56
NCKIPSD-206ENST00000439518 GCC2Q8IWJ2 1684 aa31.03■■■□□ 2.56
NCKIPSD-206ENST00000439518 RRBP1Q9P2E9 1410 aaKnown RBP31.02■■■□□ 2.56
NCKIPSD-206ENST00000439518 TOM1O60784 492 aa31.01■■■□□ 2.55
NCKIPSD-206ENST00000439518 LRRC7Q96NW7 1537 aa31.01■■■□□ 2.55
NCKIPSD-206ENST00000439518 IQGAP3Q86VI3 1631 aa31■■■□□ 2.55
NCKIPSD-206ENST00000439518 NUP155O75694 1391 aa30.98■■■□□ 2.55
NCKIPSD-206ENST00000439518 E9PCH4 1651 aa30.97■■■□□ 2.55
NCKIPSD-206ENST00000439518 ALKQ9UM73 1620 aa30.94■■■□□ 2.54
NCKIPSD-206ENST00000439518 PIP4K2BP78356 416 aa30.93■■■□□ 2.54
NCKIPSD-206ENST00000439518 TMEM131LA2VDJ0 1609 aa30.91■■■□□ 2.54
NCKIPSD-206ENST00000439518 ZFYVE9O95405 1425 aa30.91■■■□□ 2.54
NCKIPSD-206ENST00000439518 SCAF1Q9H7N4 1312 aaKnown RBP30.9■■■□□ 2.54
NCKIPSD-206ENST00000439518 SLC26A8Q96RN1 970 aa30.89■■■□□ 2.54
NCKIPSD-206ENST00000439518 DISP3Q9P2K9 1392 aa30.89■■■□□ 2.54
NCKIPSD-206ENST00000439518 MYO5BQ9ULV0 1848 aa30.87■■■□□ 2.53
NCKIPSD-206ENST00000439518 RIMS2Q9UQ26 1411 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms