RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 NPATQ14207 1427 aa21.63■■□□□ 1.05
PRAME-209ENST00000439106 CFAP65Q6ZU64 1925 aaKnown RBP21.63■■□□□ 1.05
PRAME-209ENST00000439106 ILDR1Q86SU0 546 aaPredicted RBP21.62■■□□□ 1.05
PRAME-209ENST00000439106 ABCC5O15440 1437 aa21.62■■□□□ 1.05
PRAME-209ENST00000439106 PTPRKQ15262 1439 aa21.62■■□□□ 1.05
PRAME-209ENST00000439106 MROH1Q8NDA8 1641 aa21.61■■□□□ 1.05
PRAME-209ENST00000439106 DAPK1P53355 1430 aa21.6■■□□□ 1.05
PRAME-209ENST00000439106 SHANK2Q9UPX8 1470 aa21.59■■□□□ 1.05
PRAME-209ENST00000439106 CEP170BQ9Y4F5 1589 aaPredicted RBP21.58■■□□□ 1.05
PRAME-209ENST00000439106 CAMSAP1Q5T5Y3 1602 aa21.58■■□□□ 1.04
PRAME-209ENST00000439106 ZC3H13Q5T200 1668 aaKnown RBP21.57■■□□□ 1.04
PRAME-209ENST00000439106 DUOX2Q9NRD8 1548 aa21.57■■□□□ 1.04
PRAME-209ENST00000439106 FAM135AQ9P2D6 1515 aa21.56■■□□□ 1.04
PRAME-209ENST00000439106 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
PRAME-209ENST00000439106 ABCC3O15438 1527 aa21.54■■□□□ 1.04
PRAME-209ENST00000439106 PZPP20742 1482 aa21.53■■□□□ 1.04
PRAME-209ENST00000439106 KIF15Q9NS87 1388 aa21.53■■□□□ 1.04
PRAME-209ENST00000439106 WASHC2CQ9Y4E1 1318 aa21.53■■□□□ 1.04
PRAME-209ENST00000439106 FBXO31Q5XUX0 539 aaPredicted RBP21.52■■□□□ 1.04
PRAME-209ENST00000439106 NCOA1Q15788 1441 aa21.52■■□□□ 1.04
PRAME-209ENST00000439106 RRP7BPQ9NSQ0 103 aa21.51■■□□□ 1.03
PRAME-209ENST00000439106 CHIC2Q9UKJ5 165 aa21.51■■□□□ 1.03
PRAME-209ENST00000439106 PPARGC1BQ86YN6 1023 aaKnown RBP21.5■■□□□ 1.03
PRAME-209ENST00000439106 DEPDC5O75140 1603 aa21.49■■□□□ 1.03
PRAME-209ENST00000439106 FAM50AQ14320 339 aaKnown RBP21.49■■□□□ 1.03
PRAME-209ENST00000439106 PRDM15P57071 1507 aaPredicted RBP21.49■■□□□ 1.03
PRAME-209ENST00000439106 ERBINQ96RT1 1412 aa21.47■■□□□ 1.03
PRAME-209ENST00000439106 POLR1AO95602 1720 aaPredicted RBP21.47■■□□□ 1.03
PRAME-209ENST00000439106 A2ML1A8K2U0 1454 aa21.46■■□□□ 1.03
PRAME-209ENST00000439106 TNRQ92752 1358 aa21.46■■□□□ 1.03
PRAME-209ENST00000439106 NCKAP5LQ9HCH0 1330 aa21.43■■□□□ 1.02
PRAME-209ENST00000439106 ANKRD30AQ9BXX3 1397 aa21.43■■□□□ 1.02
PRAME-209ENST00000439106 PTPRTO14522 1441 aa21.43■■□□□ 1.02
PRAME-209ENST00000439106 SPATA31D1Q6ZQQ2 1576 aa21.43■■□□□ 1.02
PRAME-209ENST00000439106 ADGRL2O95490 1459 aa21.42■■□□□ 1.02
PRAME-209ENST00000439106 PLA2R1Q13018 1463 aa21.42■■□□□ 1.02
PRAME-209ENST00000439106 DMRT2Q9Y5R5 561 aa21.41■■□□□ 1.02
PRAME-209ENST00000439106 ERVK-7P63135 1459 aa21.4■■□□□ 1.02
PRAME-209ENST00000439106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.4■■□□□ 1.025e-17■■□□□ 11.4
PRAME-209ENST00000439106 FBXO41Q8TF61 875 aa21.39■■□□□ 1.01
PRAME-209ENST00000439106 CERKQ8TCT0 537 aa21.38■■□□□ 1.01
PRAME-209ENST00000439106 NEURL4Q96JN8 1562 aa21.37■■□□□ 1.01
PRAME-209ENST00000439106 UGGT1Q9NYU2 1555 aa21.37■■□□□ 1.01
PRAME-209ENST00000439106 LTBP4Q8N2S1 1624 aa21.37■■□□□ 1.01
PRAME-209ENST00000439106 VWDEQ8N2E2 1590 aa21.36■■□□□ 1.01
PRAME-209ENST00000439106 UBR1Q8IWV7 1749 aa21.36■■□□□ 1.01
PRAME-209ENST00000439106 NLRP1Q9C000 1473 aa21.36■■□□□ 1.01
PRAME-209ENST00000439106 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.33■■□□□ 13e-13■■■■■ 30.1
PRAME-209ENST00000439106 PIK3C2BO00750 1634 aa21.31■■□□□ 1
PRAME-209ENST00000439106 PKD2Q13563 968 aa21.31■■□□□ 1
PRAME-209ENST00000439106 ANKRD50Q9ULJ7 1429 aa21.3■■□□□ 1
PRAME-209ENST00000439106 LMTK2Q8IWU2 1503 aa21.3■■□□□ 1
PRAME-209ENST00000439106 ITGAEP38570 1179 aa21.3■■□□□ 1
PRAME-209ENST00000439106 KANK1Q14678 1352 aa21.3■■□□□ 1
PRAME-209ENST00000439106 ARHGAP31Q2M1Z3 1444 aa21.29■■□□□ 1
PRAME-209ENST00000439106 EFCAB6Q5THR3 1501 aa21.29■■□□□ 1
PRAME-209ENST00000439106 UNC13BO14795 1591 aa21.29■■□□□ 1
PRAME-209ENST00000439106 ZNF335Q9H4Z2 1342 aaPredicted RBP21.29■■□□□ 1
PRAME-209ENST00000439106 SYNMO15061 1565 aa21.27■■□□□ 1
PRAME-209ENST00000439106 IQGAP1P46940 1657 aa21.27■■□□□ 1
PRAME-209ENST00000439106 GCC2Q8IWJ2 1684 aa21.27■■□□□ 1
PRAME-209ENST00000439106 TET3O43151 1660 aa21.26■□□□□ 0.99
PRAME-209ENST00000439106 MYO5BQ9ULV0 1848 aa21.26■□□□□ 0.99
PRAME-209ENST00000439106 THEMISQ8N1K5 641 aaPredicted RBP21.23■□□□□ 0.99
PRAME-209ENST00000439106 ROCK1Q13464 1354 aa21.22■□□□□ 0.99
PRAME-209ENST00000439106 E9PCH4 1651 aa21.21■□□□□ 0.99
PRAME-209ENST00000439106 STRCP1A6NGW2 1772 aa21.2■□□□□ 0.99
PRAME-209ENST00000439106 IQGAP3Q86VI3 1631 aa21.2■□□□□ 0.98
PRAME-209ENST00000439106 ANKLE2Q86XL3 938 aa21.2■□□□□ 0.98
PRAME-209ENST00000439106 NPHP4O75161 1426 aaPredicted RBP21.2■□□□□ 0.98
PRAME-209ENST00000439106 RRBP1Q9P2E9 1410 aaKnown RBP21.2■□□□□ 0.98
PRAME-209ENST00000439106 MED14O60244 1454 aa21.19■□□□□ 0.98
PRAME-209ENST00000439106 KDM5AP29375 1690 aaKnown RBP21.18■□□□□ 0.98
PRAME-209ENST00000439106 NOS1P29475 1434 aa21.17■□□□□ 0.98
PRAME-209ENST00000439106 SLIT1O75093 1534 aa21.16■□□□□ 0.98
PRAME-209ENST00000439106 ARHGAP23Q9P227 1491 aa21.15■□□□□ 0.98
PRAME-209ENST00000439106 ADGRB3O60242 1522 aa21.14■□□□□ 0.98
PRAME-209ENST00000439106 IQSEC2Q5JU85 1478 aa21.14■□□□□ 0.98
PRAME-209ENST00000439106 SCAF11Q99590 1463 aaKnown RBP21.14■□□□□ 0.98
PRAME-209ENST00000439106 RPRD2Q5VT52 1461 aaKnown RBP21.13■□□□□ 0.97
PRAME-209ENST00000439106 IDI1Q13907 227 aa21.12■□□□□ 0.97
PRAME-209ENST00000439106 LTKP29376 864 aa21.11■□□□□ 0.97
PRAME-209ENST00000439106 STAG3Q9UJ98 1225 aa21.1■□□□□ 0.97
PRAME-209ENST00000439106 CPS1P31327 1500 aa21.09■□□□□ 0.97
PRAME-209ENST00000439106 NUP155O75694 1391 aa21.08■□□□□ 0.96
PRAME-209ENST00000439106 TMEM2Q9UHN6 1383 aa21.08■□□□□ 0.96
PRAME-209ENST00000439106 TMEM131LA2VDJ0 1609 aa21.07■□□□□ 0.96
PRAME-209ENST00000439106 SPHKAPQ2M3C7 1700 aa21.07■□□□□ 0.96
PRAME-209ENST00000439106 TXNDC2Q86VQ3 553 aa21.07■□□□□ 0.96
PRAME-209ENST00000439106 XIRP1Q702N8 1843 aaKnown RBP21.05■□□□□ 0.96
PRAME-209ENST00000439106 NAIPQ13075 1403 aa21.04■□□□□ 0.96
PRAME-209ENST00000439106 SENP3Q9H4L4 574 aaPredicted RBP21.02■□□□□ 0.96
PRAME-209ENST00000439106 EID1Q9Y6B2 187 aa21.02■□□□□ 0.96
PRAME-209ENST00000439106 UBAP1LF5GYI3 381 aa21.01■□□□□ 0.95
PRAME-209ENST00000439106 SLC52A1Q9NWF4 448 aa21.01■□□□□ 0.95
PRAME-209ENST00000439106 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
PRAME-209ENST00000439106 ALKQ9UM73 1620 aa20.98■□□□□ 0.95
PRAME-209ENST00000439106 ZFYVE9O95405 1425 aa20.97■□□□□ 0.95
PRAME-209ENST00000439106 CHGAP10645 457 aaKnown RBP20.97■□□□□ 0.95
PRAME-209ENST00000439106 HFM1A2PYH4 1435 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms