RNA–Protein interactions for RNA: ENST00000437480.1

GLI3-203, Transcript of GLI family zinc finger 3, humanhuman

TSL 2 BASIC

Gene GLI3, Length 451 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-203ENST00000437480 RSPH4AQ5TD94 716 aa34.33■■■■□ 3.09
GLI3-203ENST00000437480 FBXO31Q5XUX0 539 aaPredicted RBP34.31■■■■□ 3.08
GLI3-203ENST00000437480 WASHC2CQ9Y4E1 1318 aa34.3■■■■□ 3.08
GLI3-203ENST00000437480 CCDC141Q6ZP82 1450 aa34.29■■■■□ 3.08
GLI3-203ENST00000437480 DNMT1P26358 1616 aaKnown RBP34.29■■■■□ 3.08
GLI3-203ENST00000437480 SCAF1Q9H7N4 1312 aaKnown RBP34.27■■■■□ 3.08
GLI3-203ENST00000437480 PZPP20742 1482 aa34.27■■■■□ 3.08
GLI3-203ENST00000437480 FAM135AQ9P2D6 1515 aa34.26■■■■□ 3.08
GLI3-203ENST00000437480 KDM5DQ9BY66 1539 aa34.25■■■■□ 3.07
GLI3-203ENST00000437480 TOM1O60784 492 aa34.25■■■■□ 3.07
GLI3-203ENST00000437480 ANKLE2Q86XL3 938 aa34.25■■■■□ 3.07
GLI3-203ENST00000437480 THEMISQ8N1K5 641 aaPredicted RBP34.23■■■■□ 3.07
GLI3-203ENST00000437480 CPS1P31327 1500 aa34.22■■■■□ 3.07
GLI3-203ENST00000437480 PIP4K2BP78356 416 aa34.21■■■■□ 3.07
GLI3-203ENST00000437480 CAMSAP2Q08AD1 1489 aa34.2■■■■□ 3.07
GLI3-203ENST00000437480 NCOA2Q15596 1464 aa34.2■■■■□ 3.07
GLI3-203ENST00000437480 TSPY4P0CV99 314 aa34.2■■■■□ 3.07
GLI3-203ENST00000437480 TSPY10P0CW01 314 aa34.2■■■■□ 3.07
GLI3-203ENST00000437480 SHANK2Q9UPX8 1470 aa34.2■■■■□ 3.06
GLI3-203ENST00000437480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.18■■■■□ 3.06
GLI3-203ENST00000437480 MIA2Q96PC5 1412 aa34.18■■■■□ 3.06
GLI3-203ENST00000437480 HSPA1LP34931 641 aa34.17■■■■□ 3.06
GLI3-203ENST00000437480 NLRP1Q9C000 1473 aa34.16■■■■□ 3.06
GLI3-203ENST00000437480 NEURL4Q96JN8 1562 aa34.15■■■■□ 3.06
GLI3-203ENST00000437480 NPHP4O75161 1426 aaPredicted RBP34.1■■■■□ 3.05
GLI3-203ENST00000437480 UGGT1Q9NYU2 1555 aa34.09■■■■□ 3.05
GLI3-203ENST00000437480 POLR1AO95602 1720 aaPredicted RBP34.08■■■■□ 3.05
GLI3-203ENST00000437480 ARHGEF5Q12774 1597 aa34.06■■■■□ 3.04
GLI3-203ENST00000437480 MED14O60244 1454 aa34.05■■■■□ 3.04
GLI3-203ENST00000437480 VWDEQ8N2E2 1590 aa34.02■■■■□ 3.04
GLI3-203ENST00000437480 MED1Q15648 1581 aaPredicted RBP33.98■■■■□ 3.03
GLI3-203ENST00000437480 DEPDC5O75140 1603 aa33.98■■■■□ 3.03
GLI3-203ENST00000437480 ABCC3O15438 1527 aa33.95■■■■□ 3.03
GLI3-203ENST00000437480 PHF23Q9BUL5 403 aaPredicted RBP33.94■■■■□ 3.02
GLI3-203ENST00000437480 LRRC9Q6ZRR7 1453 aa33.92■■■■□ 3.02
GLI3-203ENST00000437480 ERVK-7P63135 1459 aa33.91■■■■□ 3.02
GLI3-203ENST00000437480 RNF17Q9BXT8 1623 aaKnown RBP33.9■■■■□ 3.02
GLI3-203ENST00000437480 MAST1Q9Y2H9 1570 aa33.89■■■■□ 3.02
GLI3-203ENST00000437480 VPS8Q8N3P4 1428 aa33.87■■■■□ 3.01
GLI3-203ENST00000437480 IQGAP1P46940 1657 aa33.87■■■■□ 3.01
GLI3-203ENST00000437480 ZC3H13Q5T200 1668 aaKnown RBP33.87■■■■□ 3.01
GLI3-203ENST00000437480 LRRC7Q96NW7 1537 aa33.84■■■■□ 3.01
GLI3-203ENST00000437480 EIF2AK4Q9P2K8 1649 aaKnown RBP33.83■■■■□ 3.01
GLI3-203ENST00000437480 ALKQ9UM73 1620 aa33.82■■■■□ 3
GLI3-203ENST00000437480 MYOM3Q5VTT5 1437 aa33.81■■■■□ 3
GLI3-203ENST00000437480 SENP3Q9H4L4 574 aaPredicted RBP33.8■■■■□ 3
GLI3-203ENST00000437480 SCAF11Q99590 1463 aaKnown RBP33.8■■■■□ 3
GLI3-203ENST00000437480 KANK4Q5T7N3 995 aaPredicted RBP33.78■■■■□ 3
GLI3-203ENST00000437480 TXNDC2Q86VQ3 553 aa33.78■■■■□ 3
GLI3-203ENST00000437480 DUOX2Q9NRD8 1548 aa33.77■■■■□ 3
GLI3-203ENST00000437480 SYNMO15061 1565 aa33.77■■■■□ 3
GLI3-203ENST00000437480 MROH1Q8NDA8 1641 aa33.75■■■□□ 2.99
GLI3-203ENST00000437480 EID1Q9Y6B2 187 aa33.75■■■□□ 2.99
GLI3-203ENST00000437480 MAP3K1Q13233 1512 aa33.74■■■□□ 2.99
GLI3-203ENST00000437480 LTKP29376 864 aa33.73■■■□□ 2.99
GLI3-203ENST00000437480 KIF15Q9NS87 1388 aa33.72■■■□□ 2.99
GLI3-203ENST00000437480 ARHGAP31Q2M1Z3 1444 aa33.72■■■□□ 2.99
GLI3-203ENST00000437480 ARHGAP23Q9P227 1491 aa33.69■■■□□ 2.98
GLI3-203ENST00000437480 SLIT1O75093 1534 aa33.69■■■□□ 2.98
GLI3-203ENST00000437480 ERBINQ96RT1 1412 aa33.68■■■□□ 2.98
GLI3-203ENST00000437480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.67■■■□□ 2.98
GLI3-203ENST00000437480 RRP7BPQ9NSQ0 103 aa33.67■■■□□ 2.98
GLI3-203ENST00000437480 STAG3Q9UJ98 1225 aa33.67■■■□□ 2.98
GLI3-203ENST00000437480 UBR1Q8IWV7 1749 aa33.67■■■□□ 2.98
GLI3-203ENST00000437480 STRCP1A6NGW2 1772 aa33.67■■■□□ 2.98
GLI3-203ENST00000437480 KANK1Q14678 1352 aa33.64■■■□□ 2.98
GLI3-203ENST00000437480 LOC105371045A0A1W2PR82 267 aa33.64■■■□□ 2.98
GLI3-203ENST00000437480 CEP152O94986 1710 aa33.64■■■□□ 2.98
GLI3-203ENST00000437480 PRDM15P57071 1507 aaPredicted RBP33.63■■■□□ 2.97
GLI3-203ENST00000437480 ABCC5O15440 1437 aa33.62■■■□□ 2.97
GLI3-203ENST00000437480 TMEM2Q9UHN6 1383 aa33.61■■■□□ 2.97
GLI3-203ENST00000437480 APLP2Q06481 763 aa33.58■■■□□ 2.97
GLI3-203ENST00000437480 FAM135BQ49AJ0 1406 aa33.53■■■□□ 2.96
GLI3-203ENST00000437480 DAPK1P53355 1430 aa33.52■■■□□ 2.96
GLI3-203ENST00000437480 TMEM94Q12767 1356 aa33.51■■■□□ 2.96
GLI3-203ENST00000437480 KCNA6P17658 529 aa33.51■■■□□ 2.95
GLI3-203ENST00000437480 IDI1Q13907 227 aa33.51■■■□□ 2.95
GLI3-203ENST00000437480 ANKRD30AQ9BXX3 1397 aa33.5■■■□□ 2.95
GLI3-203ENST00000437480 CFAP65Q6ZU64 1925 aaKnown RBP33.49■■■□□ 2.95
GLI3-203ENST00000437480 EFCAB6Q5THR3 1501 aa33.48■■■□□ 2.95
GLI3-203ENST00000437480 RGS17Q9UGC6 210 aaPredicted RBP33.48■■■□□ 2.95
GLI3-203ENST00000437480 PIK3C2BO00750 1634 aa33.48■■■□□ 2.95
GLI3-203ENST00000437480 PTPN23Q9H3S7 1636 aa33.47■■■□□ 2.95
GLI3-203ENST00000437480 PROSER2Q86WR7 435 aaPredicted RBP33.46■■■□□ 2.95
GLI3-203ENST00000437480 CHIC2Q9UKJ5 165 aa33.46■■■□□ 2.95
GLI3-203ENST00000437480 LMTK2Q8IWU2 1503 aa33.45■■■□□ 2.95
GLI3-203ENST00000437480 SLC26A8Q96RN1 970 aa33.45■■■□□ 2.95
GLI3-203ENST00000437480 CROCC2H7BZ55 1655 aa33.43■■■□□ 2.94
GLI3-203ENST00000437480 FGD6Q6ZV73 1430 aa33.43■■■□□ 2.94
GLI3-203ENST00000437480 BCANQ96GW7 911 aa33.4■■■□□ 2.94
GLI3-203ENST00000437480 SLC52A1Q9NWF4 448 aa33.4■■■□□ 2.94
GLI3-203ENST00000437480 NOS1P29475 1434 aa33.38■■■□□ 2.93
GLI3-203ENST00000437480 KDM5AP29375 1690 aaKnown RBP33.37■■■□□ 2.93
GLI3-203ENST00000437480 RBM33Q96EV2 1170 aaKnown RBP33.36■■■□□ 2.93
GLI3-203ENST00000437480 XIRP1Q702N8 1843 aaKnown RBP33.35■■■□□ 2.93
GLI3-203ENST00000437480 TET3O43151 1660 aa33.33■■■□□ 2.93
GLI3-203ENST00000437480 NKTRP30414 1462 aaKnown RBP33.33■■■□□ 2.93
GLI3-203ENST00000437480 MSH6P52701 1360 aa33.33■■■□□ 2.93
GLI3-203ENST00000437480 ADGRB3O60242 1522 aa33.32■■■□□ 2.92
GLI3-203ENST00000437480 HDGFP51858 240 aaKnown RBP33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms